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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:CMAHP-KANSL1 (FusionGDB2 ID:HG8418TG284058) |
Fusion Gene Summary for CMAHP-KANSL1 |
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Fusion gene information | Fusion gene name: CMAHP-KANSL1 | Fusion gene ID: hg8418tg284058 | Hgene | Tgene | Gene symbol | CMAHP | KANSL1 | Gene ID | 8418 | 284058 |
Gene name | KAT8 regulatory NSL complex subunit 1 | ||
Synonyms | CENP-36|KDVS|KIAA1267|MSL1v1|NSL1|hMSL1v1 | ||
Cytomap | ('CMAHP')('KANSL1') | 17q21.31 | |
Type of gene | protein-coding | ||
Description | KAT8 regulatory NSL complex subunit 1MLL1/MLL complex subunit KANSL1MSL1 homolog 1NSL complex protein NSL1centromere protein 36male-specific lethal 1 homolognon-specific lethal 1 homolog | ||
Modification date | 20200327 | ||
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000377989, | ||
Fusion gene scores | * DoF score | 5 X 5 X 2=50 | 17 X 18 X 11=3366 |
# samples | 5 | 28 | |
** MAII score | log2(5/50*10)=0 | log2(28/3366*10)=-3.58753644438498 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: CMAHP [Title/Abstract] AND KANSL1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | CMAHP(25106952)-KANSL1(44228994), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | KANSL1 | GO:0043981 | histone H4-K5 acetylation | 20018852 |
Tgene | KANSL1 | GO:0043982 | histone H4-K8 acetylation | 20018852 |
Tgene | KANSL1 | GO:0043984 | histone H4-K16 acetylation | 20018852 |
![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
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Fusion Gene ORF analysis for CMAHP-KANSL1 |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
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Fusion Genomic Features for CMAHP-KANSL1 |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
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Fusion Protein Features for CMAHP-KANSL1 |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/:25106952/:44228994) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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Fusion Gene Sequence for CMAHP-KANSL1 |
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Fusion Gene PPI Analysis for CMAHP-KANSL1 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for CMAHP-KANSL1 |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for CMAHP-KANSL1 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | C0020796 | Profound Mental Retardation | 2 | CTD_human | |
Tgene | C0025363 | Mental Retardation, Psychosocial | 2 | CTD_human | |
Tgene | C0026825 | Flaccid Muscle Tone | 2 | CTD_human | |
Tgene | C0026827 | Muscle hypotonia | 2 | CTD_human | |
Tgene | C0376634 | Craniofacial Abnormalities | 2 | CTD_human | |
Tgene | C0427201 | Floppy Muscles | 2 | CTD_human | |
Tgene | C0427202 | Muscle Tone Atonic | 2 | CTD_human | |
Tgene | C0751330 | Unilateral Hypotonia | 2 | CTD_human | |
Tgene | C0917816 | Mental deficiency | 2 | CTD_human | |
Tgene | C1864871 | Chromosome 17q21.31 Deletion Syndrome | 2 | CTD_human;GENOMICS_ENGLAND;ORPHANET | |
Tgene | C2267233 | Neonatal Hypotonia | 2 | CTD_human | |
Tgene | C2931713 | Chromosome 17 deletion | 2 | CTD_human | |
Tgene | C3683846 | Chromosome 17p Deletion Syndrome | 2 | CTD_human | |
Tgene | C3714756 | Intellectual Disability | 2 | CTD_human | |
Tgene | C0010606 | Adenoid Cystic Carcinoma | 1 | CTD_human | |
Tgene | C0919267 | ovarian neoplasm | 1 | CTD_human | |
Tgene | C1140680 | Malignant neoplasm of ovary | 1 | CTD_human | |
Tgene | C1860789 | Leukemia, Megakaryoblastic, of Down Syndrome | 1 | CTD_human |