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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:AIM2-PHKB (FusionGDB2 ID:HG9447TG5257) |
Fusion Gene Summary for AIM2-PHKB |
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Fusion gene information | Fusion gene name: AIM2-PHKB | Fusion gene ID: hg9447tg5257 | Hgene | Tgene | Gene symbol | AIM2 | PHKB | Gene ID | 9447 | 5257 |
Gene name | absent in melanoma 2 | phosphorylase kinase regulatory subunit beta | |
Synonyms | PYHIN4 | - | |
Cytomap | ('AIM2')('PHKB') 1q23.1-q23.2 | 16q12.1 | |
Type of gene | protein-coding | protein-coding | |
Description | interferon-inducible protein AIM2 | phosphorylase b kinase regulatory subunit betaphosphorylase kinase beta-subunitphosphorylase kinase subunit betaphosphorylase kinase, beta | |
Modification date | 20200313 | 20200313 | |
UniProtAcc | O14862 | . | |
Ensembl transtripts involved in fusion gene | ENST00000368130, ENST00000411768, | ||
Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 13 X 17 X 9=1989 |
# samples | 2 | 15 | |
** MAII score | log2(2/8*10)=1.32192809488736 | log2(15/1989*10)=-3.72900887033786 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: AIM2 [Title/Abstract] AND PHKB [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | AIM2(159046423)-PHKB(47497810), # samples:1 | ||
Anticipated loss of major functional domain due to fusion event. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | AIM2 | GO:0002218 | activation of innate immune response | 19158675|19158676|19158679 |
Hgene | AIM2 | GO:0032088 | negative regulation of NF-kappaB transcription factor activity | 16432157 |
Hgene | AIM2 | GO:0032731 | positive regulation of interleukin-1 beta production | 19158675|19158676|19158679 |
Hgene | AIM2 | GO:0033209 | tumor necrosis factor-mediated signaling pathway | 16432157 |
Hgene | AIM2 | GO:0035690 | cellular response to drug | 19158679 |
Hgene | AIM2 | GO:0044546 | NLRP3 inflammasome complex assembly | 19158676 |
Hgene | AIM2 | GO:0050718 | positive regulation of interleukin-1 beta secretion | 19158679 |
Hgene | AIM2 | GO:0051092 | positive regulation of NF-kappaB transcription factor activity | 19158675 |
Hgene | AIM2 | GO:0070269 | pyroptosis | 19158675|19158676 |
Hgene | AIM2 | GO:1904270 | pyroptosome complex assembly | 19158676 |
Hgene | AIM2 | GO:2001056 | positive regulation of cysteine-type endopeptidase activity | 19158676|19158679 |
![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | STAD | TCGA-D7-8570-01A | AIM2 | chr1 | 159046423 | - | PHKB | chr16 | 47497810 | + |
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Fusion Gene ORF analysis for AIM2-PHKB |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5UTR-5UTR | ENST00000368130 | ENST00000455779 | AIM2 | chr1 | 159046423 | - | PHKB | chr16 | 47497810 | + |
5UTR-5UTR | ENST00000368130 | ENST00000566044 | AIM2 | chr1 | 159046423 | - | PHKB | chr16 | 47497810 | + |
5UTR-intron | ENST00000368130 | ENST00000299167 | AIM2 | chr1 | 159046423 | - | PHKB | chr16 | 47497810 | + |
5UTR-intron | ENST00000368130 | ENST00000323584 | AIM2 | chr1 | 159046423 | - | PHKB | chr16 | 47497810 | + |
5UTR-intron | ENST00000368130 | ENST00000567402 | AIM2 | chr1 | 159046423 | - | PHKB | chr16 | 47497810 | + |
intron-5UTR | ENST00000411768 | ENST00000455779 | AIM2 | chr1 | 159046423 | - | PHKB | chr16 | 47497810 | + |
intron-5UTR | ENST00000411768 | ENST00000566044 | AIM2 | chr1 | 159046423 | - | PHKB | chr16 | 47497810 | + |
intron-intron | ENST00000411768 | ENST00000299167 | AIM2 | chr1 | 159046423 | - | PHKB | chr16 | 47497810 | + |
intron-intron | ENST00000411768 | ENST00000323584 | AIM2 | chr1 | 159046423 | - | PHKB | chr16 | 47497810 | + |
intron-intron | ENST00000411768 | ENST00000567402 | AIM2 | chr1 | 159046423 | - | PHKB | chr16 | 47497810 | + |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
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Fusion Genomic Features for AIM2-PHKB |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
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Fusion Protein Features for AIM2-PHKB |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/:159046423/:47497810) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
AIM2 | . |
FUNCTION: Involved in innate immune response by recognizing cytosolic double-stranded DNA and inducing caspase-1-activating inflammasome formation in macrophages. Upon binding to DNA is thought to undergo oligomerization and to associate with PYCARD initiating the recruitment of caspase-1 precusrsor and processing of interleukin-1 beta and interleukin-18. Detects cytosolic dsDNA of viral and bacterial origin in a non-sequence-specific manner. Can also trigger PYCARD-dependent, caspase-1-independent cell death that involves caspase-8 (By similarity). Tumor suppressor which may act by repressing NF-kappa-B transcriptional activity. {ECO:0000250, ECO:0000269|PubMed:16432157, ECO:0000269|PubMed:17726700, ECO:0000269|PubMed:19158675, ECO:0000269|PubMed:19158676, ECO:0000269|PubMed:19158679, ECO:0000269|PubMed:20566831}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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Fusion Gene Sequence for AIM2-PHKB |
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Fusion Gene PPI Analysis for AIM2-PHKB |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for AIM2-PHKB |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for AIM2-PHKB |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | C0543514 | Glycogen Storage Disease IXB | 2 | CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT | |
Tgene | C0017919 | Glycogen Storage Disease | 1 | GENOMICS_ENGLAND |