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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:BNIP3L-XPA (FusionGDB2 ID:HG665TG7507) |
Fusion Gene Summary for BNIP3L-XPA |
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Fusion gene information | Fusion gene name: BNIP3L-XPA | Fusion gene ID: hg665tg7507 | Hgene | Tgene | Gene symbol | BNIP3L | XPA | Gene ID | 665 | 7507 |
Gene name | BCL2 interacting protein 3 like | XPA, DNA damage recognition and repair factor | |
Synonyms | BNIP3a|NIX | XP1|XPAC | |
Cytomap | ('BNIP3L')('XPA') 8p21.2 | 9q22.33 | |
Type of gene | protein-coding | protein-coding | |
Description | BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-likeBCL2/adenovirus E1B 19 kDa protein-interacting protein 3ABCL2/adenovirus E1B 19-kd protein-interacting protein 3aBCL2/adenovirus E1B 19kDa interacting protein 3 likeNIP-3-like protein XNIP3 | DNA repair protein complementing XP-A cellsxeroderma pigmentosum group A-complementing proteinxeroderma pigmentosum, complementation group A | |
Modification date | 20200313 | 20200322 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000521254, ENST00000380629, ENST00000518611, ENST00000520409, ENST00000523515, | ||
Fusion gene scores | * DoF score | 7 X 7 X 2=98 | 5 X 5 X 2=50 |
# samples | 9 | 5 | |
** MAII score | log2(9/98*10)=-0.122856747785533 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/50*10)=0 | |
Context | PubMed: BNIP3L [Title/Abstract] AND XPA [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | BNIP3L(26265892)-XPA(100437869), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. | BNIP3L-XPA seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. BNIP3L-XPA seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. BNIP3L-XPA seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. BNIP3L-XPA seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | BNIP3L | GO:0043065 | positive regulation of apoptotic process | 9973195 |
Hgene | BNIP3L | GO:0043066 | negative regulation of apoptotic process | 10381623 |
Hgene | BNIP3L | GO:0051607 | defense response to virus | 9973195 |
Tgene | XPA | GO:0006281 | DNA repair | 1601884 |
Tgene | XPA | GO:0009650 | UV protection | 1601884 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | KIRC | TCGA-BP-4344-01A | BNIP3L | chr8 | 26265892 | + | XPA | chr9 | 100437869 | - |
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Fusion Gene ORF analysis for BNIP3L-XPA |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
3UTR-3CDS | ENST00000521254 | ENST00000375128 | BNIP3L | chr8 | 26265892 | + | XPA | chr9 | 100437869 | - |
3UTR-5UTR | ENST00000521254 | ENST00000485042 | BNIP3L | chr8 | 26265892 | + | XPA | chr9 | 100437869 | - |
5CDS-5UTR | ENST00000380629 | ENST00000485042 | BNIP3L | chr8 | 26265892 | + | XPA | chr9 | 100437869 | - |
5CDS-5UTR | ENST00000518611 | ENST00000485042 | BNIP3L | chr8 | 26265892 | + | XPA | chr9 | 100437869 | - |
5CDS-5UTR | ENST00000520409 | ENST00000485042 | BNIP3L | chr8 | 26265892 | + | XPA | chr9 | 100437869 | - |
5CDS-5UTR | ENST00000523515 | ENST00000485042 | BNIP3L | chr8 | 26265892 | + | XPA | chr9 | 100437869 | - |
In-frame | ENST00000380629 | ENST00000375128 | BNIP3L | chr8 | 26265892 | + | XPA | chr9 | 100437869 | - |
In-frame | ENST00000518611 | ENST00000375128 | BNIP3L | chr8 | 26265892 | + | XPA | chr9 | 100437869 | - |
In-frame | ENST00000520409 | ENST00000375128 | BNIP3L | chr8 | 26265892 | + | XPA | chr9 | 100437869 | - |
In-frame | ENST00000523515 | ENST00000375128 | BNIP3L | chr8 | 26265892 | + | XPA | chr9 | 100437869 | - |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000380629 | BNIP3L | chr8 | 26265892 | + | ENST00000375128 | XPA | chr9 | 100437869 | - | 1523 | 844 | 71 | 904 | 277 |
ENST00000523515 | BNIP3L | chr8 | 26265892 | + | ENST00000375128 | XPA | chr9 | 100437869 | - | 1291 | 612 | 19 | 672 | 217 |
ENST00000520409 | BNIP3L | chr8 | 26265892 | + | ENST00000375128 | XPA | chr9 | 100437869 | - | 1272 | 593 | 12 | 653 | 213 |
ENST00000518611 | BNIP3L | chr8 | 26265892 | + | ENST00000375128 | XPA | chr9 | 100437869 | - | 1346 | 667 | 176 | 727 | 183 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000380629 | ENST00000375128 | BNIP3L | chr8 | 26265892 | + | XPA | chr9 | 100437869 | - | 0.001758601 | 0.9982414 |
ENST00000523515 | ENST00000375128 | BNIP3L | chr8 | 26265892 | + | XPA | chr9 | 100437869 | - | 0.003772226 | 0.99622774 |
ENST00000520409 | ENST00000375128 | BNIP3L | chr8 | 26265892 | + | XPA | chr9 | 100437869 | - | 0.004320527 | 0.99567956 |
ENST00000518611 | ENST00000375128 | BNIP3L | chr8 | 26265892 | + | XPA | chr9 | 100437869 | - | 0.006152366 | 0.99384767 |
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Fusion Genomic Features for BNIP3L-XPA |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
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Fusion Protein Features for BNIP3L-XPA |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr8:26265892/chr9:100437869) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | BNIP3L | chr8:26265892 | chr9:100437869 | ENST00000380629 | + | 5 | 6 | 126_148 | 203 | 220.0 | Motif | Note=BH3 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | BNIP3L | chr8:26265892 | chr9:100437869 | ENST00000380629 | + | 5 | 6 | 188_208 | 203 | 220.0 | Transmembrane | Helical |
Tgene | XPA | chr8:26265892 | chr9:100437869 | ENST00000375128 | 4 | 6 | 78_84 | 224 | 274.0 | Compositional bias | Note=Poly-Glu | |
Tgene | XPA | chr8:26265892 | chr9:100437869 | ENST00000375128 | 4 | 6 | 26_47 | 224 | 274.0 | Motif | Nuclear localization signal | |
Tgene | XPA | chr8:26265892 | chr9:100437869 | ENST00000375128 | 4 | 6 | 105_129 | 224 | 274.0 | Zinc finger | . |
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Fusion Gene Sequence for BNIP3L-XPA |
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>9994_9994_1_BNIP3L-XPA_BNIP3L_chr8_26265892_ENST00000380629_XPA_chr9_100437869_ENST00000375128_length(transcript)=1523nt_BP=844nt GCGCGTCAGCCTGACTCGAGCGTCTCCACGTCCGGGGCCCGCAGGGGAGCGCCCCTGCCCCGTCCGGTCGCTTGTTGTGTTGTCATCACG TGGCCTGGGCGGGCCCTGACGTCAGGGGCAGGGGAGGGACGGCGCAGGCGCAGAAAAGGGGGCGGCGGACTCGGCTTGTTGTGTTGCTGC CTGAGTGCCGGAGACGGTCCTGCTGCTGCCGCAGTCCTGCCAGCTGTCCGACAATGTCGTCCCACCTAGTCGAGCCGCCGCCGCCCCTGC ACAACAACAACAACAACTGCGAGGAAAATGAGCAGTCTCTGCCCCCGCCGGCCGGCCTCAACAGTTCCTGGGTGGAGCTACCCATGAACA GCAGCAATGGCAATGATAATGGCAATGGGAAAAATGGGGGGCTGGAACACGTACCATCCTCATCCTCCATCCACAATGGAGACATGGAGA AGATTCTTTTGGATGCACAACATGAATCAGGACAGAGTAGTTCCAGAGGCAGTTCTCACTGTGACAGCCCTTCGCCACAAGAAGATGGGC AGATCATGTTTGATGTGGAAATGCACACCAGCAGGGACCATAGCTCTCAGTCAGAAGAAGAAGTTGTAGAAGGAGAGAAGGAAGTCGAGG CTTTGAAGAAAAGTGCGGACTGGGTATCAGACTGGTCCAGTAGACCCGAAAACATTCCACCCAAGGAGTTCCACTTCAGACACCCTAAAC GTTCTGTGTCTTTAAGCATGAGGAAAAGTGGAGCCATGAAGAAAGGGGGTATTTTCTCCGCAGAATTTCTGAAGGTGTTCATTCCATCTC TCTTCCTTTCTCATGTTTTGGCTTTGGGGCTAGGAATTGCGGCGAGCAGTAAGAAGCAGCGTGTGGAAAAGGGAGACGATTGTTCATCAA CATGAGTATGGACCAGAAGAAAACCTAGAAGATGACATGTACCGTAAGACTTGTACTATGTGTGGCCATGAACTGACATATGAAAAAATG TGATTTTTTAGTTCAGTGACCTGTTTTATAGAATTTTATATTTAAATAAAGGAAATTTAGATTGGTCCTTTTCAAAATTCAAAAAAAAAA GCAACATCTTCATAGATGAATGAAACCCTTGTATAAGTAATACTTCAGTAATAATTATGTATGTTATGGCTTAAAAGCAAGTTTCAGTGA AGGTCACCTGGCCTGGTTGTGTGCACAATGTCATGTCTGTGATTGCCTTCTTACAACAGAGATGGGAGCTGAGTGCTAGAGTAGGTGCAG AAGTGGTAGGTCAGCTACAAATTTGAGGACAAGATACCAAGGCAAACCCTAGATTGGGGTAGAGGGAAAAGGGTTCAACAAAGGCTGAAC TGGATTCTTAACCAAGAAACAAATAATAGCAATGGTGGTGCACCACTGTACCCCAGGTTCTAGTCATGTGTTTTTTAGGACGATTTCTGT CTCCACGATGGTGGAAACAGTGGGGAACTACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGAGTTGTACGAGTCTGA >9994_9994_1_BNIP3L-XPA_BNIP3L_chr8_26265892_ENST00000380629_XPA_chr9_100437869_ENST00000375128_length(amino acids)=277AA_BP=251 MLCCHHVAWAGPDVRGRGGTAQAQKRGRRTRLVVLLPECRRRSCCCRSPASCPTMSSHLVEPPPPLHNNNNNCEENEQSLPPPAGLNSSW VELPMNSSNGNDNGNGKNGGLEHVPSSSSIHNGDMEKILLDAQHESGQSSSRGSSHCDSPSPQEDGQIMFDVEMHTSRDHSSQSEEEVVE GEKEVEALKKSADWVSDWSSRPENIPPKEFHFRHPKRSVSLSMRKSGAMKKGGIFSAEFLKVFIPSLFLSHVLALGLGIAASSKKQRVEK GDDCSST -------------------------------------------------------------- >9994_9994_2_BNIP3L-XPA_BNIP3L_chr8_26265892_ENST00000518611_XPA_chr9_100437869_ENST00000375128_length(transcript)=1346nt_BP=667nt GTGGCTCCACCCCTTCAACTTTTTGTCCAAGAAAACTTTTCGTGTTTGCCTGTAGCTGATGTGCAGTTGTTTCTGCTCCCAAATCAACAG GGTTTAATGAAAACCCTAGAAAGTAGAAACCCGTGGGAGAGAAAAGAAAAAAGACAAGTTCACAAGGTTCCTGGGTGGAGCTACCCATGA ACAGCAGCAATGGCAATGATAATGGCAATGGGAAAAATGGGGGGCTGGAACACGTACCATCCTCATCCTCCATCCACAATGGAGACATGG AGAAGATTCTTTTGGATGCACAACATGAATCAGGACAGAGTAGTTCCAGAGGCAGTTCTCACTGTGACAGCCCTTCGCCACAAGAAGATG GGCAGATCATGTTTGATGTGGAAATGCACACCAGCAGGGACCATAGCTCTCAGTCAGAAGAAGAAGTTGTAGAAGGAGAGAAGGAAGTCG AGGCTTTGAAGAAAAGTGCGGACTGGGTATCAGACTGGTCCAGTAGACCCGAAAACATTCCACCCAAGGAGTTCCACTTCAGACACCCTA AACGTTCTGTGTCTTTAAGCATGAGGAAAAGTGGAGCCATGAAGAAAGGGGGTATTTTCTCCGCAGAATTTCTGAAGGTGTTCATTCCAT CTCTCTTCCTTTCTCATGTTTTGGCTTTGGGGCTAGGAATTGCGGCGAGCAGTAAGAAGCAGCGTGTGGAAAAGGGAGACGATTGTTCAT CAACATGAGTATGGACCAGAAGAAAACCTAGAAGATGACATGTACCGTAAGACTTGTACTATGTGTGGCCATGAACTGACATATGAAAAA ATGTGATTTTTTAGTTCAGTGACCTGTTTTATAGAATTTTATATTTAAATAAAGGAAATTTAGATTGGTCCTTTTCAAAATTCAAAAAAA AAAGCAACATCTTCATAGATGAATGAAACCCTTGTATAAGTAATACTTCAGTAATAATTATGTATGTTATGGCTTAAAAGCAAGTTTCAG TGAAGGTCACCTGGCCTGGTTGTGTGCACAATGTCATGTCTGTGATTGCCTTCTTACAACAGAGATGGGAGCTGAGTGCTAGAGTAGGTG CAGAAGTGGTAGGTCAGCTACAAATTTGAGGACAAGATACCAAGGCAAACCCTAGATTGGGGTAGAGGGAAAAGGGTTCAACAAAGGCTG AACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGTGGTGCACCACTGTACCCCAGGTTCTAGTCATGTGTTTTTTAGGACGATTTC TGTCTCCACGATGGTGGAAACAGTGGGGAACTACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGAGTTGTACGAGTCTGA >9994_9994_2_BNIP3L-XPA_BNIP3L_chr8_26265892_ENST00000518611_XPA_chr9_100437869_ENST00000375128_length(amino acids)=183AA_BP=157 MNSSNGNDNGNGKNGGLEHVPSSSSIHNGDMEKILLDAQHESGQSSSRGSSHCDSPSPQEDGQIMFDVEMHTSRDHSSQSEEEVVEGEKE VEALKKSADWVSDWSSRPENIPPKEFHFRHPKRSVSLSMRKSGAMKKGGIFSAEFLKVFIPSLFLSHVLALGLGIAASSKKQRVEKGDDC SST -------------------------------------------------------------- >9994_9994_3_BNIP3L-XPA_BNIP3L_chr8_26265892_ENST00000520409_XPA_chr9_100437869_ENST00000375128_length(transcript)=1272nt_BP=593nt CTCTGTTGCCTCCTGGGGTCTTGGGCCCGGGGCCGTTTGGGCTCGCGGTCCGGGAGCGGCGCGGGTAGCGCGGATCCCCCTGGTTCCTGG GTGGAGCTACCCATGAACAGCAGCAATGGCAATGATAATGGCAATGGGAAAAATGGGGGGCTGGAACACGTACCATCCTCATCCTCCATC CACAATGGAGACATGGAGAAGATTCTTTTGGATGCACAACATGAATCAGGACAGAGTAGTTCCAGAGGCAGTTCTCACTGTGACAGCCCT TCGCCACAAGAAGATGGGCAGATCATGTTTGATGTGGAAATGCACACCAGCAGGGACCATAGCTCTCAGTCAGAAGAAGAAGTTGTAGAA GGAGAGAAGGAAGTCGAGGCTTTGAAGAAAAGTGCGGACTGGGTATCAGACTGGTCCAGTAGACCCGAAAACATTCCACCCAAGGAGTTC CACTTCAGACACCCTAAACGTTCTGTGTCTTTAAGCATGAGGAAAAGTGGAGCCATGAAGAAAGGGGGTATTTTCTCCGCAGAATTTCTG AAGGTGTTCATTCCATCTCTCTTCCTTTCTCATGTTTTGGCTTTGGGGCTAGGAATTGCGGCGAGCAGTAAGAAGCAGCGTGTGGAAAAG GGAGACGATTGTTCATCAACATGAGTATGGACCAGAAGAAAACCTAGAAGATGACATGTACCGTAAGACTTGTACTATGTGTGGCCATGA ACTGACATATGAAAAAATGTGATTTTTTAGTTCAGTGACCTGTTTTATAGAATTTTATATTTAAATAAAGGAAATTTAGATTGGTCCTTT TCAAAATTCAAAAAAAAAAGCAACATCTTCATAGATGAATGAAACCCTTGTATAAGTAATACTTCAGTAATAATTATGTATGTTATGGCT TAAAAGCAAGTTTCAGTGAAGGTCACCTGGCCTGGTTGTGTGCACAATGTCATGTCTGTGATTGCCTTCTTACAACAGAGATGGGAGCTG AGTGCTAGAGTAGGTGCAGAAGTGGTAGGTCAGCTACAAATTTGAGGACAAGATACCAAGGCAAACCCTAGATTGGGGTAGAGGGAAAAG GGTTCAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGTGGTGCACCACTGTACCCCAGGTTCTAGTCATGTGT TTTTTAGGACGATTTCTGTCTCCACGATGGTGGAAACAGTGGGGAACTACTGCTGGAAAAAGCCCTAATAGCAGAAATAAACATTGAGTT GTACGAGTCTGA >9994_9994_3_BNIP3L-XPA_BNIP3L_chr8_26265892_ENST00000520409_XPA_chr9_100437869_ENST00000375128_length(amino acids)=213AA_BP=187 MGSWARGRLGSRSGSGAGSADPPGSWVELPMNSSNGNDNGNGKNGGLEHVPSSSSIHNGDMEKILLDAQHESGQSSSRGSSHCDSPSPQE DGQIMFDVEMHTSRDHSSQSEEEVVEGEKEVEALKKSADWVSDWSSRPENIPPKEFHFRHPKRSVSLSMRKSGAMKKGGIFSAEFLKVFI PSLFLSHVLALGLGIAASSKKQRVEKGDDCSST -------------------------------------------------------------- >9994_9994_4_BNIP3L-XPA_BNIP3L_chr8_26265892_ENST00000523515_XPA_chr9_100437869_ENST00000375128_length(transcript)=1291nt_BP=612nt CTGTCAAGAGGAGGGGCGCCTGCCTTGCTCCGGGCCTCTCTGTTGCCTCCTGGGGTCTTGGGCCCGGGGCCGTTTGGGCTCGCGGTCCGG GAGCGGCGCGGGTTCCTGGGTGGAGCTACCCATGAACAGCAGCAATGGCAATGATAATGGCAATGGGAAAAATGGGGGGCTGGAACACGT ACCATCCTCATCCTCCATCCACAATGGAGACATGGAGAAGATTCTTTTGGATGCACAACATGAATCAGGACAGAGTAGTTCCAGAGGCAG TTCTCACTGTGACAGCCCTTCGCCACAAGAAGATGGGCAGATCATGTTTGATGTGGAAATGCACACCAGCAGGGACCATAGCTCTCAGTC AGAAGAAGAAGTTGTAGAAGGAGAGAAGGAAGTCGAGGCTTTGAAGAAAAGTGCGGACTGGGTATCAGACTGGTCCAGTAGACCCGAAAA CATTCCACCCAAGGAGTTCCACTTCAGACACCCTAAACGTTCTGTGTCTTTAAGCATGAGGAAAAGTGGAGCCATGAAGAAAGGGGGTAT TTTCTCCGCAGAATTTCTGAAGGTGTTCATTCCATCTCTCTTCCTTTCTCATGTTTTGGCTTTGGGGCTAGGAATTGCGGCGAGCAGTAA GAAGCAGCGTGTGGAAAAGGGAGACGATTGTTCATCAACATGAGTATGGACCAGAAGAAAACCTAGAAGATGACATGTACCGTAAGACTT GTACTATGTGTGGCCATGAACTGACATATGAAAAAATGTGATTTTTTAGTTCAGTGACCTGTTTTATAGAATTTTATATTTAAATAAAGG AAATTTAGATTGGTCCTTTTCAAAATTCAAAAAAAAAAGCAACATCTTCATAGATGAATGAAACCCTTGTATAAGTAATACTTCAGTAAT AATTATGTATGTTATGGCTTAAAAGCAAGTTTCAGTGAAGGTCACCTGGCCTGGTTGTGTGCACAATGTCATGTCTGTGATTGCCTTCTT ACAACAGAGATGGGAGCTGAGTGCTAGAGTAGGTGCAGAAGTGGTAGGTCAGCTACAAATTTGAGGACAAGATACCAAGGCAAACCCTAG ATTGGGGTAGAGGGAAAAGGGTTCAACAAAGGCTGAACTGGATTCTTAACCAAGAAACAAATAATAGCAATGGTGGTGCACCACTGTACC CCAGGTTCTAGTCATGTGTTTTTTAGGACGATTTCTGTCTCCACGATGGTGGAAACAGTGGGGAACTACTGCTGGAAAAAGCCCTAATAG CAGAAATAAACATTGAGTTGTACGAGTCTGA >9994_9994_4_BNIP3L-XPA_BNIP3L_chr8_26265892_ENST00000523515_XPA_chr9_100437869_ENST00000375128_length(amino acids)=217AA_BP=191 MPCSGPLCCLLGSWARGRLGSRSGSGAGSWVELPMNSSNGNDNGNGKNGGLEHVPSSSSIHNGDMEKILLDAQHESGQSSSRGSSHCDSP SPQEDGQIMFDVEMHTSRDHSSQSEEEVVEGEKEVEALKKSADWVSDWSSRPENIPPKEFHFRHPKRSVSLSMRKSGAMKKGGIFSAEFL KVFIPSLFLSHVLALGLGIAASSKKQRVEKGDDCSST -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for BNIP3L-XPA |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Tgene | XPA | chr8:26265892 | chr9:100437869 | ENST00000375128 | 4 | 6 | 4_97 | 224.33333333333334 | 274.0 | CEP164 and required for UV resistance |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for BNIP3L-XPA |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for BNIP3L-XPA |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | C0268135 | Xeroderma pigmentosum, group A | 17 | CLINGEN;GENOMICS_ENGLAND;UNIPROT | |
Tgene | C0007114 | Malignant neoplasm of skin | 2 | CTD_human | |
Tgene | C0037286 | Skin Neoplasms | 2 | CTD_human | |
Tgene | C1449861 | Micronuclei, Chromosome-Defective | 2 | CTD_human | |
Tgene | C1449862 | Micronuclei, Genotoxicant-Induced | 2 | CTD_human | |
Tgene | C0021841 | Intestinal Neoplasms | 1 | CTD_human | |
Tgene | C0023903 | Liver neoplasms | 1 | CTD_human | |
Tgene | C0043346 | Xeroderma Pigmentosum | 1 | CTD_human | |
Tgene | C0345904 | Malignant neoplasm of liver | 1 | CTD_human | |
Tgene | C0346627 | Intestinal Cancer | 1 | CTD_human | |
Tgene | C1368275 | Pigmented Basal Cell Carcinoma | 1 | CTD_human | |
Tgene | C3714756 | Intellectual Disability | 1 | GENOMICS_ENGLAND | |
Tgene | C4721806 | Carcinoma, Basal Cell | 1 | CTD_human |