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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:CAPN2-SH2D1B (FusionGDB2 ID:HG824TG117157) |
Fusion Gene Summary for CAPN2-SH2D1B |
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Fusion gene information | Fusion gene name: CAPN2-SH2D1B | Fusion gene ID: hg824tg117157 | Hgene | Tgene | Gene symbol | CAPN2 | SH2D1B | Gene ID | 824 | 117157 |
Gene name | calpain 2 | SH2 domain containing 1B | |
Synonyms | CANP2|CANPL2|CANPml|mCANP | EAT2 | |
Cytomap | ('CAPN2')('SH2D1B') 1q41 | 1q23.3 | |
Type of gene | protein-coding | protein-coding | |
Description | calpain-2 catalytic subunitCANP 2M-calpaincalcium-activated neutral proteinase 2calpain 2, (m/II) large subunitcalpain 2, large [catalytic] subunitcalpain 2, large subunitcalpain M-typecalpain, large polypeptide L2millimolar-calpain | SH2 domain-containing protein 1BEAT-2EWS/FLI1-activated transcript 2SH2 domain-containing molecule EAT2 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000474026, ENST00000295006, ENST00000433674, | ||
Fusion gene scores | * DoF score | 11 X 9 X 5=495 | 4 X 4 X 3=48 |
# samples | 11 | 4 | |
** MAII score | log2(11/495*10)=-2.16992500144231 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/48*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: CAPN2 [Title/Abstract] AND SH2D1B [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | CAPN2(223954118)-SH2D1B(162368877), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. | CAPN2-SH2D1B seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. CAPN2-SH2D1B seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. CAPN2-SH2D1B seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. CAPN2-SH2D1B seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | CAPN2 | GO:0051603 | proteolysis involved in cellular protein catabolic process | 12150984 |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | SKCM | TCGA-EE-A182-06A | CAPN2 | chr1 | 223954118 | + | SH2D1B | chr1 | 162368877 | - |
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Fusion Gene ORF analysis for CAPN2-SH2D1B |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
3UTR-3CDS | ENST00000474026 | ENST00000367929 | CAPN2 | chr1 | 223954118 | + | SH2D1B | chr1 | 162368877 | - |
3UTR-intron | ENST00000474026 | ENST00000359567 | CAPN2 | chr1 | 223954118 | + | SH2D1B | chr1 | 162368877 | - |
3UTR-intron | ENST00000474026 | ENST00000493550 | CAPN2 | chr1 | 223954118 | + | SH2D1B | chr1 | 162368877 | - |
5CDS-intron | ENST00000295006 | ENST00000359567 | CAPN2 | chr1 | 223954118 | + | SH2D1B | chr1 | 162368877 | - |
5CDS-intron | ENST00000295006 | ENST00000493550 | CAPN2 | chr1 | 223954118 | + | SH2D1B | chr1 | 162368877 | - |
5CDS-intron | ENST00000433674 | ENST00000359567 | CAPN2 | chr1 | 223954118 | + | SH2D1B | chr1 | 162368877 | - |
5CDS-intron | ENST00000433674 | ENST00000493550 | CAPN2 | chr1 | 223954118 | + | SH2D1B | chr1 | 162368877 | - |
In-frame | ENST00000295006 | ENST00000367929 | CAPN2 | chr1 | 223954118 | + | SH2D1B | chr1 | 162368877 | - |
In-frame | ENST00000433674 | ENST00000367929 | CAPN2 | chr1 | 223954118 | + | SH2D1B | chr1 | 162368877 | - |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000433674 | CAPN2 | chr1 | 223954118 | + | ENST00000367929 | SH2D1B | chr1 | 162368877 | - | 3922 | 1707 | 227 | 1696 | 489 |
ENST00000295006 | CAPN2 | chr1 | 223954118 | + | ENST00000367929 | SH2D1B | chr1 | 162368877 | - | 4229 | 2014 | 309 | 2003 | 564 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000433674 | ENST00000367929 | CAPN2 | chr1 | 223954118 | + | SH2D1B | chr1 | 162368877 | - | 0.000798473 | 0.9992016 |
ENST00000295006 | ENST00000367929 | CAPN2 | chr1 | 223954118 | + | SH2D1B | chr1 | 162368877 | - | 0.000667486 | 0.9993325 |
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Fusion Genomic Features for CAPN2-SH2D1B |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
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Fusion Protein Features for CAPN2-SH2D1B |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr1:223954118/chr1:162368877) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | SH2D1B | chr1:223954118 | chr1:162368877 | ENST00000359567 | 0 | 3 | 5_101 | 0 | 78.0 | Domain | SH2 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CAPN2 | chr1:223954118 | chr1:162368877 | ENST00000295006 | + | 1 | 21 | 585_596 | 0 | 701.0 | Calcium binding | Note=1 |
Hgene | CAPN2 | chr1:223954118 | chr1:162368877 | ENST00000295006 | + | 1 | 21 | 615_626 | 0 | 701.0 | Calcium binding | Note=2 |
Hgene | CAPN2 | chr1:223954118 | chr1:162368877 | ENST00000433674 | + | 1 | 21 | 585_596 | 0 | 623.0 | Calcium binding | Note=1 |
Hgene | CAPN2 | chr1:223954118 | chr1:162368877 | ENST00000433674 | + | 1 | 21 | 615_626 | 0 | 623.0 | Calcium binding | Note=2 |
Hgene | CAPN2 | chr1:223954118 | chr1:162368877 | ENST00000295006 | + | 1 | 21 | 45_344 | 0 | 701.0 | Domain | Calpain catalytic |
Hgene | CAPN2 | chr1:223954118 | chr1:162368877 | ENST00000295006 | + | 1 | 21 | 572_605 | 0 | 701.0 | Domain | EF-hand 1 |
Hgene | CAPN2 | chr1:223954118 | chr1:162368877 | ENST00000295006 | + | 1 | 21 | 602_637 | 0 | 701.0 | Domain | EF-hand 2 |
Hgene | CAPN2 | chr1:223954118 | chr1:162368877 | ENST00000295006 | + | 1 | 21 | 667_700 | 0 | 701.0 | Domain | EF-hand 3 |
Hgene | CAPN2 | chr1:223954118 | chr1:162368877 | ENST00000433674 | + | 1 | 21 | 45_344 | 0 | 623.0 | Domain | Calpain catalytic |
Hgene | CAPN2 | chr1:223954118 | chr1:162368877 | ENST00000433674 | + | 1 | 21 | 572_605 | 0 | 623.0 | Domain | EF-hand 1 |
Hgene | CAPN2 | chr1:223954118 | chr1:162368877 | ENST00000433674 | + | 1 | 21 | 602_637 | 0 | 623.0 | Domain | EF-hand 2 |
Hgene | CAPN2 | chr1:223954118 | chr1:162368877 | ENST00000433674 | + | 1 | 21 | 667_700 | 0 | 623.0 | Domain | EF-hand 3 |
Hgene | CAPN2 | chr1:223954118 | chr1:162368877 | ENST00000295006 | + | 1 | 21 | 345_514 | 0 | 701.0 | Region | Note=Domain III |
Hgene | CAPN2 | chr1:223954118 | chr1:162368877 | ENST00000295006 | + | 1 | 21 | 515_529 | 0 | 701.0 | Region | Note=Linker |
Hgene | CAPN2 | chr1:223954118 | chr1:162368877 | ENST00000295006 | + | 1 | 21 | 530_700 | 0 | 701.0 | Region | Note=Domain IV |
Hgene | CAPN2 | chr1:223954118 | chr1:162368877 | ENST00000433674 | + | 1 | 21 | 345_514 | 0 | 623.0 | Region | Note=Domain III |
Hgene | CAPN2 | chr1:223954118 | chr1:162368877 | ENST00000433674 | + | 1 | 21 | 515_529 | 0 | 623.0 | Region | Note=Linker |
Hgene | CAPN2 | chr1:223954118 | chr1:162368877 | ENST00000433674 | + | 1 | 21 | 530_700 | 0 | 623.0 | Region | Note=Domain IV |
Tgene | SH2D1B | chr1:223954118 | chr1:162368877 | ENST00000367929 | 1 | 4 | 5_101 | 66 | 133.0 | Domain | SH2 |
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Fusion Gene Sequence for CAPN2-SH2D1B |
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>12877_12877_1_CAPN2-SH2D1B_CAPN2_chr1_223954118_ENST00000295006_SH2D1B_chr1_162368877_ENST00000367929_length(transcript)=4229nt_BP=2014nt CCTCCCCGGCGCCGGGCCGCGCCATCCCGGGAGCTGTCCGCAGATGGCAGCACCGGCCCCGGGTCGCGGCGTTCCCGGCGCTCGGCAGGC CGCAGGATGGCCTGGTCCCGGGCCGGGAGCCCAGCAGGCCGGGAGCGGCTGAGGCCACACCCCGCGGGCCGGGCCGCTTCCCTCCGGTGA ATCATCGCTCGCAGCGGCGGCGCCCGCAGTGGCCGCAGCAGCGCGCCGGGCCCTGGCCGCGCCCCAGCCGAGCGCAGCGCGGAGTCGCCC CGACCTTTCTCTGCGCAGTACGGCCGCCGGGACCGCAGCATGGCGGGCATCGCGGCCAAGCTGGCGAAGGACCGGGAGGCGGCCGAGGGG CTGGGCTCCCACGACAGGGCCATCAAGTACCTCAACCAGGACTACGAGGCGCTGCGGAACGAGTGCCTGGAGGCCGGGACGCTCTTCCAG GACCCGTCCTTCCCGGCCATCCCCTCGGCCCTGGGCTTCAAGGAGTTGGGGCCCTACTCCAGCAAAACCCGGGGCATCGAGTGGAAGCGC CCCACGGAGATCTGCGCTGACCCCCAGTTTATCATTGGAGGAGCCACCCGCACAGACATCTGCCAAGGAGCCCTGGGTGACTGCTGGCTG CTGGCAGCCATTGCCTCCCTCACCTTGAATGAAGAAATCCTGGCTCGAGTCGTCCCCCTAAACCAGAGCTTCCAGGAAAACTATGCAGGG ATCTTTCACTTCCAGTTCTGGCAATACGGCGAGTGGGTGGAGGTGGTGGTGGATGACAGGCTGCCCACCAAGGACGGGGAGCTGCTCTTT GTGCATTCAGCCGAAGGGAGCGAGTTCTGGAGCGCCCTGCTGGAGAAGGCATACGCCAAGATCAACGGATGCTATGAAGCGCTATCAGGG GGTGCCACCACTGAGGGCTTCGAAGACTTCACCGGAGGCATTGCTGAGTGGTATGAGTTGAAGAAGCCCCCTCCCAACCTGTTCAAGATC ATCCAGAAAGCTCTGCAAAAAGGCTCTCTCCTTGGCTGCTCCATCGACATCACCAGCGCCGCGGACTCGGAGGCCATCACGTTTCAGAAG CTGGTGAAGGGGCACGCGTACTCGGTCACCGGAGCCGAGGAGGTTGAAAGTAACGGAAGCCTACAGAAACTGATCCGCATCCGAAATCCC TGGGGAGAAGTGGAGTGGACAGGGCGGTGGAATGACAACTGCCCAAGCTGGAACACTATAGACCCAGAGGAGAGGGAAAGGCTGACCAGA CGGCATGAAGATGGAGAATTCTGGATGTCTTTCAGTGACTTCCTGAGGCACTATTCCCGCCTGGAGATCTGTAACCTGACCCCAGACACT CTCACCAGCGATACCTACAAGAAGTGGAAACTCACCAAAATGGATGGGAACTGGAGGCGGGGCTCCACCGCGGGAGGTTGCAGGAACTAC CCGAACACATTCTGGATGAACCCTCAGTACCTGATCAAGCTGGAGGAGGAGGATGAGGACGAGGAGGATGGGGAGAGCGGCTGCACCTTC CTGGTGGGGCTCATTCAGAAGCACCGACGGCGGCAGAGGAAGATGGGCGAGGACATGCACACCATCGGCTTTGGCATCTATGAGGTTCCA GAGGAGTTAAGTGGGCAGACCAACATCCACCTCAGCAAAAACTTCTTCCTGACGAATCGCGCCAGGGAGCGCTCAGACACCTTCATCAAC CTCCGGGAGGTGCTCAACCGCTTCAAGCTGCCGCCAGGAGAGTACATTCTCGTGCCTTCCACCTTCGAACCCAACAAGGATGGGGATTTC TGCATCCGGGTCTTTTCTGAAAAGAAAGCTGACTACCAAGCTGTCGATGATGAAATCGAGGCCAATCTTGAAGAGTTCGACATCAGCGAG GATGACATTGATGATGGATTCAGGAGACTGTTTGCCCAGTTGGCAGGAGAGGATGCGGAGATCTCTGCCTTTGAGCTGCAGACCATCCTG AGAAGGGTTCTAGCAAAGCGTTGACATGCTAGATACTGCAGAAGGTTCTCCAAAACAGGTCTTTCCAAGCCTAAAGGAACTGATCTCCAA ATTTGAAAAACCAAATCAGGGGATGGTGGTTCACCTTTTAAAGCCAATAAAGAGAACCAGCCCCAGCTTGAGATGGAGAGGATTGAAATT AGAGTTGGAAACATTTGTGAACAGTAACAGCGATTATGTGGATGTCTTGCCTTGAAGATAAGGCTGCCGGACAAAGCAAGTTGAAGAGAT GAGTAACAGTTCTCACTGATGACCCACTTCTGCAGGCATAGGTCCAGAGCACCAAACTCTAGTGGACAATTCAGACTCTCCTGGTTGTGT AACTGAAGATGTTCTGCCCACCAGCACCAGAGGTCACTCTCCACATCCCCGCCTCCCAGACATATACCAGGAGCAATTTCAAAACCCTCT CCAGTTTCACTCTTCTTTCTTGGAATGGGACAGCCTGAACATTTTCCCTTTGACTTGTTAAAGGTACCACCCTACATCATGGTTGACACC CTCCTTTGGACCATGCAGTCAGAGGGGCAGCTTTATACAGAGGAGGGGCACACTTGTCTGTGAGTTTGAAGCCCTGAGTTCCAGTCCTGT GGCTGTGTGACTTTGAACACGTTTCTGCCCATCTCCAGGTCTTAGTTTCTTTGTCTCTGTGGTTGGGTGGGATGATAAACATTGCCCCAG TCTCTCTGTTGAGCCTGCTTGTGTCAGGTGAAGGTGAGGGATCGGGAGTGATGGAGATGCATACAGATCAGCACCTTCTCTGTACCTGCT GGACCCCCATGTGCACCCTTCTCCCTCCAGCCTGGGCTACTCTCCTCCTGGTTCTTTCTAATCTTAAACTTCCTGGTGAGCATTGCCCCA GCCACACTTTCTCCCTGGTTTTGCTTAATTCCACTTATGCATCAGTCATTTCAACAGCATGAATGTGGTTCTGTACAGTGATGTATGTGG AGATTTCTAAAATATTCTATGTGTGATTTCTGTTCCCAACTAGGTTCTAAGTGCCATCAAAGCACGGTTGGGTCTCCCTTGTATCTTCCA CAGTGTGTAGAAATTTGTGCTGCCCAGAGCTGTGCCTAGTTCATAGAAACTGACTGGAAGCACATTGCTGAGGGAGGTTTGTTGAATTGG TTTTTAAGGTTTACTGAAATTGATTTGCTGAATTTTTCTGCTAGTTCAAAATGTGAATTAGGACCTGGTCAGTTTGAAATATACCAAATT CTATGCCCTTTCTCTTACCTATCATCAAATTGTAGTAATGTATTTCACCCCACTGGACTTATCTTCAGAGTTTTAAAAGAGAGGAGCTCT CGACTTAGAGGTAATATGAACAGATGAACAGACACTGTGGCTGGAGCCCCAAAGTGTGGAGCATTGTGAGATTTGGGGTCACAGCAATTT ATGGCTACTATTCCCTGGGTCTGGTAGGTAGGACAAATGTCCTCTTTTACTTTTCAAAACTGGCTTAGGTATTCATGGACCTTGATTCTT CTATATACATTTTATAATAAATACGTGAAATTGCTTAAAACCTCTTTTTGGAATTTTTAATGAACTTGCAACAAATTTGTAAATAGGAGA GAACTGACGTTCTTGTGATGTTTTCCCATGCATAAACATGCCACATCCATGTTCTTGGGTCATCTTTTTTGCCCTTTCATGGAGTCATAA ATTTTCCCAACTGAAGTCTTGTATATTCTGTTAGATTAATTCCTATTTCTAGTTGCTGTAAATGATATCTTATGTTTTATTACATTTCTA ATAGGATATGGTGTTGGTGAAATGTTAACCCTCTCATTAGATCTACTAGTTTACCTGTTGATTCTATTGTGTTTTCTATGTAAATGATTT TGTCAGCTATAAATAATAACATTTTATTTTCTCTTTCCTTGCAATACCTATGCTCATTTATTTTTTATGTTTACCCATTGGTTAGGGCCT CCTGTATACATTAAACAGTTCATAGTCATGATAGTGAGTATTCTTACACTGTTCCCAGTATTACAGGGAATGCTTAGAAATTTTCTTTAT TTAAACATTATGTTTGTTGTAGCCTTGTTAAAGGCTATTTTATAATTTTTACTAGAAATATTTTGACATTTATTGTGATTTTTTTCTATC TCTAATCTATTGAGATAGTCACATTCCTTTTGTCTTCACTCCATTATAAAGGTAAGTTACCTTAATAAAATTGTTGATATCATTTCATC >12877_12877_1_CAPN2-SH2D1B_CAPN2_chr1_223954118_ENST00000295006_SH2D1B_chr1_162368877_ENST00000367929_length(amino acids)=564AA_BP= MAGIAAKLAKDREAAEGLGSHDRAIKYLNQDYEALRNECLEAGTLFQDPSFPAIPSALGFKELGPYSSKTRGIEWKRPTEICADPQFIIG GATRTDICQGALGDCWLLAAIASLTLNEEILARVVPLNQSFQENYAGIFHFQFWQYGEWVEVVVDDRLPTKDGELLFVHSAEGSEFWSAL LEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWYELKKPPPNLFKIIQKALQKGSLLGCSIDITSAADSEAITFQKLVKGHAYSVTGAE EVESNGSLQKLIRIRNPWGEVEWTGRWNDNCPSWNTIDPEERERLTRRHEDGEFWMSFSDFLRHYSRLEICNLTPDTLTSDTYKKWKLTK MDGNWRRGSTAGGCRNYPNTFWMNPQYLIKLEEEDEDEEDGESGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELSGQTNIHLSK NFFLTNRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVFSEKKADYQAVDDEIEANLEEFDISEDDIDDGFRRLFAQ LAGEDAEISAFELQTILRRVLAKR -------------------------------------------------------------- >12877_12877_2_CAPN2-SH2D1B_CAPN2_chr1_223954118_ENST00000433674_SH2D1B_chr1_162368877_ENST00000367929_length(transcript)=3922nt_BP=1707nt ACTCAGACTCTGATGGCTCTGTAGCTAACTGGCCCATCCTCAGAGACTAACGCAAAGGAACGAATTTCCAGGATGTTCGACTATGTGGAG AAAACAAAAAAAAAGCAAAGAAAAAAATATTTTTAAAGAAAGAAAGAAGGCCAGGTGCAGTGGTTCACGCCTGTAATCCCAACACTTTGG GAGGCCGAGGCAGACAGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGAGATCTGCGCTGACCCCCAGTTTATCATTG GAGGAGCCACCCGCACAGACATCTGCCAAGGAGCCCTGGGTGACTGCTGGCTGCTGGCAGCCATTGCCTCCCTCACCTTGAATGAAGAAA TCCTGGCTCGAGTCGTCCCCCTAAACCAGAGCTTCCAGGAAAACTATGCAGGGATCTTTCACTTCCAGTTCTGGCAATACGGCGAGTGGG TGGAGGTGGTGGTGGATGACAGGCTGCCCACCAAGGACGGGGAGCTGCTCTTTGTGCATTCAGCCGAAGGGAGCGAGTTCTGGAGCGCCC TGCTGGAGAAGGCATACGCCAAGATCAACGGATGCTATGAAGCGCTATCAGGGGGTGCCACCACTGAGGGCTTCGAAGACTTCACCGGAG GCATTGCTGAGTGGTATGAGTTGAAGAAGCCCCCTCCCAACCTGTTCAAGATCATCCAGAAAGCTCTGCAAAAAGGCTCTCTCCTTGGCT GCTCCATCGACATCACCAGCGCCGCGGACTCGGAGGCCATCACGTTTCAGAAGCTGGTGAAGGGGCACGCGTACTCGGTCACCGGAGCCG AGGAGGTTGAAAGTAACGGAAGCCTACAGAAACTGATCCGCATCCGAAATCCCTGGGGAGAAGTGGAGTGGACAGGGCGGTGGAATGACA ACTGCCCAAGCTGGAACACTATAGACCCAGAGGAGAGGGAAAGGCTGACCAGACGGCATGAAGATGGAGAATTCTGGATGTCTTTCAGTG ACTTCCTGAGGCACTATTCCCGCCTGGAGATCTGTAACCTGACCCCAGACACTCTCACCAGCGATACCTACAAGAAGTGGAAACTCACCA AAATGGATGGGAACTGGAGGCGGGGCTCCACCGCGGGAGGTTGCAGGAACTACCCGAACACATTCTGGATGAACCCTCAGTACCTGATCA AGCTGGAGGAGGAGGATGAGGACGAGGAGGATGGGGAGAGCGGCTGCACCTTCCTGGTGGGGCTCATTCAGAAGCACCGACGGCGGCAGA GGAAGATGGGCGAGGACATGCACACCATCGGCTTTGGCATCTATGAGGTTCCAGAGGAGTTAAGTGGGCAGACCAACATCCACCTCAGCA AAAACTTCTTCCTGACGAATCGCGCCAGGGAGCGCTCAGACACCTTCATCAACCTCCGGGAGGTGCTCAACCGCTTCAAGCTGCCGCCAG GAGAGTACATTCTCGTGCCTTCCACCTTCGAACCCAACAAGGATGGGGATTTCTGCATCCGGGTCTTTTCTGAAAAGAAAGCTGACTACC AAGCTGTCGATGATGAAATCGAGGCCAATCTTGAAGAGTTCGACATCAGCGAGGATGACATTGATGATGGATTCAGGAGACTGTTTGCCC AGTTGGCAGGAGAGGATGCGGAGATCTCTGCCTTTGAGCTGCAGACCATCCTGAGAAGGGTTCTAGCAAAGCGTTGACATGCTAGATACT GCAGAAGGTTCTCCAAAACAGGTCTTTCCAAGCCTAAAGGAACTGATCTCCAAATTTGAAAAACCAAATCAGGGGATGGTGGTTCACCTT TTAAAGCCAATAAAGAGAACCAGCCCCAGCTTGAGATGGAGAGGATTGAAATTAGAGTTGGAAACATTTGTGAACAGTAACAGCGATTAT GTGGATGTCTTGCCTTGAAGATAAGGCTGCCGGACAAAGCAAGTTGAAGAGATGAGTAACAGTTCTCACTGATGACCCACTTCTGCAGGC ATAGGTCCAGAGCACCAAACTCTAGTGGACAATTCAGACTCTCCTGGTTGTGTAACTGAAGATGTTCTGCCCACCAGCACCAGAGGTCAC TCTCCACATCCCCGCCTCCCAGACATATACCAGGAGCAATTTCAAAACCCTCTCCAGTTTCACTCTTCTTTCTTGGAATGGGACAGCCTG AACATTTTCCCTTTGACTTGTTAAAGGTACCACCCTACATCATGGTTGACACCCTCCTTTGGACCATGCAGTCAGAGGGGCAGCTTTATA CAGAGGAGGGGCACACTTGTCTGTGAGTTTGAAGCCCTGAGTTCCAGTCCTGTGGCTGTGTGACTTTGAACACGTTTCTGCCCATCTCCA GGTCTTAGTTTCTTTGTCTCTGTGGTTGGGTGGGATGATAAACATTGCCCCAGTCTCTCTGTTGAGCCTGCTTGTGTCAGGTGAAGGTGA GGGATCGGGAGTGATGGAGATGCATACAGATCAGCACCTTCTCTGTACCTGCTGGACCCCCATGTGCACCCTTCTCCCTCCAGCCTGGGC TACTCTCCTCCTGGTTCTTTCTAATCTTAAACTTCCTGGTGAGCATTGCCCCAGCCACACTTTCTCCCTGGTTTTGCTTAATTCCACTTA TGCATCAGTCATTTCAACAGCATGAATGTGGTTCTGTACAGTGATGTATGTGGAGATTTCTAAAATATTCTATGTGTGATTTCTGTTCCC AACTAGGTTCTAAGTGCCATCAAAGCACGGTTGGGTCTCCCTTGTATCTTCCACAGTGTGTAGAAATTTGTGCTGCCCAGAGCTGTGCCT AGTTCATAGAAACTGACTGGAAGCACATTGCTGAGGGAGGTTTGTTGAATTGGTTTTTAAGGTTTACTGAAATTGATTTGCTGAATTTTT CTGCTAGTTCAAAATGTGAATTAGGACCTGGTCAGTTTGAAATATACCAAATTCTATGCCCTTTCTCTTACCTATCATCAAATTGTAGTA ATGTATTTCACCCCACTGGACTTATCTTCAGAGTTTTAAAAGAGAGGAGCTCTCGACTTAGAGGTAATATGAACAGATGAACAGACACTG TGGCTGGAGCCCCAAAGTGTGGAGCATTGTGAGATTTGGGGTCACAGCAATTTATGGCTACTATTCCCTGGGTCTGGTAGGTAGGACAAA TGTCCTCTTTTACTTTTCAAAACTGGCTTAGGTATTCATGGACCTTGATTCTTCTATATACATTTTATAATAAATACGTGAAATTGCTTA AAACCTCTTTTTGGAATTTTTAATGAACTTGCAACAAATTTGTAAATAGGAGAGAACTGACGTTCTTGTGATGTTTTCCCATGCATAAAC ATGCCACATCCATGTTCTTGGGTCATCTTTTTTGCCCTTTCATGGAGTCATAAATTTTCCCAACTGAAGTCTTGTATATTCTGTTAGATT AATTCCTATTTCTAGTTGCTGTAAATGATATCTTATGTTTTATTACATTTCTAATAGGATATGGTGTTGGTGAAATGTTAACCCTCTCAT TAGATCTACTAGTTTACCTGTTGATTCTATTGTGTTTTCTATGTAAATGATTTTGTCAGCTATAAATAATAACATTTTATTTTCTCTTTC CTTGCAATACCTATGCTCATTTATTTTTTATGTTTACCCATTGGTTAGGGCCTCCTGTATACATTAAACAGTTCATAGTCATGATAGTGA GTATTCTTACACTGTTCCCAGTATTACAGGGAATGCTTAGAAATTTTCTTTATTTAAACATTATGTTTGTTGTAGCCTTGTTAAAGGCTA TTTTATAATTTTTACTAGAAATATTTTGACATTTATTGTGATTTTTTTCTATCTCTAATCTATTGAGATAGTCACATTCCTTTTGTCTTC ACTCCATTATAAAGGTAAGTTACCTTAATAAAATTGTTGATATCATTTCATC >12877_12877_2_CAPN2-SH2D1B_CAPN2_chr1_223954118_ENST00000433674_SH2D1B_chr1_162368877_ENST00000367929_length(amino acids)=489AA_BP= MANMEICADPQFIIGGATRTDICQGALGDCWLLAAIASLTLNEEILARVVPLNQSFQENYAGIFHFQFWQYGEWVEVVVDDRLPTKDGEL LFVHSAEGSEFWSALLEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWYELKKPPPNLFKIIQKALQKGSLLGCSIDITSAADSEAITF QKLVKGHAYSVTGAEEVESNGSLQKLIRIRNPWGEVEWTGRWNDNCPSWNTIDPEERERLTRRHEDGEFWMSFSDFLRHYSRLEICNLTP DTLTSDTYKKWKLTKMDGNWRRGSTAGGCRNYPNTFWMNPQYLIKLEEEDEDEEDGESGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYE VPEELSGQTNIHLSKNFFLTNRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVFSEKKADYQAVDDEIEANLEEFDI SEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKR -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for CAPN2-SH2D1B |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for CAPN2-SH2D1B |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for CAPN2-SH2D1B |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | CAPN2 | C0023467 | Leukemia, Myelocytic, Acute | 1 | CTD_human |
Hgene | CAPN2 | C0026998 | Acute Myeloid Leukemia, M1 | 1 | CTD_human |
Hgene | CAPN2 | C1879321 | Acute Myeloid Leukemia (AML-M2) | 1 | CTD_human |