Fusion Gene Studies
in Kim Lab

FusionBase FusionGDB FusionGDB2 FusionPDB FusionNeoAntigen FusionAI FusionNW FGviewer Publication Contact
FusionGDB Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
leaf

Fusion Gene Summary

leaf

Fusion Gene ORF analysis

leaf

Fusion Genomic Features

leaf

Fusion Protein Features

leaf

Fusion Gene Sequence

leaf

Fusion Gene PPI analysis

leaf

Related Drugs

leaf

Related Diseases

Fusion gene:CACNA1D-PRKCD (FusionGDB2 ID:HG776TG5580)

Fusion Gene Summary for CACNA1D-PRKCD

check button Fusion gene summary
Fusion gene informationFusion gene name: CACNA1D-PRKCD
Fusion gene ID: hg776tg5580
HgeneTgene
Gene symbol

CACNA1D

PRKCD

Gene ID

776

5580

Gene namecalcium voltage-gated channel subunit alpha1 Dprotein kinase C delta
SynonymsCACH3|CACN4|CACNL1A2|CCHL1A2|Cav1.3|PASNA|SANDDALPS3|CVID9|MAY1|PKCD|nPKC-delta
Cytomap('CACNA1D')('PRKCD')

3p21.1

3p21.1

Type of geneprotein-codingprotein-coding
Descriptionvoltage-dependent L-type calcium channel subunit alpha-1Dcalcium channel, L type, alpha-1 polypeptidecalcium channel, neuroendocrine/brain-type, alpha 1 subunitcalcium channel, voltage-dependent, L type, alpha 1D subunitvoltage-gated calcium channel aprotein kinase C delta typeprotein kinase C delta VIIItyrosine-protein kinase PRKCD
Modification date2020031320200313
UniProtAcc..
Ensembl transtripts involved in fusion geneENST00000288139, ENST00000350061, 
ENST00000422281, ENST00000498251, 
ENST00000540742, ENST00000544977, 
Fusion gene scores* DoF score11 X 9 X 5=4957 X 7 X 5=245
# samples 157
** MAII scorelog2(15/495*10)=-1.72246602447109
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(7/245*10)=-1.8073549220576
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: CACNA1D [Title/Abstract] AND PRKCD [Title/Abstract] AND fusion [Title/Abstract]

Most frequent breakpointCACNA1D(53535747)-PRKCD(53217468), # samples:2
Anticipated loss of major functional domain due to fusion event.CACNA1D-PRKCD seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
CACNA1D-PRKCD seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF.
CACNA1D-PRKCD seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
CACNA1D-PRKCD seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneCACNA1D

GO:0006816

calcium ion transport

11160515

HgeneCACNA1D

GO:0051928

positive regulation of calcium ion transport

1309651

HgeneCACNA1D

GO:0070509

calcium ion import

1309651

TgenePRKCD

GO:0006468

protein phosphorylation

10713049|16611985

TgenePRKCD

GO:0006915

apoptotic process

10770950

TgenePRKCD

GO:0016572

histone phosphorylation

19059439

TgenePRKCD

GO:0018105

peptidyl-serine phosphorylation

18285462

TgenePRKCD

GO:0018107

peptidyl-threonine phosphorylation

10770950

TgenePRKCD

GO:0032147

activation of protein kinase activity

10713049

TgenePRKCD

GO:0042119

neutrophil activation

10770950

TgenePRKCD

GO:0070301

cellular response to hydrogen peroxide

10713049

TgenePRKCD

GO:0071447

cellular response to hydroperoxide

19059439

TgenePRKCD

GO:1904385

cellular response to angiotensin

18285462


check buttonFusion gene breakpoints across CACNA1D (5'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure
check buttonFusion gene breakpoints across PRKCD (3'-gene)
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure

check button Fusion gene information
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
SourceDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChimerDB4BRCATCGA-GM-A2DD-01ACACNA1Dchr3

53535747

-PRKCDchr3

53217468

+
ChimerDB4BRCATCGA-GM-A2DD-01ACACNA1Dchr3

53535747

+PRKCDchr3

53217468

+


Top

Fusion Gene ORF analysis for CACNA1D-PRKCD

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-intronENST00000288139ENST00000477794CACNA1Dchr3

53535747

+PRKCDchr3

53217468

+
5CDS-intronENST00000350061ENST00000477794CACNA1Dchr3

53535747

+PRKCDchr3

53217468

+
5CDS-intronENST00000422281ENST00000477794CACNA1Dchr3

53535747

+PRKCDchr3

53217468

+
In-frameENST00000288139ENST00000330452CACNA1Dchr3

53535747

+PRKCDchr3

53217468

+
In-frameENST00000288139ENST00000394729CACNA1Dchr3

53535747

+PRKCDchr3

53217468

+
In-frameENST00000350061ENST00000330452CACNA1Dchr3

53535747

+PRKCDchr3

53217468

+
In-frameENST00000350061ENST00000394729CACNA1Dchr3

53535747

+PRKCDchr3

53217468

+
In-frameENST00000422281ENST00000330452CACNA1Dchr3

53535747

+PRKCDchr3

53217468

+
In-frameENST00000422281ENST00000394729CACNA1Dchr3

53535747

+PRKCDchr3

53217468

+
intron-3CDSENST00000498251ENST00000330452CACNA1Dchr3

53535747

+PRKCDchr3

53217468

+
intron-3CDSENST00000498251ENST00000394729CACNA1Dchr3

53535747

+PRKCDchr3

53217468

+
intron-3CDSENST00000540742ENST00000330452CACNA1Dchr3

53535747

+PRKCDchr3

53217468

+
intron-3CDSENST00000540742ENST00000394729CACNA1Dchr3

53535747

+PRKCDchr3

53217468

+
intron-3CDSENST00000544977ENST00000330452CACNA1Dchr3

53535747

+PRKCDchr3

53217468

+
intron-3CDSENST00000544977ENST00000394729CACNA1Dchr3

53535747

+PRKCDchr3

53217468

+
intron-intronENST00000498251ENST00000477794CACNA1Dchr3

53535747

+PRKCDchr3

53217468

+
intron-intronENST00000540742ENST00000477794CACNA1Dchr3

53535747

+PRKCDchr3

53217468

+
intron-intronENST00000544977ENST00000477794CACNA1Dchr3

53535747

+PRKCDchr3

53217468

+

check buttonORFfinder result based on the fusion transcript sequence of in-frame fusion genes.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandSeq length
(transcript)		BP loci
(transcript)		Predicted start
(transcript)		Predicted stop
(transcript)		Seq length
(amino acids)
ENST00000350061CACNA1Dchr353535747+ENST00000394729PRKCDchr353217468+28199945112367618
ENST00000350061CACNA1Dchr353535747+ENST00000330452PRKCDchr353217468+26569945112367618
ENST00000288139CACNA1Dchr353535747+ENST00000394729PRKCDchr353217468+24266011181974618
ENST00000288139CACNA1Dchr353535747+ENST00000330452PRKCDchr353217468+22636011181974618
ENST00000422281CACNA1Dchr353535747+ENST00000394729PRKCDchr353217468+230848301856618
ENST00000422281CACNA1Dchr353535747+ENST00000330452PRKCDchr353217468+214548301856618

check buttonDeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated.
HenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrandNo-coding scoreCoding score
ENST00000350061ENST00000394729CACNA1Dchr353535747+PRKCDchr353217468+0.0079556660.9920443
ENST00000350061ENST00000330452CACNA1Dchr353535747+PRKCDchr353217468+0.011496450.9885035
ENST00000288139ENST00000394729CACNA1Dchr353535747+PRKCDchr353217468+0.0091619450.990838
ENST00000288139ENST00000330452CACNA1Dchr353535747+PRKCDchr353217468+0.0132596060.9867404
ENST00000422281ENST00000394729CACNA1Dchr353535747+PRKCDchr353217468+0.0082865020.9917135
ENST00000422281ENST00000330452CACNA1Dchr353535747+PRKCDchr353217468+0.0124370960.9875629

Top

Fusion Genomic Features for CACNA1D-PRKCD


check buttonFusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints.
HgeneHchrHbpHstrandTgeneTchrTbpTstrand1-pp (fusion gene breakpoint)
CACNA1Dchr353535747+PRKCDchr353217467+0.0135051620.9864949
CACNA1Dchr353535747+PRKCDchr353217467+0.0135051620.9864949

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page.
genomic feature

check buttonDistribution of 44 human genomic features loci across 20kb length fusion breakpoint regions that are ovelapped with the top 1% feature importance score regions. More details are in help page.
genomic feature of top 1%

Top

Fusion Protein Features for CACNA1D-PRKCD


check button Four levels of functional features of fusion genes
Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr3:53535747/chr3:53217468)
- FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels.
- How to search
1. Put your fusion gene symbol.
2. Press the tab key until there will be shown the breakpoint information filled.
4. Go down and press 'Search' tab twice.
4. Go down to have the hyperlink of the search result.
5. Click the hyperlink.
6. See the FGviewer result for your fusion gene.
FGviewer

check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
..
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page


* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491_71612182.0Compositional biasNote=Poly-Met
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481_71612162.0Compositional biasNote=Poly-Met
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461_71612138.0Compositional biasNote=Poly-Met
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349146_1631612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491_1261612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348146_1631612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481_1261612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346146_1631612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461_1261612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349127_1451612182.0TransmembraneHelical%3B Name%3DS1 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348127_1451612162.0TransmembraneHelical%3B Name%3DS1 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346127_1451612138.0TransmembraneHelical%3B Name%3DS1 of repeat I
TgenePRKCDchr3:53535747chr3:53217468ENST00000330452719349_603219677.0DomainProtein kinase
TgenePRKCDchr3:53535747chr3:53217468ENST00000330452719604_675219677.0DomainAGC-kinase C-terminal
TgenePRKCDchr3:53535747chr3:53217468ENST00000394729618349_603219677.0DomainProtein kinase
TgenePRKCDchr3:53535747chr3:53217468ENST00000394729618604_675219677.0DomainAGC-kinase C-terminal
TgenePRKCDchr3:53535747chr3:53217468ENST00000330452719355_363219677.0Nucleotide bindingATP
TgenePRKCDchr3:53535747chr3:53217468ENST00000394729618355_363219677.0Nucleotide bindingATP
TgenePRKCDchr3:53535747chr3:53217468ENST00000330452719230_280219677.0Zinc fingerPhorbol-ester/DAG-type 2
TgenePRKCDchr3:53535747chr3:53217468ENST00000394729618230_280219677.0Zinc fingerPhorbol-ester/DAG-type 2

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491493_15041612182.0Calcium bindingOntology_term=ECO:0000250
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481493_15041612162.0Calcium bindingOntology_term=ECO:0000250
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461493_15041612138.0Calcium bindingOntology_term=ECO:0000250
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349653_6591612182.0Compositional biasNote=Poly-Leu
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349827_8381612182.0Compositional biasNote=Poly-Glu
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348653_6591612162.0Compositional biasNote=Poly-Leu
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348827_8381612162.0Compositional biasNote=Poly-Glu
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346653_6591612138.0Compositional biasNote=Poly-Leu
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346827_8381612138.0Compositional biasNote=Poly-Glu
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491075_11651612182.0RegionDihydropyridine binding
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491420_14861612182.0RegionDihydropyridine binding
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491432_14751612182.0RegionPhenylalkylamine binding
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349429_4461612182.0RegionBinding to the beta subunit
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481075_11651612162.0RegionDihydropyridine binding
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481420_14861612162.0RegionDihydropyridine binding
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481432_14751612162.0RegionPhenylalkylamine binding
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348429_4461612162.0RegionBinding to the beta subunit
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461075_11651612138.0RegionDihydropyridine binding
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461420_14861612138.0RegionDihydropyridine binding
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461432_14751612138.0RegionPhenylalkylamine binding
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346429_4461612138.0RegionBinding to the beta subunit
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349113_4091612182.0RepeatNote=I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491192_14671612182.0RepeatNote=IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349509_7551612182.0RepeatNote=II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349873_11551612182.0RepeatNote=III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348113_4091612162.0RepeatNote=I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481192_14671612162.0RepeatNote=IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348509_7551612162.0RepeatNote=II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348873_11551612162.0RepeatNote=III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346113_4091612138.0RepeatNote=I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461192_14671612138.0RepeatNote=IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346509_7551612138.0RepeatNote=II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346873_11551612138.0RepeatNote=III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491038_11271612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491149_12051612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491225_12391612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491260_12661612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491289_13131612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491334_13521612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491373_14391612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491465_21611612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349184_1951612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349215_2351612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349255_2731612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349294_3811612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349407_5231612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349544_5581612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349578_5851612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349605_6141612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349634_6521612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349674_7271612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349753_8861612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349906_9211612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349942_9531612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349973_9781612182.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349999_10171612182.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481038_11271612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481149_12051612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481225_12391612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481260_12661612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481289_13131612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481334_13521612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481373_14391612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481465_21611612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348184_1951612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348215_2351612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348255_2731612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348294_3811612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348407_5231612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348544_5581612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348578_5851612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348605_6141612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348634_6521612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348674_7271612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348753_8861612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348906_9211612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348942_9531612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348973_9781612162.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348999_10171612162.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461038_11271612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461149_12051612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461225_12391612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461260_12661612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461289_13131612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461334_13521612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461373_14391612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461465_21611612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346184_1951612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346215_2351612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346255_2731612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346294_3811612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346407_5231612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346544_5581612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346578_5851612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346605_6141612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346634_6521612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346674_7271612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346753_8861612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346906_9211612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346942_9531612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346973_9781612138.0Topological domainExtracellular
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346999_10171612138.0Topological domainCytoplasmic
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491018_10371612182.0TransmembraneHelical%3B Name%3DS5 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491128_11481612182.0TransmembraneHelical%3B Name%3DS6 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491206_12241612182.0TransmembraneHelical%3B Name%3DS1 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491240_12591612182.0TransmembraneHelical%3B Name%3DS2 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491267_12881612182.0TransmembraneHelical%3B Name%3DS3 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491314_13331612182.0TransmembraneHelical%3B Name%3DS4 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491353_13721612182.0TransmembraneHelical%3B Name%3DS5 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+3491440_14641612182.0TransmembraneHelical%3B Name%3DS6 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349164_1831612182.0TransmembraneHelical%3B Name%3DS2 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349196_2141612182.0TransmembraneHelical%3B Name%3DS3 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349236_2541612182.0TransmembraneHelical%3B Name%3DS4 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349274_2931612182.0TransmembraneHelical%3B Name%3DS5 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349382_4061612182.0TransmembraneHelical%3B Name%3DS6 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349524_5431612182.0TransmembraneHelical%3B Name%3DS1 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349559_5771612182.0TransmembraneHelical%3B Name%3DS2 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349586_6041612182.0TransmembraneHelical%3B Name%3DS3 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349615_6331612182.0TransmembraneHelical%3B Name%3DS4 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349653_6731612182.0TransmembraneHelical%3B Name%3DS5 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349728_7521612182.0TransmembraneHelical%3B Name%3DS6 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349887_9051612182.0TransmembraneHelical%3B Name%3DS1 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349922_9411612182.0TransmembraneHelical%3B Name%3DS2 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349954_9721612182.0TransmembraneHelical%3B Name%3DS3 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000288139+349979_9981612182.0TransmembraneHelical%3B Name%3DS4 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481018_10371612162.0TransmembraneHelical%3B Name%3DS5 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481128_11481612162.0TransmembraneHelical%3B Name%3DS6 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481206_12241612162.0TransmembraneHelical%3B Name%3DS1 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481240_12591612162.0TransmembraneHelical%3B Name%3DS2 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481267_12881612162.0TransmembraneHelical%3B Name%3DS3 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481314_13331612162.0TransmembraneHelical%3B Name%3DS4 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481353_13721612162.0TransmembraneHelical%3B Name%3DS5 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+3481440_14641612162.0TransmembraneHelical%3B Name%3DS6 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348164_1831612162.0TransmembraneHelical%3B Name%3DS2 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348196_2141612162.0TransmembraneHelical%3B Name%3DS3 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348236_2541612162.0TransmembraneHelical%3B Name%3DS4 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348274_2931612162.0TransmembraneHelical%3B Name%3DS5 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348382_4061612162.0TransmembraneHelical%3B Name%3DS6 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348524_5431612162.0TransmembraneHelical%3B Name%3DS1 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348559_5771612162.0TransmembraneHelical%3B Name%3DS2 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348586_6041612162.0TransmembraneHelical%3B Name%3DS3 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348615_6331612162.0TransmembraneHelical%3B Name%3DS4 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348653_6731612162.0TransmembraneHelical%3B Name%3DS5 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348728_7521612162.0TransmembraneHelical%3B Name%3DS6 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348887_9051612162.0TransmembraneHelical%3B Name%3DS1 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348922_9411612162.0TransmembraneHelical%3B Name%3DS2 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348954_9721612162.0TransmembraneHelical%3B Name%3DS3 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000350061+348979_9981612162.0TransmembraneHelical%3B Name%3DS4 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461018_10371612138.0TransmembraneHelical%3B Name%3DS5 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461128_11481612138.0TransmembraneHelical%3B Name%3DS6 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461206_12241612138.0TransmembraneHelical%3B Name%3DS1 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461240_12591612138.0TransmembraneHelical%3B Name%3DS2 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461267_12881612138.0TransmembraneHelical%3B Name%3DS3 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461314_13331612138.0TransmembraneHelical%3B Name%3DS4 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461353_13721612138.0TransmembraneHelical%3B Name%3DS5 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+3461440_14641612138.0TransmembraneHelical%3B Name%3DS6 of repeat IV
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346164_1831612138.0TransmembraneHelical%3B Name%3DS2 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346196_2141612138.0TransmembraneHelical%3B Name%3DS3 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346236_2541612138.0TransmembraneHelical%3B Name%3DS4 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346274_2931612138.0TransmembraneHelical%3B Name%3DS5 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346382_4061612138.0TransmembraneHelical%3B Name%3DS6 of repeat I
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346524_5431612138.0TransmembraneHelical%3B Name%3DS1 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346559_5771612138.0TransmembraneHelical%3B Name%3DS2 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346586_6041612138.0TransmembraneHelical%3B Name%3DS3 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346615_6331612138.0TransmembraneHelical%3B Name%3DS4 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346653_6731612138.0TransmembraneHelical%3B Name%3DS5 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346728_7521612138.0TransmembraneHelical%3B Name%3DS6 of repeat II
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346887_9051612138.0TransmembraneHelical%3B Name%3DS1 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346922_9411612138.0TransmembraneHelical%3B Name%3DS2 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346954_9721612138.0TransmembraneHelical%3B Name%3DS3 of repeat III
HgeneCACNA1Dchr3:53535747chr3:53217468ENST00000422281+346979_9981612138.0TransmembraneHelical%3B Name%3DS4 of repeat III
TgenePRKCDchr3:53535747chr3:53217468ENST000003304527191_106219677.0DomainC2
TgenePRKCDchr3:53535747chr3:53217468ENST000003947296181_106219677.0DomainC2
TgenePRKCDchr3:53535747chr3:53217468ENST00000330452719158_208219677.0Zinc fingerPhorbol-ester/DAG-type 1
TgenePRKCDchr3:53535747chr3:53217468ENST00000394729618158_208219677.0Zinc fingerPhorbol-ester/DAG-type 1


Top

Fusion Gene Sequence for CACNA1D-PRKCD


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones.
>12324_12324_1_CACNA1D-PRKCD_CACNA1D_chr3_53535747_ENST00000288139_PRKCD_chr3_53217468_ENST00000330452_length(transcript)=2263nt_BP=601nt
AGAATAAGGGCAGGGACCGCGGCTCCTACCTCTTGGTGATCCCCTTCCCCATTCCGCCCCCGCCTCAACGCCCAGCACAGTGCCCTGCAC
ACAGTAGTCGCTCAATAAATGTTCGTGGATGATGATGATGATGATGATGAAAAAAATGCAGCATCAACGGCAGCAGCAAGCGGACCACGC
GAACGAGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCAACTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCT
GTCTTGGCAAGCTGCAATCGATGCTGCTAGACAGGCCAAGGCTGCCCAAACTATGAGCACCTCTGCACCCCCACCTGTAGGATCTCTCTC
CCAAAGAAAACGTCAGCAATACGCCAAGAGCAAAAAACAGGGTAACTCGTCCAACAGCCGACCTGCCCGCGCCCTTTTCTGTTTATCACT
CAATAACCCCATCCGAAGAGCCTGCATTAGTATAGTGGAATGGAAACCATTTGACATATTTATATTATTGGCTATTTTTGCCAATTGTGT
GGCCTTAGCTATTTACATCCCATTCCCTGAAGATGATTCTAATTCAACAAATCATAACTTGTTCCAGAAAGAACGCTTCAACATCGACAT
GCCGCACCGCTTCAAGGTTCACAACTACATGAGCCCCACCTTCTGTGACCACTGCGGCAGCCTGCTCTGGGGACTGGTGAAGCAGGGATT
AAAGTGTGAAGACTGCGGCATGAATGTGCACCATAAATGCCGGGAGAAGGTGGCCAACCTCTGCGGCATCAACCAGAAGCTTTTGGCTGA
GGCCTTGAACCAAGTCACCCAGAGAGCCTCCCGGAGATCAGACTCAGCCTCCTCAGAGCCTGTTGGGATATATCAGGGTTTCGAGAAGAA
GACCGGAGTTGCTGGGGAGGACATGCAAGACAACAGTGGGACCTACGGCAAGATCTGGGAGGGCAGCAGCAAGTGCAACATCAACAACTT
CATCTTCCACAAGGTCCTGGGCAAAGGCAGCTTCGGGAAGGTGCTGCTTGGAGAGCTGAAGGGCAGAGGAGAGTACTTTGCCATCAAGGC
CCTCAAGAAGGATGTGGTCCTGATCGACGACGACGTGGAGTGCACCATGGTTGAGAAGCGGGTGCTGACACTTGCCGCAGAGAATCCCTT
TCTCACCCACCTCATCTGCACCTTCCAGACCAAGGACCACCTGTTCTTTGTGATGGAGTTCCTCAACGGGGGGGACCTGATGTACCACAT
CCAGGACAAAGGCCGCTTTGAACTCTACCGTGCCACGTTTTATGCCGCTGAGATAATGTGTGGACTGCAGTTTCTACACAGCAAGGGCAT
CATTTACAGGGACCTCAAACTGGACAATGTGCTGCTGGACCGGGATGGCCACATCAAGATTGCCGACTTTGGGATGTGCAAAGAGAACAT
ATTCGGGGAGAGCCGGGCCAGCACCTTCTGCGGCACCCCTGACTATATCGCCCCTGAGATCCTACAGGGCCTGAAGTACACATTCTCTGT
GGACTGGTGGTCTTTCGGGGTCCTTCTGTACGAGATGCTCATTGGCCAGTCCCCCTTCCATGGTGATGATGAGGATGAACTCTTCGAGTC
CATCCGTGTGGACACGCCACATTATCCCCGCTGGATCACCAAGGAGTCCAAGGACATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAA
GAGGCTGGGAGTGACCGGAAACATCAAAATCCACCCCTTCTTCAAGACCATAAACTGGACTCTGCTGGAAAAGCGGAGGTTGGAGCCACC
TTTCAGGCCCAAAGTGAAGTCACCCAGAGACTACAGTAACTTTGACCAGGAGTTCCTGAACGAGAAGGCGCGCCTCTCCTACAGCGACAA
GAACCTCATCGACTCCATGGACCAGTCTGCATTCGCTGGCTTCTCCTTTGTGAACCCCAAATTCGAGCACCTCCTGGAAGATTGAGGTTC
CTGGACAGATCAGGCTAGCCCTGCCCTCCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCTG
GCCCCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
CCTCTGCCTTCGGAGGGAAATTGTAAATCCTGTGTTTCATTACTTGAATGTAGTTATCTATTGAAAATATATATTATATACATAGACATA
TATATATATATAA

>12324_12324_1_CACNA1D-PRKCD_CACNA1D_chr3_53535747_ENST00000288139_PRKCD_chr3_53217468_ENST00000330452_length(amino acids)=618AA_BP=161
MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQPNSSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAK
SKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLFQKERFNIDMPHRFKVHNY
MSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCGINQKLLAEALNQVTQRASRRSDSASSEPVGIYQGFEKKTGVAGEDMQ
DNSGTYGKIWEGSSKCNINNFIFHKVLGKGSFGKVLLGELKGRGEYFAIKALKKDVVLIDDDVECTMVEKRVLTLAAENPFLTHLICTFQ
TKDHLFFVMEFLNGGDLMYHIQDKGRFELYRATFYAAEIMCGLQFLHSKGIIYRDLKLDNVLLDRDGHIKIADFGMCKENIFGESRASTF
CGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFEREPTKRLGVTGNIK
IHPFFKTINWTLLEKRRLEPPFRPKVKSPRDYSNFDQEFLNEKARLSYSDKNLIDSMDQSAFAGFSFVNPKFEHLLED

--------------------------------------------------------------
>12324_12324_2_CACNA1D-PRKCD_CACNA1D_chr3_53535747_ENST00000288139_PRKCD_chr3_53217468_ENST00000394729_length(transcript)=2426nt_BP=601nt
AGAATAAGGGCAGGGACCGCGGCTCCTACCTCTTGGTGATCCCCTTCCCCATTCCGCCCCCGCCTCAACGCCCAGCACAGTGCCCTGCAC
ACAGTAGTCGCTCAATAAATGTTCGTGGATGATGATGATGATGATGATGAAAAAAATGCAGCATCAACGGCAGCAGCAAGCGGACCACGC
GAACGAGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCAACTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCT
GTCTTGGCAAGCTGCAATCGATGCTGCTAGACAGGCCAAGGCTGCCCAAACTATGAGCACCTCTGCACCCCCACCTGTAGGATCTCTCTC
CCAAAGAAAACGTCAGCAATACGCCAAGAGCAAAAAACAGGGTAACTCGTCCAACAGCCGACCTGCCCGCGCCCTTTTCTGTTTATCACT
CAATAACCCCATCCGAAGAGCCTGCATTAGTATAGTGGAATGGAAACCATTTGACATATTTATATTATTGGCTATTTTTGCCAATTGTGT
GGCCTTAGCTATTTACATCCCATTCCCTGAAGATGATTCTAATTCAACAAATCATAACTTGTTCCAGAAAGAACGCTTCAACATCGACAT
GCCGCACCGCTTCAAGGTTCACAACTACATGAGCCCCACCTTCTGTGACCACTGCGGCAGCCTGCTCTGGGGACTGGTGAAGCAGGGATT
AAAGTGTGAAGACTGCGGCATGAATGTGCACCATAAATGCCGGGAGAAGGTGGCCAACCTCTGCGGCATCAACCAGAAGCTTTTGGCTGA
GGCCTTGAACCAAGTCACCCAGAGAGCCTCCCGGAGATCAGACTCAGCCTCCTCAGAGCCTGTTGGGATATATCAGGGTTTCGAGAAGAA
GACCGGAGTTGCTGGGGAGGACATGCAAGACAACAGTGGGACCTACGGCAAGATCTGGGAGGGCAGCAGCAAGTGCAACATCAACAACTT
CATCTTCCACAAGGTCCTGGGCAAAGGCAGCTTCGGGAAGGTGCTGCTTGGAGAGCTGAAGGGCAGAGGAGAGTACTTTGCCATCAAGGC
CCTCAAGAAGGATGTGGTCCTGATCGACGACGACGTGGAGTGCACCATGGTTGAGAAGCGGGTGCTGACACTTGCCGCAGAGAATCCCTT
TCTCACCCACCTCATCTGCACCTTCCAGACCAAGGACCACCTGTTCTTTGTGATGGAGTTCCTCAACGGGGGGGACCTGATGTACCACAT
CCAGGACAAAGGCCGCTTTGAACTCTACCGTGCCACGTTTTATGCCGCTGAGATAATGTGTGGACTGCAGTTTCTACACAGCAAGGGCAT
CATTTACAGGGACCTCAAACTGGACAATGTGCTGCTGGACCGGGATGGCCACATCAAGATTGCCGACTTTGGGATGTGCAAAGAGAACAT
ATTCGGGGAGAGCCGGGCCAGCACCTTCTGCGGCACCCCTGACTATATCGCCCCTGAGATCCTACAGGGCCTGAAGTACACATTCTCTGT
GGACTGGTGGTCTTTCGGGGTCCTTCTGTACGAGATGCTCATTGGCCAGTCCCCCTTCCATGGTGATGATGAGGATGAACTCTTCGAGTC
CATCCGTGTGGACACGCCACATTATCCCCGCTGGATCACCAAGGAGTCCAAGGACATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAA
GAGGCTGGGAGTGACCGGAAACATCAAAATCCACCCCTTCTTCAAGACCATAAACTGGACTCTGCTGGAAAAGCGGAGGTTGGAGCCACC
TTTCAGGCCCAAAGTGAAGTCACCCAGAGACTACAGTAACTTTGACCAGGAGTTCCTGAACGAGAAGGCGCGCCTCTCCTACAGCGACAA
GAACCTCATCGACTCCATGGACCAGTCTGCATTCGCTGGCTTCTCCTTTGTGAACCCCAAATTCGAGCACCTCCTGGAAGATTGAGGTTC
CTGGACAGATCAGGCTAGCCCTGCCCTCCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCTG
GCCCCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
CCTCTGCCTTCGGAGGGAAATTGTAAATCCTGTGTTTCATTACTTGAATGTAGTTATCTATTGAAAATATATATTATATACATAGACATA
TATATATATATAATAGGCTGTATATATTGCTCAGTAGAGAAAAACCATGGGGGACTGGTGATATGTTGATCTTTTTCAAAAAAATATATA
TATGACAAAAAAAAAAAAAAAGGAGCACAAGCTGTTTGAACCACCAGGTTTATTTGTGTGTCTAAATAAACACCAAATAGTACCAA

>12324_12324_2_CACNA1D-PRKCD_CACNA1D_chr3_53535747_ENST00000288139_PRKCD_chr3_53217468_ENST00000394729_length(amino acids)=618AA_BP=161
MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQPNSSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAK
SKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLFQKERFNIDMPHRFKVHNY
MSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCGINQKLLAEALNQVTQRASRRSDSASSEPVGIYQGFEKKTGVAGEDMQ
DNSGTYGKIWEGSSKCNINNFIFHKVLGKGSFGKVLLGELKGRGEYFAIKALKKDVVLIDDDVECTMVEKRVLTLAAENPFLTHLICTFQ
TKDHLFFVMEFLNGGDLMYHIQDKGRFELYRATFYAAEIMCGLQFLHSKGIIYRDLKLDNVLLDRDGHIKIADFGMCKENIFGESRASTF
CGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFEREPTKRLGVTGNIK
IHPFFKTINWTLLEKRRLEPPFRPKVKSPRDYSNFDQEFLNEKARLSYSDKNLIDSMDQSAFAGFSFVNPKFEHLLED

--------------------------------------------------------------
>12324_12324_3_CACNA1D-PRKCD_CACNA1D_chr3_53535747_ENST00000350061_PRKCD_chr3_53217468_ENST00000330452_length(transcript)=2656nt_BP=994nt
GGGCGAGCGCCTCCGTCCCCGGATGTGAGCTCCGGCTGCCCGCGGTCCCGAGCCAGCGGCGGCGCGGGCGGCGGCGGCGGGCACCGGGCA
CCGCGGCGGGCGGGCAGACGGGCGGGCATGGGGGGAGCGCCGAGCGGCCCCGGCGGCCGGGCCGGCATCACCGCGGCGTCTCTCCGCTAG
AGGAGGGGACAAGCCAGTTCTCCTTTGCAGCAAAAAATTACATGTATATATTATTAAGATAATATATACATTGGATTTTATTTTTTTAAA
AAGTTTATTTTGCTCCATTTTTGAAAAAGAGAGAGCTTGGGTGGCGAGCGGTTTTTTTTTTAAATCAATTATCCTTATTTTCTGTTATTT
GTCCCCGTCCCTCCCCACCCCCCTGCTGAAGCGAGAATAAGGGCAGGGACCGCGGCTCCTACCTCTTGGTGATCCCCTTCCCCATTCCGC
CCCCGCCTCAACGCCCAGCACAGTGCCCTGCACACAGTAGTCGCTCAATAAATGTTCGTGGATGATGATGATGATGATGATGAAAAAAAT
GCAGCATCAACGGCAGCAGCAAGCGGACCACGCGAACGAGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCAAC
TTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCTGCTAGACAGGCCAAGGCTGCCCAAACTATGAG
CACCTCTGCACCCCCACCTGTAGGATCTCTCTCCCAAAGAAAACGTCAGCAATACGCCAAGAGCAAAAAACAGGGTAACTCGTCCAACAG
CCGACCTGCCCGCGCCCTTTTCTGTTTATCACTCAATAACCCCATCCGAAGAGCCTGCATTAGTATAGTGGAATGGAAACCATTTGACAT
ATTTATATTATTGGCTATTTTTGCCAATTGTGTGGCCTTAGCTATTTACATCCCATTCCCTGAAGATGATTCTAATTCAACAAATCATAA
CTTGTTCCAGAAAGAACGCTTCAACATCGACATGCCGCACCGCTTCAAGGTTCACAACTACATGAGCCCCACCTTCTGTGACCACTGCGG
CAGCCTGCTCTGGGGACTGGTGAAGCAGGGATTAAAGTGTGAAGACTGCGGCATGAATGTGCACCATAAATGCCGGGAGAAGGTGGCCAA
CCTCTGCGGCATCAACCAGAAGCTTTTGGCTGAGGCCTTGAACCAAGTCACCCAGAGAGCCTCCCGGAGATCAGACTCAGCCTCCTCAGA
GCCTGTTGGGATATATCAGGGTTTCGAGAAGAAGACCGGAGTTGCTGGGGAGGACATGCAAGACAACAGTGGGACCTACGGCAAGATCTG
GGAGGGCAGCAGCAAGTGCAACATCAACAACTTCATCTTCCACAAGGTCCTGGGCAAAGGCAGCTTCGGGAAGGTGCTGCTTGGAGAGCT
GAAGGGCAGAGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGATGTGGTCCTGATCGACGACGACGTGGAGTGCACCATGGTTGAGAA
GCGGGTGCTGACACTTGCCGCAGAGAATCCCTTTCTCACCCACCTCATCTGCACCTTCCAGACCAAGGACCACCTGTTCTTTGTGATGGA
GTTCCTCAACGGGGGGGACCTGATGTACCACATCCAGGACAAAGGCCGCTTTGAACTCTACCGTGCCACGTTTTATGCCGCTGAGATAAT
GTGTGGACTGCAGTTTCTACACAGCAAGGGCATCATTTACAGGGACCTCAAACTGGACAATGTGCTGCTGGACCGGGATGGCCACATCAA
GATTGCCGACTTTGGGATGTGCAAAGAGAACATATTCGGGGAGAGCCGGGCCAGCACCTTCTGCGGCACCCCTGACTATATCGCCCCTGA
GATCCTACAGGGCCTGAAGTACACATTCTCTGTGGACTGGTGGTCTTTCGGGGTCCTTCTGTACGAGATGCTCATTGGCCAGTCCCCCTT
CCATGGTGATGATGAGGATGAACTCTTCGAGTCCATCCGTGTGGACACGCCACATTATCCCCGCTGGATCACCAAGGAGTCCAAGGACAT
CCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGACCGGAAACATCAAAATCCACCCCTTCTTCAAGACCATAAACTG
GACTCTGCTGGAAAAGCGGAGGTTGGAGCCACCTTTCAGGCCCAAAGTGAAGTCACCCAGAGACTACAGTAACTTTGACCAGGAGTTCCT
GAACGAGAAGGCGCGCCTCTCCTACAGCGACAAGAACCTCATCGACTCCATGGACCAGTCTGCATTCGCTGGCTTCTCCTTTGTGAACCC
CAAATTCGAGCACCTCCTGGAAGATTGAGGTTCCTGGACAGATCAGGCTAGCCCTGCCCTCCACCCACACCTGCCCGCTCCCCACGATAA
GCACCAGTGGGACTGTGGTGACTTCTGCTGCTGGCCCCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
CTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCTGTGTTTCATTACTTGAATGTAGTTAT
CTATTGAAAATATATATTATATACATAGACATATATATATATATAA

>12324_12324_3_CACNA1D-PRKCD_CACNA1D_chr3_53535747_ENST00000350061_PRKCD_chr3_53217468_ENST00000330452_length(amino acids)=618AA_BP=161
MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQPNSSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAK
SKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLFQKERFNIDMPHRFKVHNY
MSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCGINQKLLAEALNQVTQRASRRSDSASSEPVGIYQGFEKKTGVAGEDMQ
DNSGTYGKIWEGSSKCNINNFIFHKVLGKGSFGKVLLGELKGRGEYFAIKALKKDVVLIDDDVECTMVEKRVLTLAAENPFLTHLICTFQ
TKDHLFFVMEFLNGGDLMYHIQDKGRFELYRATFYAAEIMCGLQFLHSKGIIYRDLKLDNVLLDRDGHIKIADFGMCKENIFGESRASTF
CGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFEREPTKRLGVTGNIK
IHPFFKTINWTLLEKRRLEPPFRPKVKSPRDYSNFDQEFLNEKARLSYSDKNLIDSMDQSAFAGFSFVNPKFEHLLED

--------------------------------------------------------------
>12324_12324_4_CACNA1D-PRKCD_CACNA1D_chr3_53535747_ENST00000350061_PRKCD_chr3_53217468_ENST00000394729_length(transcript)=2819nt_BP=994nt
GGGCGAGCGCCTCCGTCCCCGGATGTGAGCTCCGGCTGCCCGCGGTCCCGAGCCAGCGGCGGCGCGGGCGGCGGCGGCGGGCACCGGGCA
CCGCGGCGGGCGGGCAGACGGGCGGGCATGGGGGGAGCGCCGAGCGGCCCCGGCGGCCGGGCCGGCATCACCGCGGCGTCTCTCCGCTAG
AGGAGGGGACAAGCCAGTTCTCCTTTGCAGCAAAAAATTACATGTATATATTATTAAGATAATATATACATTGGATTTTATTTTTTTAAA
AAGTTTATTTTGCTCCATTTTTGAAAAAGAGAGAGCTTGGGTGGCGAGCGGTTTTTTTTTTAAATCAATTATCCTTATTTTCTGTTATTT
GTCCCCGTCCCTCCCCACCCCCCTGCTGAAGCGAGAATAAGGGCAGGGACCGCGGCTCCTACCTCTTGGTGATCCCCTTCCCCATTCCGC
CCCCGCCTCAACGCCCAGCACAGTGCCCTGCACACAGTAGTCGCTCAATAAATGTTCGTGGATGATGATGATGATGATGATGAAAAAAAT
GCAGCATCAACGGCAGCAGCAAGCGGACCACGCGAACGAGGCAAACTATGCAAGAGGCACCAGACTTCCTCTTTCTGGTGAAGGACCAAC
TTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCTGCTAGACAGGCCAAGGCTGCCCAAACTATGAG
CACCTCTGCACCCCCACCTGTAGGATCTCTCTCCCAAAGAAAACGTCAGCAATACGCCAAGAGCAAAAAACAGGGTAACTCGTCCAACAG
CCGACCTGCCCGCGCCCTTTTCTGTTTATCACTCAATAACCCCATCCGAAGAGCCTGCATTAGTATAGTGGAATGGAAACCATTTGACAT
ATTTATATTATTGGCTATTTTTGCCAATTGTGTGGCCTTAGCTATTTACATCCCATTCCCTGAAGATGATTCTAATTCAACAAATCATAA
CTTGTTCCAGAAAGAACGCTTCAACATCGACATGCCGCACCGCTTCAAGGTTCACAACTACATGAGCCCCACCTTCTGTGACCACTGCGG
CAGCCTGCTCTGGGGACTGGTGAAGCAGGGATTAAAGTGTGAAGACTGCGGCATGAATGTGCACCATAAATGCCGGGAGAAGGTGGCCAA
CCTCTGCGGCATCAACCAGAAGCTTTTGGCTGAGGCCTTGAACCAAGTCACCCAGAGAGCCTCCCGGAGATCAGACTCAGCCTCCTCAGA
GCCTGTTGGGATATATCAGGGTTTCGAGAAGAAGACCGGAGTTGCTGGGGAGGACATGCAAGACAACAGTGGGACCTACGGCAAGATCTG
GGAGGGCAGCAGCAAGTGCAACATCAACAACTTCATCTTCCACAAGGTCCTGGGCAAAGGCAGCTTCGGGAAGGTGCTGCTTGGAGAGCT
GAAGGGCAGAGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGATGTGGTCCTGATCGACGACGACGTGGAGTGCACCATGGTTGAGAA
GCGGGTGCTGACACTTGCCGCAGAGAATCCCTTTCTCACCCACCTCATCTGCACCTTCCAGACCAAGGACCACCTGTTCTTTGTGATGGA
GTTCCTCAACGGGGGGGACCTGATGTACCACATCCAGGACAAAGGCCGCTTTGAACTCTACCGTGCCACGTTTTATGCCGCTGAGATAAT
GTGTGGACTGCAGTTTCTACACAGCAAGGGCATCATTTACAGGGACCTCAAACTGGACAATGTGCTGCTGGACCGGGATGGCCACATCAA
GATTGCCGACTTTGGGATGTGCAAAGAGAACATATTCGGGGAGAGCCGGGCCAGCACCTTCTGCGGCACCCCTGACTATATCGCCCCTGA
GATCCTACAGGGCCTGAAGTACACATTCTCTGTGGACTGGTGGTCTTTCGGGGTCCTTCTGTACGAGATGCTCATTGGCCAGTCCCCCTT
CCATGGTGATGATGAGGATGAACTCTTCGAGTCCATCCGTGTGGACACGCCACATTATCCCCGCTGGATCACCAAGGAGTCCAAGGACAT
CCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGACCGGAAACATCAAAATCCACCCCTTCTTCAAGACCATAAACTG
GACTCTGCTGGAAAAGCGGAGGTTGGAGCCACCTTTCAGGCCCAAAGTGAAGTCACCCAGAGACTACAGTAACTTTGACCAGGAGTTCCT
GAACGAGAAGGCGCGCCTCTCCTACAGCGACAAGAACCTCATCGACTCCATGGACCAGTCTGCATTCGCTGGCTTCTCCTTTGTGAACCC
CAAATTCGAGCACCTCCTGGAAGATTGAGGTTCCTGGACAGATCAGGCTAGCCCTGCCCTCCACCCACACCTGCCCGCTCCCCACGATAA
GCACCAGTGGGACTGTGGTGACTTCTGCTGCTGGCCCCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
CTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCTGTGTTTCATTACTTGAATGTAGTTAT
CTATTGAAAATATATATTATATACATAGACATATATATATATATAATAGGCTGTATATATTGCTCAGTAGAGAAAAACCATGGGGGACTG
GTGATATGTTGATCTTTTTCAAAAAAATATATATATGACAAAAAAAAAAAAAAAGGAGCACAAGCTGTTTGAACCACCAGGTTTATTTGT
GTGTCTAAATAAACACCAAATAGTACCAA

>12324_12324_4_CACNA1D-PRKCD_CACNA1D_chr3_53535747_ENST00000350061_PRKCD_chr3_53217468_ENST00000394729_length(amino acids)=618AA_BP=161
MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQPNSSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAK
SKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLFQKERFNIDMPHRFKVHNY
MSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCGINQKLLAEALNQVTQRASRRSDSASSEPVGIYQGFEKKTGVAGEDMQ
DNSGTYGKIWEGSSKCNINNFIFHKVLGKGSFGKVLLGELKGRGEYFAIKALKKDVVLIDDDVECTMVEKRVLTLAAENPFLTHLICTFQ
TKDHLFFVMEFLNGGDLMYHIQDKGRFELYRATFYAAEIMCGLQFLHSKGIIYRDLKLDNVLLDRDGHIKIADFGMCKENIFGESRASTF
CGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFEREPTKRLGVTGNIK
IHPFFKTINWTLLEKRRLEPPFRPKVKSPRDYSNFDQEFLNEKARLSYSDKNLIDSMDQSAFAGFSFVNPKFEHLLED

--------------------------------------------------------------
>12324_12324_5_CACNA1D-PRKCD_CACNA1D_chr3_53535747_ENST00000422281_PRKCD_chr3_53217468_ENST00000330452_length(transcript)=2145nt_BP=483nt
ATGATGATGATGATGATGATGAAAAAAATGCAGCATCAACGGCAGCAGCAAGCGGACCACGCGAACGAGGCAAACTATGCAAGAGGCACC
AGACTTCCTCTTTCTGGTGAAGGACCAACTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCTGCT
AGACAGGCCAAGGCTGCCCAAACTATGAGCACCTCTGCACCCCCACCTGTAGGATCTCTCTCCCAAAGAAAACGTCAGCAATACGCCAAG
AGCAAAAAACAGGGTAACTCGTCCAACAGCCGACCTGCCCGCGCCCTTTTCTGTTTATCACTCAATAACCCCATCCGAAGAGCCTGCATT
AGTATAGTGGAATGGAAACCATTTGACATATTTATATTATTGGCTATTTTTGCCAATTGTGTGGCCTTAGCTATTTACATCCCATTCCCT
GAAGATGATTCTAATTCAACAAATCATAACTTGTTCCAGAAAGAACGCTTCAACATCGACATGCCGCACCGCTTCAAGGTTCACAACTAC
ATGAGCCCCACCTTCTGTGACCACTGCGGCAGCCTGCTCTGGGGACTGGTGAAGCAGGGATTAAAGTGTGAAGACTGCGGCATGAATGTG
CACCATAAATGCCGGGAGAAGGTGGCCAACCTCTGCGGCATCAACCAGAAGCTTTTGGCTGAGGCCTTGAACCAAGTCACCCAGAGAGCC
TCCCGGAGATCAGACTCAGCCTCCTCAGAGCCTGTTGGGATATATCAGGGTTTCGAGAAGAAGACCGGAGTTGCTGGGGAGGACATGCAA
GACAACAGTGGGACCTACGGCAAGATCTGGGAGGGCAGCAGCAAGTGCAACATCAACAACTTCATCTTCCACAAGGTCCTGGGCAAAGGC
AGCTTCGGGAAGGTGCTGCTTGGAGAGCTGAAGGGCAGAGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGATGTGGTCCTGATCGAC
GACGACGTGGAGTGCACCATGGTTGAGAAGCGGGTGCTGACACTTGCCGCAGAGAATCCCTTTCTCACCCACCTCATCTGCACCTTCCAG
ACCAAGGACCACCTGTTCTTTGTGATGGAGTTCCTCAACGGGGGGGACCTGATGTACCACATCCAGGACAAAGGCCGCTTTGAACTCTAC
CGTGCCACGTTTTATGCCGCTGAGATAATGTGTGGACTGCAGTTTCTACACAGCAAGGGCATCATTTACAGGGACCTCAAACTGGACAAT
GTGCTGCTGGACCGGGATGGCCACATCAAGATTGCCGACTTTGGGATGTGCAAAGAGAACATATTCGGGGAGAGCCGGGCCAGCACCTTC
TGCGGCACCCCTGACTATATCGCCCCTGAGATCCTACAGGGCCTGAAGTACACATTCTCTGTGGACTGGTGGTCTTTCGGGGTCCTTCTG
TACGAGATGCTCATTGGCCAGTCCCCCTTCCATGGTGATGATGAGGATGAACTCTTCGAGTCCATCCGTGTGGACACGCCACATTATCCC
CGCTGGATCACCAAGGAGTCCAAGGACATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGACCGGAAACATCAAA
ATCCACCCCTTCTTCAAGACCATAAACTGGACTCTGCTGGAAAAGCGGAGGTTGGAGCCACCTTTCAGGCCCAAAGTGAAGTCACCCAGA
GACTACAGTAACTTTGACCAGGAGTTCCTGAACGAGAAGGCGCGCCTCTCCTACAGCGACAAGAACCTCATCGACTCCATGGACCAGTCT
GCATTCGCTGGCTTCTCCTTTGTGAACCCCAAATTCGAGCACCTCCTGGAAGATTGAGGTTCCTGGACAGATCAGGCTAGCCCTGCCCTC
CACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCTGGCCCCGCCCCTGCCCCCAGAGCGTCCTT
GGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAAT
CCTGTGTTTCATTACTTGAATGTAGTTATCTATTGAAAATATATATTATATACATAGACATATATATATATATAA

>12324_12324_5_CACNA1D-PRKCD_CACNA1D_chr3_53535747_ENST00000422281_PRKCD_chr3_53217468_ENST00000330452_length(amino acids)=618AA_BP=161
MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQPNSSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAK
SKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLFQKERFNIDMPHRFKVHNY
MSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCGINQKLLAEALNQVTQRASRRSDSASSEPVGIYQGFEKKTGVAGEDMQ
DNSGTYGKIWEGSSKCNINNFIFHKVLGKGSFGKVLLGELKGRGEYFAIKALKKDVVLIDDDVECTMVEKRVLTLAAENPFLTHLICTFQ
TKDHLFFVMEFLNGGDLMYHIQDKGRFELYRATFYAAEIMCGLQFLHSKGIIYRDLKLDNVLLDRDGHIKIADFGMCKENIFGESRASTF
CGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFEREPTKRLGVTGNIK
IHPFFKTINWTLLEKRRLEPPFRPKVKSPRDYSNFDQEFLNEKARLSYSDKNLIDSMDQSAFAGFSFVNPKFEHLLED

--------------------------------------------------------------
>12324_12324_6_CACNA1D-PRKCD_CACNA1D_chr3_53535747_ENST00000422281_PRKCD_chr3_53217468_ENST00000394729_length(transcript)=2308nt_BP=483nt
ATGATGATGATGATGATGATGAAAAAAATGCAGCATCAACGGCAGCAGCAAGCGGACCACGCGAACGAGGCAAACTATGCAAGAGGCACC
AGACTTCCTCTTTCTGGTGAAGGACCAACTTCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCTGCT
AGACAGGCCAAGGCTGCCCAAACTATGAGCACCTCTGCACCCCCACCTGTAGGATCTCTCTCCCAAAGAAAACGTCAGCAATACGCCAAG
AGCAAAAAACAGGGTAACTCGTCCAACAGCCGACCTGCCCGCGCCCTTTTCTGTTTATCACTCAATAACCCCATCCGAAGAGCCTGCATT
AGTATAGTGGAATGGAAACCATTTGACATATTTATATTATTGGCTATTTTTGCCAATTGTGTGGCCTTAGCTATTTACATCCCATTCCCT
GAAGATGATTCTAATTCAACAAATCATAACTTGTTCCAGAAAGAACGCTTCAACATCGACATGCCGCACCGCTTCAAGGTTCACAACTAC
ATGAGCCCCACCTTCTGTGACCACTGCGGCAGCCTGCTCTGGGGACTGGTGAAGCAGGGATTAAAGTGTGAAGACTGCGGCATGAATGTG
CACCATAAATGCCGGGAGAAGGTGGCCAACCTCTGCGGCATCAACCAGAAGCTTTTGGCTGAGGCCTTGAACCAAGTCACCCAGAGAGCC
TCCCGGAGATCAGACTCAGCCTCCTCAGAGCCTGTTGGGATATATCAGGGTTTCGAGAAGAAGACCGGAGTTGCTGGGGAGGACATGCAA
GACAACAGTGGGACCTACGGCAAGATCTGGGAGGGCAGCAGCAAGTGCAACATCAACAACTTCATCTTCCACAAGGTCCTGGGCAAAGGC
AGCTTCGGGAAGGTGCTGCTTGGAGAGCTGAAGGGCAGAGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGATGTGGTCCTGATCGAC
GACGACGTGGAGTGCACCATGGTTGAGAAGCGGGTGCTGACACTTGCCGCAGAGAATCCCTTTCTCACCCACCTCATCTGCACCTTCCAG
ACCAAGGACCACCTGTTCTTTGTGATGGAGTTCCTCAACGGGGGGGACCTGATGTACCACATCCAGGACAAAGGCCGCTTTGAACTCTAC
CGTGCCACGTTTTATGCCGCTGAGATAATGTGTGGACTGCAGTTTCTACACAGCAAGGGCATCATTTACAGGGACCTCAAACTGGACAAT
GTGCTGCTGGACCGGGATGGCCACATCAAGATTGCCGACTTTGGGATGTGCAAAGAGAACATATTCGGGGAGAGCCGGGCCAGCACCTTC
TGCGGCACCCCTGACTATATCGCCCCTGAGATCCTACAGGGCCTGAAGTACACATTCTCTGTGGACTGGTGGTCTTTCGGGGTCCTTCTG
TACGAGATGCTCATTGGCCAGTCCCCCTTCCATGGTGATGATGAGGATGAACTCTTCGAGTCCATCCGTGTGGACACGCCACATTATCCC
CGCTGGATCACCAAGGAGTCCAAGGACATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGACCGGAAACATCAAA
ATCCACCCCTTCTTCAAGACCATAAACTGGACTCTGCTGGAAAAGCGGAGGTTGGAGCCACCTTTCAGGCCCAAAGTGAAGTCACCCAGA
GACTACAGTAACTTTGACCAGGAGTTCCTGAACGAGAAGGCGCGCCTCTCCTACAGCGACAAGAACCTCATCGACTCCATGGACCAGTCT
GCATTCGCTGGCTTCTCCTTTGTGAACCCCAAATTCGAGCACCTCCTGGAAGATTGAGGTTCCTGGACAGATCAGGCTAGCCCTGCCCTC
CACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCTGGCCCCGCCCCTGCCCCCAGAGCGTCCTT
GGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAAT
CCTGTGTTTCATTACTTGAATGTAGTTATCTATTGAAAATATATATTATATACATAGACATATATATATATATAATAGGCTGTATATATT
GCTCAGTAGAGAAAAACCATGGGGGACTGGTGATATGTTGATCTTTTTCAAAAAAATATATATATGACAAAAAAAAAAAAAAAGGAGCAC
AAGCTGTTTGAACCACCAGGTTTATTTGTGTGTCTAAATAAACACCAAATAGTACCAA

>12324_12324_6_CACNA1D-PRKCD_CACNA1D_chr3_53535747_ENST00000422281_PRKCD_chr3_53217468_ENST00000394729_length(amino acids)=618AA_BP=161
MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQPNSSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAK
SKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLFQKERFNIDMPHRFKVHNY
MSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCGINQKLLAEALNQVTQRASRRSDSASSEPVGIYQGFEKKTGVAGEDMQ
DNSGTYGKIWEGSSKCNINNFIFHKVLGKGSFGKVLLGELKGRGEYFAIKALKKDVVLIDDDVECTMVEKRVLTLAAENPFLTHLICTFQ
TKDHLFFVMEFLNGGDLMYHIQDKGRFELYRATFYAAEIMCGLQFLHSKGIIYRDLKLDNVLLDRDGHIKIADFGMCKENIFGESRASTF
CGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFEREPTKRLGVTGNIK
IHPFFKTINWTLLEKRRLEPPFRPKVKSPRDYSNFDQEFLNEKARLSYSDKNLIDSMDQSAFAGFSFVNPKFEHLLED

--------------------------------------------------------------

Top

Fusion Gene PPI Analysis for CACNA1D-PRKCD


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page.


check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


Top

Related Drugs for CACNA1D-PRKCD


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.8 2021-05-08)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

Related Diseases for CACNA1D-PRKCD


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneCACNA1DC3554018SINOATRIAL NODE DYSFUNCTION AND DEAFNESS5CLINGEN;GENOMICS_ENGLAND;ORPHANET
HgeneCACNA1DC0001430Adenoma2CTD_human
HgeneCACNA1DC0205646Adenoma, Basal Cell2CTD_human
HgeneCACNA1DC0205647Follicular adenoma2CTD_human
HgeneCACNA1DC0205648Adenoma, Microcystic2CTD_human
HgeneCACNA1DC0205649Adenoma, Monomorphic2CTD_human
HgeneCACNA1DC0205650Papillary adenoma2CTD_human
HgeneCACNA1DC0205651Adenoma, Trabecular2CTD_human
HgeneCACNA1DC3809609PRIMARY ALDOSTERONISM, SEIZURES, AND NEUROLOGIC ABNORMALITIES2GENOMICS_ENGLAND;ORPHANET;UNIPROT
HgeneCACNA1DC0004331Auriculo-Ventricular Dissociation1CTD_human
HgeneCACNA1DC0005586Bipolar Disorder1CTD_human
HgeneCACNA1DC0005587Depression, Bipolar1CTD_human
HgeneCACNA1DC0011052Prelingual Deafness1CTD_human
HgeneCACNA1DC0011053Deafness1CTD_human
HgeneCACNA1DC0018794Heart Block1CTD_human
HgeneCACNA1DC0020428Hyperaldosteronism1CTD_human
HgeneCACNA1DC0024713Manic Disorder1CTD_human
HgeneCACNA1DC0037052Sick Sinus Syndrome1CTD_human
HgeneCACNA1DC0039240Supraventricular tachycardia1CTD_human
HgeneCACNA1DC0086395Hearing Loss, Extreme1CTD_human
HgeneCACNA1DC0338831Manic1CTD_human
HgeneCACNA1DC0428908Sinus Node Dysfunction (disorder)1CTD_human
HgeneCACNA1DC0428977Bradycardia1CTD_human
HgeneCACNA1DC0525045Mood Disorders1PSYGENET
HgeneCACNA1DC0581883Complete Hearing Loss1CTD_human
HgeneCACNA1DC0751068Deafness, Acquired1CTD_human
HgeneCACNA1DC1384514Conn Syndrome1CTD_human
HgeneCACNA1DC3665473Bilateral Deafness1CTD_human
HgeneCACNA1DC4082305Deaf Mutism1CTD_human
TgeneC0002152Alloxan Diabetes1CTD_human
TgeneC0009447Common Variable Immunodeficiency1ORPHANET
TgeneC0011853Diabetes Mellitus, Experimental1CTD_human
TgeneC0019193Hepatitis, Toxic1CTD_human
TgeneC0020538Hypertensive disease1CTD_human
TgeneC0020672Hypothermia, natural1CTD_human
TgeneC0021841Intestinal Neoplasms1CTD_human
TgeneC0022333Jacksonian Seizure1CTD_human
TgeneC0023893Liver Cirrhosis, Experimental1CTD_human
TgeneC0036572Seizures1CTD_human
TgeneC0038433Streptozotocin Diabetes1CTD_human
TgeneC0149504Encephalopathy, Toxic1CTD_human
TgeneC0149958Complex partial seizures1CTD_human
TgeneC0154659Toxic Encephalitis1CTD_human
TgeneC0234533Generalized seizures1CTD_human
TgeneC0234535Clonic Seizures1CTD_human
TgeneC0235032Neurotoxicity Syndromes1CTD_human
TgeneC0242422Parkinsonian Disorders1CTD_human
TgeneC0242423Ramsay Hunt Paralysis Syndrome1CTD_human
TgeneC0270824Visual seizure1CTD_human
TgeneC0270844Tonic Seizures1CTD_human
TgeneC0270846Epileptic drop attack1CTD_human
TgeneC0346627Intestinal Cancer1CTD_human
TgeneC0400966Non-alcoholic Fatty Liver Disease1CTD_human
TgeneC0422850Seizures, Somatosensory1CTD_human
TgeneC0422852Seizures, Auditory1CTD_human
TgeneC0422853Olfactory seizure1CTD_human
TgeneC0422854Gustatory seizure1CTD_human
TgeneC0422855Vertiginous seizure1CTD_human
TgeneC0494475Tonic - clonic seizures1CTD_human
TgeneC0751056Non-epileptic convulsion1CTD_human
TgeneC0751110Single Seizure1CTD_human
TgeneC0751123Atonic Absence Seizures1CTD_human
TgeneC0751494Convulsive Seizures1CTD_human
TgeneC0751495Seizures, Focal1CTD_human
TgeneC0751496Seizures, Sensory1CTD_human
TgeneC0752097Autosomal Dominant Juvenile Parkinson Disease1CTD_human
TgeneC0752098Autosomal Dominant Parkinsonism1CTD_human
TgeneC0752100Autosomal Recessive Parkinsonism1CTD_human
TgeneC0752101Parkinsonism, Experimental1CTD_human
TgeneC0752104Familial Juvenile Parkinsonism1CTD_human
TgeneC0752105Parkinsonism, Juvenile1CTD_human
TgeneC0860207Drug-Induced Liver Disease1CTD_human
TgeneC1262760Hepatitis, Drug-Induced1CTD_human
TgeneC1328840Autoimmune Lymphoproliferative Syndrome1ORPHANET
TgeneC1868675PARKINSON DISEASE 2, AUTOSOMAL RECESSIVE JUVENILE1CTD_human
TgeneC3241937Nonalcoholic Steatohepatitis1CTD_human
TgeneC3280742SYSTEMIC LUPUS ERYTHEMATOSUS 161ORPHANET
TgeneC3495874Nonepileptic Seizures1CTD_human
TgeneC3658290Drug-Induced Acute Liver Injury1CTD_human
TgeneC3809928AUTOIMMUNE LYMPHOPROLIFERATIVE SYNDROME, TYPE III1CTD_human;GENOMICS_ENGLAND
TgeneC4048158Convulsions1CTD_human
TgeneC4277682Chemical and Drug Induced Liver Injury1CTD_human
TgeneC4279912Chemically-Induced Liver Toxicity1CTD_human
TgeneC4316903Absence Seizures1CTD_human
TgeneC4317109Epileptic Seizures1CTD_human
TgeneC4317123Myoclonic Seizures1CTD_human
TgeneC4505436Generalized Absence Seizures1CTD_human