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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:CHD6-EFCAB11 (FusionGDB2 ID:HG84181TG90141) |
Fusion Gene Summary for CHD6-EFCAB11 |
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Fusion gene information | Fusion gene name: CHD6-EFCAB11 | Fusion gene ID: hg84181tg90141 | Hgene | Tgene | Gene symbol | CHD6 | EFCAB11 | Gene ID | 84181 | 90141 |
Gene name | chromodomain helicase DNA binding protein 6 | EF-hand calcium binding domain 11 | |
Synonyms | CHD-6|CHD5|RIGB | C14orf143 | |
Cytomap | ('CHD6')('EFCAB11') 20q12 | 14q32.11 | |
Type of gene | protein-coding | protein-coding | |
Description | chromodomain-helicase-DNA-binding protein 6ATP-dependent helicase CHD6helicase C-terminal domain- and SNF2 N-terminal domain-containing proteinradiation-induced gene B protein | EF-hand calcium-binding domain-containing protein 11EF-hand domain-containing protein C14orf143 | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000309279, ENST00000373222, ENST00000373233, ENST00000480022, | ||
Fusion gene scores | * DoF score | 30 X 18 X 11=5940 | 3 X 3 X 2=18 |
# samples | 35 | 3 | |
** MAII score | log2(35/5940*10)=-4.0850361038558 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(3/18*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: CHD6 [Title/Abstract] AND EFCAB11 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | CHD6(40161689)-EFCAB11(90263668), # samples:2 | ||
Anticipated loss of major functional domain due to fusion event. | CHD6-EFCAB11 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. CHD6-EFCAB11 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. CHD6-EFCAB11 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. CHD6-EFCAB11 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. CHD6-EFCAB11 seems lost the major protein functional domain in Hgene partner, which is a epigenetic factor due to the frame-shifted ORF. CHD6-EFCAB11 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | BRCA | TCGA-C8-A12L-01A | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
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Fusion Gene ORF analysis for CHD6-EFCAB11 |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-intron | ENST00000309279 | ENST00000267544 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
5CDS-intron | ENST00000309279 | ENST00000538485 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
5CDS-intron | ENST00000309279 | ENST00000550103 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
5CDS-intron | ENST00000309279 | ENST00000556005 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
5CDS-intron | ENST00000373222 | ENST00000267544 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
5CDS-intron | ENST00000373222 | ENST00000538485 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
5CDS-intron | ENST00000373222 | ENST00000550103 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
5CDS-intron | ENST00000373222 | ENST00000556005 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
5CDS-intron | ENST00000373233 | ENST00000267544 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
5CDS-intron | ENST00000373233 | ENST00000538485 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
5CDS-intron | ENST00000373233 | ENST00000550103 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
5CDS-intron | ENST00000373233 | ENST00000556005 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
Frame-shift | ENST00000309279 | ENST00000316738 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
Frame-shift | ENST00000309279 | ENST00000555872 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
Frame-shift | ENST00000373222 | ENST00000316738 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
Frame-shift | ENST00000373222 | ENST00000555872 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
Frame-shift | ENST00000373222 | ENST00000556609 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
Frame-shift | ENST00000373233 | ENST00000316738 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
Frame-shift | ENST00000373233 | ENST00000555872 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
In-frame | ENST00000309279 | ENST00000556609 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
In-frame | ENST00000373233 | ENST00000556609 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
intron-3CDS | ENST00000480022 | ENST00000316738 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
intron-3CDS | ENST00000480022 | ENST00000555872 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
intron-3CDS | ENST00000480022 | ENST00000556609 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
intron-intron | ENST00000480022 | ENST00000267544 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
intron-intron | ENST00000480022 | ENST00000538485 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
intron-intron | ENST00000480022 | ENST00000550103 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
intron-intron | ENST00000480022 | ENST00000556005 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000373233 | CHD6 | chr20 | 40161689 | - | ENST00000556609 | EFCAB11 | chr14 | 90263668 | - | 920 | 732 | 178 | 813 | 211 |
ENST00000309279 | CHD6 | chr20 | 40161689 | - | ENST00000556609 | EFCAB11 | chr14 | 90263668 | - | 920 | 732 | 178 | 813 | 211 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000373233 | ENST00000556609 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - | 0.00306869 | 0.9969313 |
ENST00000309279 | ENST00000556609 | CHD6 | chr20 | 40161689 | - | EFCAB11 | chr14 | 90263668 | - | 0.00306869 | 0.9969313 |
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Fusion Genomic Features for CHD6-EFCAB11 |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
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Fusion Protein Features for CHD6-EFCAB11 |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr20:40161689/chr14:90263668) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CHD6 | chr20:40161689 | chr14:90263668 | ENST00000373222 | - | 3 | 7 | 93_202 | 219 | 374.0 | Compositional bias | Note=Lys-rich |
Tgene | EFCAB11 | chr20:40161689 | chr14:90263668 | ENST00000316738 | 4 | 6 | 140_151 | 136 | 164.0 | Calcium binding | 1 | |
Tgene | EFCAB11 | chr20:40161689 | chr14:90263668 | ENST00000555872 | 4 | 6 | 140_151 | 112 | 140.0 | Calcium binding | 1 | |
Tgene | EFCAB11 | chr20:40161689 | chr14:90263668 | ENST00000556005 | 0 | 6 | 140_151 | 0 | 119.0 | Calcium binding | 1 | |
Tgene | EFCAB11 | chr20:40161689 | chr14:90263668 | ENST00000555872 | 4 | 6 | 127_162 | 112 | 140.0 | Domain | EF-hand 3 | |
Tgene | EFCAB11 | chr20:40161689 | chr14:90263668 | ENST00000556005 | 0 | 6 | 127_162 | 0 | 119.0 | Domain | EF-hand 3 | |
Tgene | EFCAB11 | chr20:40161689 | chr14:90263668 | ENST00000556005 | 0 | 6 | 18_53 | 0 | 119.0 | Domain | EF-hand 1 | |
Tgene | EFCAB11 | chr20:40161689 | chr14:90263668 | ENST00000556005 | 0 | 6 | 91_126 | 0 | 119.0 | Domain | EF-hand 2 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CHD6 | chr20:40161689 | chr14:90263668 | ENST00000373233 | - | 3 | 37 | 93_202 | 184 | 2716.0 | Compositional bias | Note=Lys-rich |
Hgene | CHD6 | chr20:40161689 | chr14:90263668 | ENST00000373222 | - | 3 | 7 | 1449_1503 | 219 | 374.0 | Domain | Note=Myb-like |
Hgene | CHD6 | chr20:40161689 | chr14:90263668 | ENST00000373222 | - | 3 | 7 | 292_343 | 219 | 374.0 | Domain | Chromo 1 |
Hgene | CHD6 | chr20:40161689 | chr14:90263668 | ENST00000373222 | - | 3 | 7 | 375_439 | 219 | 374.0 | Domain | Chromo 2 |
Hgene | CHD6 | chr20:40161689 | chr14:90263668 | ENST00000373222 | - | 3 | 7 | 473_647 | 219 | 374.0 | Domain | Helicase ATP-binding |
Hgene | CHD6 | chr20:40161689 | chr14:90263668 | ENST00000373222 | - | 3 | 7 | 787_956 | 219 | 374.0 | Domain | Helicase C-terminal |
Hgene | CHD6 | chr20:40161689 | chr14:90263668 | ENST00000373233 | - | 3 | 37 | 1449_1503 | 184 | 2716.0 | Domain | Note=Myb-like |
Hgene | CHD6 | chr20:40161689 | chr14:90263668 | ENST00000373233 | - | 3 | 37 | 292_343 | 184 | 2716.0 | Domain | Chromo 1 |
Hgene | CHD6 | chr20:40161689 | chr14:90263668 | ENST00000373233 | - | 3 | 37 | 375_439 | 184 | 2716.0 | Domain | Chromo 2 |
Hgene | CHD6 | chr20:40161689 | chr14:90263668 | ENST00000373233 | - | 3 | 37 | 473_647 | 184 | 2716.0 | Domain | Helicase ATP-binding |
Hgene | CHD6 | chr20:40161689 | chr14:90263668 | ENST00000373233 | - | 3 | 37 | 787_956 | 184 | 2716.0 | Domain | Helicase C-terminal |
Hgene | CHD6 | chr20:40161689 | chr14:90263668 | ENST00000373222 | - | 3 | 7 | 598_601 | 219 | 374.0 | Motif | Note=DEAH box |
Hgene | CHD6 | chr20:40161689 | chr14:90263668 | ENST00000373233 | - | 3 | 37 | 598_601 | 184 | 2716.0 | Motif | Note=DEAH box |
Hgene | CHD6 | chr20:40161689 | chr14:90263668 | ENST00000373222 | - | 3 | 7 | 486_493 | 219 | 374.0 | Nucleotide binding | ATP |
Hgene | CHD6 | chr20:40161689 | chr14:90263668 | ENST00000373233 | - | 3 | 37 | 486_493 | 184 | 2716.0 | Nucleotide binding | ATP |
Hgene | CHD6 | chr20:40161689 | chr14:90263668 | ENST00000373222 | - | 3 | 7 | 1_747 | 219 | 374.0 | Region | Note=Required for DNA-dependent ATPase activity |
Hgene | CHD6 | chr20:40161689 | chr14:90263668 | ENST00000373233 | - | 3 | 37 | 1_747 | 184 | 2716.0 | Region | Note=Required for DNA-dependent ATPase activity |
Tgene | EFCAB11 | chr20:40161689 | chr14:90263668 | ENST00000316738 | 4 | 6 | 127_162 | 136 | 164.0 | Domain | EF-hand 3 | |
Tgene | EFCAB11 | chr20:40161689 | chr14:90263668 | ENST00000316738 | 4 | 6 | 18_53 | 136 | 164.0 | Domain | EF-hand 1 | |
Tgene | EFCAB11 | chr20:40161689 | chr14:90263668 | ENST00000316738 | 4 | 6 | 91_126 | 136 | 164.0 | Domain | EF-hand 2 | |
Tgene | EFCAB11 | chr20:40161689 | chr14:90263668 | ENST00000555872 | 4 | 6 | 18_53 | 112 | 140.0 | Domain | EF-hand 1 | |
Tgene | EFCAB11 | chr20:40161689 | chr14:90263668 | ENST00000555872 | 4 | 6 | 91_126 | 112 | 140.0 | Domain | EF-hand 2 |
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Fusion Gene Sequence for CHD6-EFCAB11 |
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>16346_16346_1_CHD6-EFCAB11_CHD6_chr20_40161689_ENST00000309279_EFCAB11_chr14_90263668_ENST00000556609_length(transcript)=920nt_BP=732nt ATGACCAATGGGTCTGTGTTTTGGACCGGCGAAGCCCAATGGCGCGACAGGGAAGGCGGGCCCGAGATGGGTTAGGGTGTCCTTGCAGGG TGTCTGAGCTAAACTTCACCAAATAATAGCTGTTTGTATTTTGGCTGCTGCAGGAGCCATTTTAGAAATAAATATCTTCCTTCAATAGAT GAAAATGAAAATACAGAAAAAAGAGAAGCAGTTGTCAAATTTAAAAGTTTTGAATCACTCCCCAATGTCTGATGCCTCTGTCAATTTTGA CTACAAATCTCCATCCCCATTTGACTGCAGCACTGATCAAGAAGAGAAAATTGAAGATGTTGCTAGTCACTGTCTGCCTCAGAAGGACCT GTATACTGCTGAAGAGGAAGCTGCTACCCTTTTTCCTAGGAAAATGACATCCCATAATGGGATGGAGGACAGTGGAGGAGGAGGTACTGG AGTGAAGAAGAAACGGAAGAAAAAGGAGCCAGGAGACCAAGAGGGTGCAGCAAAGGGAAGCAAGGACAGAGAGCCCAAGCCAAAGAGGAA ACGAGAACCGAAAGAGCCAAAGGAACCCAGAAAGGCCAAGGAGCCGAAGAAGGCCAAGGAGCACAAGGAGCCGAAGCAAAAAGATGGGGC AAAGAAGGCACGGAAGCCCCGGGAGGCCTCGGGCACCAAGGAGGCCAAAGAGAAGAGGAGCTGCACTGACTCTGCAGCCAGGACGAAGTC CAGGAAGGCCAGGGAAGTAGATCGAGATTCAGATGGTCACGTCAGCTTTAGAGACTTTGAATATGCCCTGAACTATGGACAGAAGGAAGC CTAACTATTGTGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTAC >16346_16346_1_CHD6-EFCAB11_CHD6_chr20_40161689_ENST00000309279_EFCAB11_chr14_90263668_ENST00000556609_length(amino acids)=211AA_BP=184 MKMKIQKKEKQLSNLKVLNHSPMSDASVNFDYKSPSPFDCSTDQEEKIEDVASHCLPQKDLYTAEEEAATLFPRKMTSHNGMEDSGGGGT GVKKKRKKKEPGDQEGAAKGSKDREPKPKRKREPKEPKEPRKAKEPKKAKEHKEPKQKDGAKKARKPREASGTKEAKEKRSCTDSAARTK -------------------------------------------------------------- >16346_16346_2_CHD6-EFCAB11_CHD6_chr20_40161689_ENST00000373233_EFCAB11_chr14_90263668_ENST00000556609_length(transcript)=920nt_BP=732nt ATGACCAATGGGTCTGTGTTTTGGACCGGCGAAGCCCAATGGCGCGACAGGGAAGGCGGGCCCGAGATGGGTTAGGGTGTCCTTGCAGGG TGTCTGAGCTAAACTTCACCAAATAATAGCTGTTTGTATTTTGGCTGCTGCAGGAGCCATTTTAGAAATAAATATCTTCCTTCAATAGAT GAAAATGAAAATACAGAAAAAAGAGAAGCAGTTGTCAAATTTAAAAGTTTTGAATCACTCCCCAATGTCTGATGCCTCTGTCAATTTTGA CTACAAATCTCCATCCCCATTTGACTGCAGCACTGATCAAGAAGAGAAAATTGAAGATGTTGCTAGTCACTGTCTGCCTCAGAAGGACCT GTATACTGCTGAAGAGGAAGCTGCTACCCTTTTTCCTAGGAAAATGACATCCCATAATGGGATGGAGGACAGTGGAGGAGGAGGTACTGG AGTGAAGAAGAAACGGAAGAAAAAGGAGCCAGGAGACCAAGAGGGTGCAGCAAAGGGAAGCAAGGACAGAGAGCCCAAGCCAAAGAGGAA ACGAGAACCGAAAGAGCCAAAGGAACCCAGAAAGGCCAAGGAGCCGAAGAAGGCCAAGGAGCACAAGGAGCCGAAGCAAAAAGATGGGGC AAAGAAGGCACGGAAGCCCCGGGAGGCCTCGGGCACCAAGGAGGCCAAAGAGAAGAGGAGCTGCACTGACTCTGCAGCCAGGACGAAGTC CAGGAAGGCCAGGGAAGTAGATCGAGATTCAGATGGTCACGTCAGCTTTAGAGACTTTGAATATGCCCTGAACTATGGACAGAAGGAAGC CTAACTATTGTGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTAC >16346_16346_2_CHD6-EFCAB11_CHD6_chr20_40161689_ENST00000373233_EFCAB11_chr14_90263668_ENST00000556609_length(amino acids)=211AA_BP=184 MKMKIQKKEKQLSNLKVLNHSPMSDASVNFDYKSPSPFDCSTDQEEKIEDVASHCLPQKDLYTAEEEAATLFPRKMTSHNGMEDSGGGGT GVKKKRKKKEPGDQEGAAKGSKDREPKPKRKREPKEPKEPRKAKEPKKAKEHKEPKQKDGAKKARKPREASGTKEAKEKRSCTDSAARTK -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for CHD6-EFCAB11 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for CHD6-EFCAB11 |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for CHD6-EFCAB11 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | CHD6 | C0005684 | Malignant neoplasm of urinary bladder | 1 | CTD_human |
Hgene | CHD6 | C0005695 | Bladder Neoplasm | 1 | CTD_human |
Hgene | CHD6 | C0007138 | Carcinoma, Transitional Cell | 1 | CTD_human |
Hgene | CHD6 | C0027819 | Neuroblastoma | 1 | CTD_human |
Hgene | CHD6 | C0033578 | Prostatic Neoplasms | 1 | CTD_human |
Hgene | CHD6 | C0376358 | Malignant neoplasm of prostate | 1 | CTD_human |
Tgene | C0036341 | Schizophrenia | 1 | PSYGENET |