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![]() | Fusion Gene Summary |
![]() | Fusion Gene ORF analysis |
![]() | Fusion Genomic Features |
![]() | Fusion Protein Features |
![]() | Fusion Gene Sequence |
![]() | Fusion Gene PPI analysis |
![]() | Related Drugs |
![]() | Related Diseases |
Fusion gene:ATG5-SYNJ2 (FusionGDB2 ID:HG9474TG8871) |
Fusion Gene Summary for ATG5-SYNJ2 |
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Fusion gene information | Fusion gene name: ATG5-SYNJ2 | Fusion gene ID: hg9474tg8871 | Hgene | Tgene | Gene symbol | ATG5 | SYNJ2 | Gene ID | 9474 | 8871 |
Gene name | autophagy related 5 | synaptojanin 2 | |
Synonyms | APG5|APG5-LIKE|APG5L|ASP|SCAR25|hAPG5 | INPP5H | |
Cytomap | ('ATG5')('SYNJ2') 6q21 | 6q25.3 | |
Type of gene | protein-coding | protein-coding | |
Description | autophagy protein 5APG5 autophagy 5-likeATG5 autophagy related 5 homologapoptosis-specific protein | synaptojanin-2inositol phosphate 5'-phosphatase 2inositol polyphosphate-5-phosphatase Hphosphoinositide 5-phosphatasesynaptic inositol 1,4,5-trisphosphate 5-phosphatase 2 | |
Modification date | 20200313 | 20200327 | |
UniProtAcc | . | . | |
Ensembl transtripts involved in fusion gene | ENST00000343245, ENST00000360666, ENST00000369070, ENST00000369076, ENST00000475645, | ||
Fusion gene scores | * DoF score | 25 X 16 X 9=3600 | 8 X 8 X 6=384 |
# samples | 29 | 8 | |
** MAII score | log2(29/3600*10)=-3.6338721012021 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(8/384*10)=-2.26303440583379 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ATG5 [Title/Abstract] AND SYNJ2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Most frequent breakpoint | ATG5(106763976)-SYNJ2(158502141), # samples:3 | ||
Anticipated loss of major functional domain due to fusion event. | ATG5-SYNJ2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ATG5-SYNJ2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. ATG5-SYNJ2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. ATG5-SYNJ2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. ATG5-SYNJ2 seems lost the major protein functional domain in Tgene partner, which is a cell metabolism gene due to the frame-shifted ORF. ATG5-SYNJ2 seems lost the major protein functional domain in Tgene partner, which is a IUPHAR drug target due to the frame-shifted ORF. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
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Partner | Gene | GO ID | GO term | PubMed ID |
![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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![]() * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChimerDB4 | LUSC | TCGA-66-2788-01A | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
ChimerDB4 | LUSC | TCGA-66-2788 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
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Fusion Gene ORF analysis for ATG5-SYNJ2 |
![]() * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
5CDS-5UTR | ENST00000343245 | ENST00000367112 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
5CDS-5UTR | ENST00000360666 | ENST00000367112 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
5CDS-5UTR | ENST00000369070 | ENST00000367112 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
5CDS-5UTR | ENST00000369076 | ENST00000367112 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
5CDS-intron | ENST00000343245 | ENST00000449859 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
5CDS-intron | ENST00000360666 | ENST00000449859 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
5CDS-intron | ENST00000369070 | ENST00000449859 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
5CDS-intron | ENST00000369076 | ENST00000449859 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
Frame-shift | ENST00000343245 | ENST00000355585 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
Frame-shift | ENST00000343245 | ENST00000367121 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
Frame-shift | ENST00000343245 | ENST00000367122 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
Frame-shift | ENST00000360666 | ENST00000355585 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
Frame-shift | ENST00000360666 | ENST00000367121 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
Frame-shift | ENST00000360666 | ENST00000367122 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
Frame-shift | ENST00000369070 | ENST00000355585 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
Frame-shift | ENST00000369070 | ENST00000367121 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
Frame-shift | ENST00000369070 | ENST00000367122 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
In-frame | ENST00000369076 | ENST00000355585 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
In-frame | ENST00000369076 | ENST00000367121 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
In-frame | ENST00000369076 | ENST00000367122 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
intron-3CDS | ENST00000475645 | ENST00000355585 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
intron-3CDS | ENST00000475645 | ENST00000367121 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
intron-3CDS | ENST00000475645 | ENST00000367122 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
intron-5UTR | ENST00000475645 | ENST00000367112 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
intron-intron | ENST00000475645 | ENST00000449859 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
ENST00000369076 | ATG5 | chr6 | 106763976 | - | ENST00000367121 | SYNJ2 | chr6 | 158502141 | + | 1732 | 432 | 406 | 1731 | 442 |
ENST00000369076 | ATG5 | chr6 | 106763976 | - | ENST00000367122 | SYNJ2 | chr6 | 158502141 | + | 5030 | 432 | 406 | 2220 | 604 |
ENST00000369076 | ATG5 | chr6 | 106763976 | - | ENST00000355585 | SYNJ2 | chr6 | 158502141 | + | 5168 | 432 | 406 | 2355 | 649 |
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Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
ENST00000369076 | ENST00000367121 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + | 0.00872359 | 0.9912764 |
ENST00000369076 | ENST00000367122 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + | 0.00041352 | 0.9995865 |
ENST00000369076 | ENST00000355585 | ATG5 | chr6 | 106763976 | - | SYNJ2 | chr6 | 158502141 | + | 0.000802225 | 0.9991978 |
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Fusion Genomic Features for ATG5-SYNJ2 |
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Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
ATG5 | chr6 | 106763975 | - | SYNJ2 | chr6 | 158502140 | + | 6.02E-12 | 1 |
ATG5 | chr6 | 106763975 | - | SYNJ2 | chr6 | 158502140 | + | 6.02E-12 | 1 |
ATG5 | chr6 | 106763975 | - | SYNJ2 | chr6 | 158502140 | + | 6.02E-12 | 1 |
ATG5 | chr6 | 106763975 | - | SYNJ2 | chr6 | 158502140 | + | 6.02E-12 | 1 |
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Fusion Protein Features for ATG5-SYNJ2 |
![]() Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr6:106763976/chr6:158502141) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
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Hgene | Tgene |
. | . |
FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
![]() * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | SYNJ2 | chr6:106763976 | chr6:158502141 | ENST00000355585 | 17 | 27 | 1099_1114 | 855 | 1497.0 | Compositional bias | Note=Pro-rich | |
Tgene | SYNJ2 | chr6:106763976 | chr6:158502141 | ENST00000355585 | 17 | 27 | 1209_1334 | 855 | 1497.0 | Compositional bias | Note=Pro-rich | |
Tgene | SYNJ2 | chr6:106763976 | chr6:158502141 | ENST00000367121 | 17 | 27 | 1099_1114 | 855 | 1289.0 | Compositional bias | Note=Pro-rich | |
Tgene | SYNJ2 | chr6:106763976 | chr6:158502141 | ENST00000367121 | 17 | 27 | 1209_1334 | 855 | 1289.0 | Compositional bias | Note=Pro-rich | |
Tgene | SYNJ2 | chr6:106763976 | chr6:158502141 | ENST00000355585 | 17 | 27 | 889_968 | 855 | 1497.0 | Domain | RRM | |
Tgene | SYNJ2 | chr6:106763976 | chr6:158502141 | ENST00000367121 | 17 | 27 | 889_968 | 855 | 1289.0 | Domain | RRM |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | SYNJ2 | chr6:106763976 | chr6:158502141 | ENST00000355585 | 17 | 27 | 120_444 | 855 | 1497.0 | Domain | SAC | |
Tgene | SYNJ2 | chr6:106763976 | chr6:158502141 | ENST00000367121 | 17 | 27 | 120_444 | 855 | 1289.0 | Domain | SAC |
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Fusion Gene Sequence for ATG5-SYNJ2 |
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>7605_7605_1_ATG5-SYNJ2_ATG5_chr6_106763976_ENST00000369076_SYNJ2_chr6_158502141_ENST00000355585_length(transcript)=5168nt_BP=432nt CTGGACTTGTGGTGCGCTGCCAGGGCTCCGCAGCGTTGCCGGTTGTATTCGCTGGATACCAGAGGGCGGAAGTGCAGCAGGGTTCAGCTC CGACCTCCGCGCCGGTGCTTTTTGCGGCTGCGCGGGCTTCCTGGAGTCCTGCTACCGCGTCCCCGCAGGACAGTGTGTCAGGCGGGCAGC TTGCCCCGCCGCCCCACCGGAGCGCGGAATCTGGGCGTCCCCACCAGTGCGGGGAGCCGGAAGGAGGAGCCATAGCTTGGAGTAGGTTTG GCTTTGGTTGAAATAAGAATTTAGCCTGTATGTACTGCTTTAACTCCTGGAAGAATGACAGATGACAAAGATGTGCTTCGAGATGTGTGG TTTGGACGAATTCCAACTTGTTTCACGCTATATCAGGATGAGATAACTGAAAGGGAAGCAGAACCATACTATACCTGTGCTGGCGATCGT GGAGGTGGAAGTTCAGGAAGTCGATGTGGGTGCTCGGGAGAGGGTTTTCCAGGAAGTGTCCTCCTTCCAGGGCCCCCTGGATGCCACTGT TGTAGTAAACCTTCAATCACCGACCTTAGAAGAGAAAAACGAGTTTCCAGAGGACCTGCGTACTGAGCTCATGCAGACCTTGGGGAGTTA TGGGACAATTGTTCTTGTCAGGATCAACCAAGGGCAGATGCTGGTAACTTTTGCAGACAGTCACTCGGCTCTCAGTGTCCTGGACGTGGA CGGTATGAAGGTGAAAGGCAGAGCAGTGAAGATTAGACCGAAGACCAAGGACTGGCTGAAAGGTTTGCGAGAGGAGATCATTCGGAAACG AGACAGCATGGCCCCCGTGTCTCCCACTGCCAACTCCTGTTTGCTGGAGGAAAACTTTGACTTCACAAGTTTGGACTATGAGTCAGAAGG GGATATTCTTGAAGACGATGAAGACTACTTGGTGGATGAATTCAATCAGCCTGGAGTCTCGGACAGTGAACTCGGGGGAGACGACCTCTC TGATGTCCCCGGCCCCACAGCACTGGCTCCTCCCAGCAAGTCACCTGCTCTCACCAAAAAGAAGCAGCATCCAACGTACAAAGATGACGC GGACCTGGTGGAGCTCAAGCGGGAGCTGGAAGCCGTCGGGGAGTTCCGCCACCGTTCTCCGAGCAGGTCTCTGTCGGTCCCCAACCGGCC TCGGCCACCTCAACCCCCGCAGAGACCCCCCCCTCCAACCGGTTTAATGGTGAAAAAGTCGGCTTCAGATGCGTCCATCTCCTCCGGCAC CCATGGACAGTATTCAATTTTGCAGACGGCAAGACTTCTACCAGGAGCACCTCAGCAACCTCCCAAGGCTCGGACTGGAATAAGTAAACC TTATAATGTCAAGCAGATCAAAACCACCAATGCCCAGGAGGCAGAAGCAGCAATCCGGTGTCTCCTGGAAGCCAGAGGAGGTGCCTCCGA AGAAGCCCTAAGTGCCGTGGCCCCAAGGGACCTTGAAGCATCCTCTGAACCAGAGCCCACACCGGGGGCAGCCAAACCAGAGACCCCACA GGCGCCCCCACTCCTTCCCCGTCGGCCCCCACCCAGAGTTCCTGCCATCAAGAAGCCAACCTTGAGAAGGACAGGAAAGCCCCTGTCACC GGAAGAACAGTTTGAGCAACAGACTGTCCATTTTACAATCGGGCCCCCGGAGACAAGCGTTGAGGCCCCTCCTGTCGTGACAGCCCCTCG AGTCCCTCCTGTTCCCAAACCAAGAACATTTCAGCCTGGGAAAGCTGCAGAGAGGCCAAGCCACAGGAAGCCAGCATCAGACGAAGCCCC TCCTGGGGCAGGAGCCTCTGTGCCACCACCTCTGGAGGCGCCGCCTCTTGTGCCCAAGGTACCCCCGAGGAGGAAGAAGTCAGCCCCCGC AGCCTTCCACCTGCAGGTCCTGCAGAGCAACAGCCAGCTTCTCCAGGGCCTCACTTACAATAGCAGTGACAGCCCCTCTGGGCACCCACC TGCCGCGGGCACCGTCTTCCCACAAGGGGACTTTCTCAGCACTTCATCTGCTACAAGCCCCGACAGCGATGGCACCAAAGCGATGAAGCC AGAGGCAGCCCCACTTCTTGGTGATTATCAGGACCCCTTCTGGAACCTTCTTCACCACCCTAAACTGTTGAATAACACTTGGCTTTCTAA GAGCTCAGACCCTTTGGACTCAGGAACCAGGAGCCCCAAAAGAGATCCCATAGACCCAGTGTCAGCTGGCGCTTCAGCTGCCAAGGCAGA GCTGCCACCAGATCATGAACACAAAACCTTAGGTCACTGGGTGACAATCAGTGACCAAGAAAAGAGGACAGCACTGCAGGTGTTTGACCC ACTGGCAAAAACATGACTGAGCAGCTTTGAAGGCTGCAGTCCTATAGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAG ACATCTATTTAAAGGCACACTGGCCAAAACGTTTGTGCATCTGTCACTCTCGTGTAGTTTACAAAAATCGTGTCTCTTATTCAGTAAGAT GGTTACTCAGCCACCAAAATATATTTCACTCAAGGCTTGTACATCTGAAGTTTGCTCTTCAAGGAATGGGAACCTTCCTGTTAAATTCGG TGTATGGATTTTAAGAAAGGAATCTAGCCAATGAGGTCCAAGAAGTTCTCACCCATTGAATTTTTAAATGGCTGTTCAGTTCATGTTGTA CGTGATGGAGATTTGTCTTTTGTTTTATTTGCATTTTACAGATTTGGTATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTA AGGATTAGAGAAAGAGGTCGTTGTGACCATTAGTAGCTGTCCTGGCCCACTTAAACAAGGTTACAAAAAATCAGAGTCGGAAGCAGCCAA ATAGGTCAACCTAATGACTAGACTGTACATTCCCATGAGCCTTCATGTTTAAGTGTGTACATGTGCGTTAACCTTGATGATGCGTGAATC CCGAGGGAGCCGGTGGCATACACCGTTAGCTTAACCTTAGCTTAAACTAGCTGAAGGCTCCTGTGCCATGTCTTAGACATTGCATGCCCT ATCAATTACTATAATCCTGAGCCATGGTGTGCTACTGAAACCAATTTTTATCCACCATCTAGTCCTTATTAAATGAAACCTCACGGATCC TTTGTTCCGCTTATATTCCATGCATACCACATAAAAGCACACAGTGCGAAAACTCTTGCTGATACGCGATATTGATTCTCATTGTTAGAA TATGGAGAGTGTTTCAGCCTCGTCTGTCCGGCTGGAGCTTCGGGATGGAAAGTGCTATGTGTCCCTGCATATAAGAATCACCAGGCCAGT GTTTCTGGGTTTGCTTGTCTATATGTTTGTCTATATTTTTTGCCTATACATTTTTCCCACGTTTCCAACAGCACTTCTCACCTATTCAAT AACTGAAAAAGACATTACCATAGTGCTTTACATTTTTAAAGTAATGTTACAAGGTCTGGAATCCATTTGGAGCAGATACCGTGTTTTCGC TATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGTTGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTGATCAAG TGTCATCCCTTACGTGACTGGGGGATGTCTGTCCTAAAAGCTGACTGCTAGGATAGTAAGGATCATCTTGCCTGGGCTATGCCACTGTCT TGTTACCAATTAGACATCTGGAATTTCATAATTAGTTTTCATTGTCACTGTCAAGATATATTGCAGATTACTTAAATATGGCCATCAAAA CAAAAGTTACAACACGTATCTCTTTTCATCTGAAAACTAATACCTGGAAAAGGATAAAAAAAAAAAGGAATCCGTGACCCACAGAGCTAG ACAGATAAGATGCATAGTTGACCAGTCATAAAAGGCGGTGTTTAGGTGATCAGGATGCCGTTGGTGGCATTTACGTGCTTTATATGATTT TTACCTCTGTAACAAACACAAGAAATAAACAGAATGGTCCTTAACAGAGTTTGGGGGAGAGAGCAAGATGGGTTCCTTGGAGAAGCTGAT TTGCCAAGATGCACATCGCTATTAACAGCCAGAGTCATAAATGAAATGAAATTGAAGAATTCATTCAAATGCTCTTTTCCCTATAACCTC TTTTCTCACCAAAAAGGAGATAAATTTGAAAACAGATAAATGTAACAACCAGTCAAAGAAGCAGGGGAAAAGTAAGCTCCTCCAAAGTTG CTTGCAGTGCTGGAAATAGATCTCATTTTTAGGTTTTCTCTTCGTTCCAGATACCAAATAAATGGGACAGAGAATAAAATTTTTGTTAAA ATATGTGCTCATCTCCTAAGTAGCTCTTCAGAGTCTGACCGTAAGTAAAAACACACAGAATTGTGTTGACTGGGGGAGGTGAATCACAAA AAAGTTACGAGGAGTTTAAGAGTTAAATATTATTTGATCGTGGCTGTCAAATTTAGTGAACAACATAGATTGGATTTGGAGTTGGTAGTA GGTATGGTTCTCATACCAGAATTCTCTTAAAAAAAAAAAAAAGGACAATTGGAATTGCCTTATTTATTTTTAAAATCAATGCTTACTAGT TGGTAGGATTCCCAGGTCAGCAGCAGGGTTGATTAAATAATCTTGACAATGAGCAGCTGCCATCTTGGGGGATTTCATTCTGTGGTTTTT TAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTGACCTTGTAGCCTATTTTGTTCCTGCTGTTCTCTAACATGGTGCAG TTCACGCAGACTGGTTTAGGTACTTCACAACTCACCATTGTCTCTCTGACCCCAAGCCTAGTCCCTTTTACATCACCATCTTCTCAGACT TCTTGCCTATTCTTAAAATATGTTTTGGTTAATGATTGAATTAGGACATCAGCTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGT TCAAGGCACATAATAAAATTCTCCCTGATGTGTGTGTAAGTATAAACAAAGTAATGTATCAAAGCGTTCACTTTATAATGAAGTCATTTC ATTGGGAAGGAAAGCTGCAAAGATTATTGGGGGACTAGTGATTAATAAAATCCTGTAATATTTTTGAAGTGAAAATTTGTACTGAAATTG >7605_7605_1_ATG5-SYNJ2_ATG5_chr6_106763976_ENST00000369076_SYNJ2_chr6_158502141_ENST00000355585_length(amino acids)=649AA_BP=9 MKGKQNHTIPVLAIVEVEVQEVDVGARERVFQEVSSFQGPLDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRINQGQMLV TFADSHSALSVLDVDGMKVKGRAVKIRPKTKDWLKGLREEIIRKRDSMAPVSPTANSCLLEENFDFTSLDYESEGDILEDDEDYLVDEFN QPGVSDSELGGDDLSDVPGPTALAPPSKSPALTKKKQHPTYKDDADLVELKRELEAVGEFRHRSPSRSLSVPNRPRPPQPPQRPPPPTGL MVKKSASDASISSGTHGQYSILQTARLLPGAPQQPPKARTGISKPYNVKQIKTTNAQEAEAAIRCLLEARGGASEEALSAVAPRDLEASS EPEPTPGAAKPETPQAPPLLPRRPPPRVPAIKKPTLRRTGKPLSPEEQFEQQTVHFTIGPPETSVEAPPVVTAPRVPPVPKPRTFQPGKA AERPSHRKPASDEAPPGAGASVPPPLEAPPLVPKVPPRRKKSAPAAFHLQVLQSNSQLLQGLTYNSSDSPSGHPPAAGTVFPQGDFLSTS SATSPDSDGTKAMKPEAAPLLGDYQDPFWNLLHHPKLLNNTWLSKSSDPLDSGTRSPKRDPIDPVSAGASAAKAELPPDHEHKTLGHWVT -------------------------------------------------------------- >7605_7605_2_ATG5-SYNJ2_ATG5_chr6_106763976_ENST00000369076_SYNJ2_chr6_158502141_ENST00000367121_length(transcript)=1732nt_BP=432nt CTGGACTTGTGGTGCGCTGCCAGGGCTCCGCAGCGTTGCCGGTTGTATTCGCTGGATACCAGAGGGCGGAAGTGCAGCAGGGTTCAGCTC CGACCTCCGCGCCGGTGCTTTTTGCGGCTGCGCGGGCTTCCTGGAGTCCTGCTACCGCGTCCCCGCAGGACAGTGTGTCAGGCGGGCAGC TTGCCCCGCCGCCCCACCGGAGCGCGGAATCTGGGCGTCCCCACCAGTGCGGGGAGCCGGAAGGAGGAGCCATAGCTTGGAGTAGGTTTG GCTTTGGTTGAAATAAGAATTTAGCCTGTATGTACTGCTTTAACTCCTGGAAGAATGACAGATGACAAAGATGTGCTTCGAGATGTGTGG TTTGGACGAATTCCAACTTGTTTCACGCTATATCAGGATGAGATAACTGAAAGGGAAGCAGAACCATACTATACCTGTGCTGGCGATCGT GGAGGTGGAAGTTCAGGAAGTCGATGTGGGTGCTCGGGAGAGGGTTTTCCAGGAAGTGTCCTCCTTCCAGGGCCCCCTGGATGCCACTGT TGTAGTAAACCTTCAATCACCGACCTTAGAAGAGAAAAACGAGTTTCCAGAGGACCTGCGTACTGAGCTCATGCAGACCTTGGGGAGTTA TGGGACAATTGTTCTTGTCAGGATCAACCAAGGGCAGATGCTGGTAACTTTTGCAGACAGTCACTCGGCTCTCAGTGTCCTGGACGTGGA CGGTATGAAGGTGAAAGGCAGAGCAGTGAAGATTAGACCGAAGACCAAGGACTGGCTGAAAGGTTTGCGAGAGGAGATCATTCGGAAACG AGACAGCATGGCCCCCGTGTCTCCCACTGCCAACTCCTGTTTGCTGGAGGAAAACTTTGACTTCACAAGTTTGGACTATGAGTCAGAAGG GGATATTCTTGAAGACGATGAAGACTACTTGGTGGATGAATTCAATCAGCCTGGAGTCTCGGACAGTGAACTCGGGGGAGACGACCTCTC TGATGTCCCCGGCCCCACAGCACTGGCTCCTCCCAGCAAGTCACCTGCTCTCACCAAAAAGAAGCAGCATCCAACGTACAAAGATGACGC GGACCTGGTGGAGCTCAAGCGGGAGCTGGAAGCCGTCGGGGAGTTCCGCCACCGTTCTCCGAGCAGGTCTCTGTCGGTCCCCAACCGGCC TCGGCCACCTCAACCCCCGCAGAGACCCCCCCCTCCAACCGGTTTAATGGTGAAAAAGTCGGCTTCAGATGCGTCCATCTCCTCCGGCAC CCATGGACAGTATTCAATTTTGCAGACGGCAAGACTTCTACCAGGAGCACCTCAGCAACCTCCCAAGGCTCGGACTGGAATAAGTAAACC TTATAATGTCAAGCAGATCAAAACCACCAATGCCCAGGAGGCAGAAGCAGCAATCCGGTGTCTCCTGGAAGCCAGAGGAGGTGCCTCCGA AGAAGCCCTAAGTGCCGTGGCCCCAAGGGACCTTGAAGCATCCTCTGAACCAGAGCCCACACCGGGGGCAGCCAAACCAGAGACCCCACA GGCGCCCCCACTCCTTCCCCGTCGGCCCCCACCCAGAGTTCCTGCCATCAAGAAGCCAACCTTGAGAAGGACAGGAAAGATTGTTTTTTG CTCTCGCTCTCAAGCTTCTCAGCCTTGCTTACTGCTTCAAAGACATGAGTTTGTAAGGACAGTAGCAGCCCAAAGACTGGCATCTGTAGA >7605_7605_2_ATG5-SYNJ2_ATG5_chr6_106763976_ENST00000369076_SYNJ2_chr6_158502141_ENST00000367121_length(amino acids)=442AA_BP=9 MKGKQNHTIPVLAIVEVEVQEVDVGARERVFQEVSSFQGPLDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRINQGQMLV TFADSHSALSVLDVDGMKVKGRAVKIRPKTKDWLKGLREEIIRKRDSMAPVSPTANSCLLEENFDFTSLDYESEGDILEDDEDYLVDEFN QPGVSDSELGGDDLSDVPGPTALAPPSKSPALTKKKQHPTYKDDADLVELKRELEAVGEFRHRSPSRSLSVPNRPRPPQPPQRPPPPTGL MVKKSASDASISSGTHGQYSILQTARLLPGAPQQPPKARTGISKPYNVKQIKTTNAQEAEAAIRCLLEARGGASEEALSAVAPRDLEASS -------------------------------------------------------------- >7605_7605_3_ATG5-SYNJ2_ATG5_chr6_106763976_ENST00000369076_SYNJ2_chr6_158502141_ENST00000367122_length(transcript)=5030nt_BP=432nt CTGGACTTGTGGTGCGCTGCCAGGGCTCCGCAGCGTTGCCGGTTGTATTCGCTGGATACCAGAGGGCGGAAGTGCAGCAGGGTTCAGCTC CGACCTCCGCGCCGGTGCTTTTTGCGGCTGCGCGGGCTTCCTGGAGTCCTGCTACCGCGTCCCCGCAGGACAGTGTGTCAGGCGGGCAGC TTGCCCCGCCGCCCCACCGGAGCGCGGAATCTGGGCGTCCCCACCAGTGCGGGGAGCCGGAAGGAGGAGCCATAGCTTGGAGTAGGTTTG GCTTTGGTTGAAATAAGAATTTAGCCTGTATGTACTGCTTTAACTCCTGGAAGAATGACAGATGACAAAGATGTGCTTCGAGATGTGTGG TTTGGACGAATTCCAACTTGTTTCACGCTATATCAGGATGAGATAACTGAAAGGGAAGCAGAACCATACTATACCTGTGCTGGCGATCGT GGAGGTGGAAGTTCAGGAAGTCGATGTGGGTGCTCGGGAGAGGGTTTTCCAGGAAGTGTCCTCCTTCCAGGGCCCCCTGGATGCCACTGT TGTAGTAAACCTTCAATCACCGACCTTAGAAGAGAAAAACGAGTTTCCAGAGGACCTGCGTACTGAGCTCATGCAGACCTTGGGGAGTTA TGGGACAATTGTTCTTGTCAGGATCAACCAAGGGCAGATGCTGGTAACTTTTGCAGACAGTCACTCGGCTCTCAGTGTCCTGGACGTGGA CGGTATGAAGGTGAAAGGCAGAGCAGTGAAGATTAGACCGAAGACCAAGGACTGGCTGAAAGGTTTGCGAGAGGAGATCATTCGGAAACG AGACAGCATGGCCCCCGTGTCTCCCACTGCCAACTCCTGTTTGCTGGAGGAAAACTTTGACTTCACAAGTTTGGACTATGAGTCAGAAGG GGATATTCTTGAAGACGATGAAGACTACTTGGTGGATGAATTCAATCAGCCTGGAGTCTCGGACAGTGAACTCGGGGGAGACGACCTCTC TGATGTCCCCGGCCCCACAGCACTGGCTCCTCCCAGCAAGTCACCTGCTCTCACCAAAAAGAAGCAGCATCCAACGTACAAAGCCGGTTT AATGGTGAAAAAGTCGGCTTCAGATGCGTCCATCTCCTCCGGCACCCATGGACAGTATTCAATTTTGCAGACGGCAAGACTTCTACCAGG AGCACCTCAGCAACCTCCCAAGGCTCGGACTGGAATAAGTAAACCTTATAATGTCAAGCAGATCAAAACCACCAATGCCCAGGAGGCAGA AGCAGCAATCCGGTGTCTCCTGGAAGCCAGAGGAGGTGCCTCCGAAGAAGCCCTAAGTGCCGTGGCCCCAAGGGACCTTGAAGCATCCTC TGAACCAGAGCCCACACCGGGGGCAGCCAAACCAGAGACCCCACAGGCGCCCCCACTCCTTCCCCGTCGGCCCCCACCCAGAGTTCCTGC CATCAAGAAGCCAACCTTGAGAAGGACAGGAAAGCCCCTGTCACCGGAAGAACAGTTTGAGCAACAGACTGTCCATTTTACAATCGGGCC CCCGGAGACAAGCGTTGAGGCCCCTCCTGTCGTGACAGCCCCTCGAGTCCCTCCTGTTCCCAAACCAAGAACATTTCAGCCTGGGAAAGC TGCAGAGAGGCCAAGCCACAGGAAGCCAGCATCAGACGAAGCCCCTCCTGGGGCAGGAGCCTCTGTGCCACCACCTCTGGAGGCGCCGCC TCTTGTGCCCAAGGTACCCCCGAGGAGGAAGAAGTCAGCCCCCGCAGCCTTCCACCTGCAGGTCCTGCAGAGCAACAGCCAGCTTCTCCA GGGCCTCACTTACAATAGCAGTGACAGCCCCTCTGGGCACCCACCTGCCGCGGGCACCGTCTTCCCACAAGGGGACTTTCTCAGCACTTC ATCTGCTACAAGCCCCGACAGCGATGGCACCAAAGCGATGAAGCCAGAGGCAGCCCCACTTCTTGGTGATTATCAGGACCCCTTCTGGAA CCTTCTTCACCACCCTAAACTGTTGAATAACACTTGGCTTTCTAAGAGCTCAGACCCTTTGGACTCAGGAACCAGGAGCCCCAAAAGAGA TCCCATAGACCCAGTGTCAGCTGGCGCTTCAGCTGCCAAGGCAGAGCTGCCACCAGATCATGAACACAAAACCTTAGGTCACTGGGTGAC AATCAGTGACCAAGAAAAGAGGACAGCACTGCAGGTGTTTGACCCACTGGCAAAAACATGACTGAGCAGCTTTGAAGGCTGCAGTCCTAT AGAATGCATACCTTCCTCCCTCTAGACATCCCTCCACCAGAAGAGACATCTATTTAAAGGCACACTGGCCAAAACGTTTGTGCATCTGTC ACTCTCGTGTAGTTTACAAAAATCGTGTCTCTTATTCAGTAAGATGGTTACTCAGCCACCAAAATATATTTCACTCAAGGCTTGTACATC TGAAGTTTGCTCTTCAAGGAATGGGAACCTTCCTGTTAAATTCGGTGTATGGATTTTAAGAAAGGAATCTAGCCAATGAGGTCCAAGAAG TTCTCACCCATTGAATTTTTAAATGGCTGTTCAGTTCATGTTGTACGTGATGGAGATTTGTCTTTTGTTTTATTTGCATTTTACAGATTT GGTATAACATTTTGGGGAGCCACCTGAAGGTTGATGTATAAAGTAAGGATTAGAGAAAGAGGTCGTTGTGACCATTAGTAGCTGTCCTGG CCCACTTAAACAAGGTTACAAAAAATCAGAGTCGGAAGCAGCCAAATAGGTCAACCTAATGACTAGACTGTACATTCCCATGAGCCTTCA TGTTTAAGTGTGTACATGTGCGTTAACCTTGATGATGCGTGAATCCCGAGGGAGCCGGTGGCATACACCGTTAGCTTAACCTTAGCTTAA ACTAGCTGAAGGCTCCTGTGCCATGTCTTAGACATTGCATGCCCTATCAATTACTATAATCCTGAGCCATGGTGTGCTACTGAAACCAAT TTTTATCCACCATCTAGTCCTTATTAAATGAAACCTCACGGATCCTTTGTTCCGCTTATATTCCATGCATACCACATAAAAGCACACAGT GCGAAAACTCTTGCTGATACGCGATATTGATTCTCATTGTTAGAATATGGAGAGTGTTTCAGCCTCGTCTGTCCGGCTGGAGCTTCGGGA TGGAAAGTGCTATGTGTCCCTGCATATAAGAATCACCAGGCCAGTGTTTCTGGGTTTGCTTGTCTATATGTTTGTCTATATTTTTTGCCT ATACATTTTTCCCACGTTTCCAACAGCACTTCTCACCTATTCAATAACTGAAAAAGACATTACCATAGTGCTTTACATTTTTAAAGTAAT GTTACAAGGTCTGGAATCCATTTGGAGCAGATACCGTGTTTTCGCTATTTAATAAGAAGTTCAGTAGTGAAATCTTACTGTACCGCCTGT TGTATCTGGGAGCCTCGTACAGAGGCTCGCACAGCAGTGATCAAGTGTCATCCCTTACGTGACTGGGGGATGTCTGTCCTAAAAGCTGAC TGCTAGGATAGTAAGGATCATCTTGCCTGGGCTATGCCACTGTCTTGTTACCAATTAGACATCTGGAATTTCATAATTAGTTTTCATTGT CACTGTCAAGATATATTGCAGATTACTTAAATATGGCCATCAAAACAAAAGTTACAACACGTATCTCTTTTCATCTGAAAACTAATACCT GGAAAAGGATAAAAAAAAAAAGGAATCCGTGACCCACAGAGCTAGACAGATAAGATGCATAGTTGACCAGTCATAAAAGGCGGTGTTTAG GTGATCAGGATGCCGTTGGTGGCATTTACGTGCTTTATATGATTTTTACCTCTGTAACAAACACAAGAAATAAACAGAATGGTCCTTAAC AGAGTTTGGGGGAGAGAGCAAGATGGGTTCCTTGGAGAAGCTGATTTGCCAAGATGCACATCGCTATTAACAGCCAGAGTCATAAATGAA ATGAAATTGAAGAATTCATTCAAATGCTCTTTTCCCTATAACCTCTTTTCTCACCAAAAAGGAGATAAATTTGAAAACAGATAAATGTAA CAACCAGTCAAAGAAGCAGGGGAAAAGTAAGCTCCTCCAAAGTTGCTTGCAGTGCTGGAAATAGATCTCATTTTTAGGTTTTCTCTTCGT TCCAGATACCAAATAAATGGGACAGAGAATAAAATTTTTGTTAAAATATGTGCTCATCTCCTAAGTAGCTCTTCAGAGTCTGACCGTAAG TAAAAACACACAGAATTGTGTTGACTGGGGGAGGTGAATCACAAAAAAGTTACGAGGAGTTTAAGAGTTAAATATTATTTGATCGTGGCT GTCAAATTTAGTGAACAACATAGATTGGATTTGGAGTTGGTAGTAGGTATGGTTCTCATACCAGAATTCTCTTAAAAAAAAAAAAAAGGA CAATTGGAATTGCCTTATTTATTTTTAAAATCAATGCTTACTAGTTGGTAGGATTCCCAGGTCAGCAGCAGGGTTGATTAAATAATCTTG ACAATGAGCAGCTGCCATCTTGGGGGATTTCATTCTGTGGTTTTTTAAATGTTTCGTCTTTGATGCTACCATCCAGGGCTTCTTATTGTG ACCTTGTAGCCTATTTTGTTCCTGCTGTTCTCTAACATGGTGCAGTTCACGCAGACTGGTTTAGGTACTTCACAACTCACCATTGTCTCT CTGACCCCAAGCCTAGTCCCTTTTACATCACCATCTTCTCAGACTTCTTGCCTATTCTTAAAATATGTTTTGGTTAATGATTGAATTAGG ACATCAGCTTAAGCAATTCCTGTAACGGTTTAACGTTGTTGAAGTTCAAGGCACATAATAAAATTCTCCCTGATGTGTGTGTAAGTATAA ACAAAGTAATGTATCAAAGCGTTCACTTTATAATGAAGTCATTTCATTGGGAAGGAAAGCTGCAAAGATTATTGGGGGACTAGTGATTAA >7605_7605_3_ATG5-SYNJ2_ATG5_chr6_106763976_ENST00000369076_SYNJ2_chr6_158502141_ENST00000367122_length(amino acids)=604AA_BP=9 MKGKQNHTIPVLAIVEVEVQEVDVGARERVFQEVSSFQGPLDATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRINQGQMLV TFADSHSALSVLDVDGMKVKGRAVKIRPKTKDWLKGLREEIIRKRDSMAPVSPTANSCLLEENFDFTSLDYESEGDILEDDEDYLVDEFN QPGVSDSELGGDDLSDVPGPTALAPPSKSPALTKKKQHPTYKAGLMVKKSASDASISSGTHGQYSILQTARLLPGAPQQPPKARTGISKP YNVKQIKTTNAQEAEAAIRCLLEARGGASEEALSAVAPRDLEASSEPEPTPGAAKPETPQAPPLLPRRPPPRVPAIKKPTLRRTGKPLSP EEQFEQQTVHFTIGPPETSVEAPPVVTAPRVPPVPKPRTFQPGKAAERPSHRKPASDEAPPGAGASVPPPLEAPPLVPKVPPRRKKSAPA AFHLQVLQSNSQLLQGLTYNSSDSPSGHPPAAGTVFPQGDFLSTSSATSPDSDGTKAMKPEAAPLLGDYQDPFWNLLHHPKLLNNTWLSK -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for ATG5-SYNJ2 |
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Hgene | Hgene's interactors | Tgene | Tgene's interactors |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for ATG5-SYNJ2 |
![]() (DrugBank Version 5.1.8 2021-05-08) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for ATG5-SYNJ2 |
![]() (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ATG5 | C0002871 | Anemia | 1 | CTD_human |
Hgene | ATG5 | C0019193 | Hepatitis, Toxic | 1 | CTD_human |
Hgene | ATG5 | C0019209 | Hepatomegaly | 1 | CTD_human |
Hgene | ATG5 | C0023380 | Lethargy | 1 | CTD_human |
Hgene | ATG5 | C0024312 | Lymphopenia | 1 | CTD_human |
Hgene | ATG5 | C0027540 | Necrosis | 1 | CTD_human |
Hgene | ATG5 | C0860207 | Drug-Induced Liver Disease | 1 | CTD_human |
Hgene | ATG5 | C0919267 | ovarian neoplasm | 1 | CTD_human |
Hgene | ATG5 | C1140680 | Malignant neoplasm of ovary | 1 | CTD_human |
Hgene | ATG5 | C1262477 | Weight decreased | 1 | CTD_human |
Hgene | ATG5 | C1262760 | Hepatitis, Drug-Induced | 1 | CTD_human |
Hgene | ATG5 | C3658290 | Drug-Induced Acute Liver Injury | 1 | CTD_human |
Hgene | ATG5 | C4277682 | Chemical and Drug Induced Liver Injury | 1 | CTD_human |
Hgene | ATG5 | C4279912 | Chemically-Induced Liver Toxicity | 1 | CTD_human |
Hgene | ATG5 | C4539808 | SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 25 | 1 | UNIPROT |
Tgene | C0006142 | Malignant neoplasm of breast | 1 | CTD_human | |
Tgene | C0086132 | Depressive Symptoms | 1 | PSYGENET | |
Tgene | C0678222 | Breast Carcinoma | 1 | CTD_human | |
Tgene | C1257931 | Mammary Neoplasms, Human | 1 | CTD_human | |
Tgene | C1458155 | Mammary Neoplasms | 1 | CTD_human | |
Tgene | C4704874 | Mammary Carcinoma, Human | 1 | CTD_human |