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 | Fusion Gene Summary |
| Fusion Gene ORF analysis |
| Fusion Genomic Features |
| Fusion Protein Features |
| Fusion Gene Sequence |
| Fusion Gene PPI analysis |
| Related Drugs |
| Related Diseases |
Fusion gene:PUM1-BAI2 (FusionGDB2 ID:HG9698TG576) |
Fusion Gene Summary for PUM1-BAI2 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: PUM1-BAI2 | Fusion gene ID: hg9698tg576 | Hgene | Tgene | Gene symbol | PUM1 | BAI2 | Gene ID | 9698 | 576 |
| Gene name | pumilio RNA binding family member 1 | adhesion G protein-coupled receptor B2 | |
| Synonyms | HSPUM|PUMH|PUMH1|PUML1|SCA47 | BAI2 | |
| Cytomap | ('PUM1','PUM1')('ADGRB2','BAI2') 1p35.2 | 1p35.2 | |
| Type of gene | protein-coding | protein-coding | |
| Description | pumilio homolog 1pumilio-1 | adhesion G protein-coupled receptor B2brain-specific angiogenesis inhibitor 2 | |
| Modification date | 20200313 | 20200313 | |
| UniProtAcc | . | . | |
| Ensembl transtripts involved in fusion gene | ENST00000257075, ENST00000373741, ENST00000373742, ENST00000373747, ENST00000423018, ENST00000424085, ENST00000426105, ENST00000440538, ENST00000490546, | ||
| Fusion gene scores | * DoF score | 38 X 31 X 15=17670 | 2 X 2 X 2=8 |
| # samples | 56 | 2 | |
| ** MAII score | log2(56/17670*10)=-4.97973140249401 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(2/8*10)=1.32192809488736 | |
| Context | PubMed: PUM1 [Title/Abstract] AND BAI2 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Most frequent breakpoint | PUM1(31532051)-ADGRB2(32222416), # samples:1 PUM1(31532051)-BAI2(32222416), # samples:1 PUM1(31528160)-BAI2(32222416), # samples:1 PUM1(31532146)-BAI2(32210332), # samples:1 | ||
| Anticipated loss of major functional domain due to fusion event. | PUM1-BAI2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. PUM1-BAI2 seems lost the major protein functional domain in Hgene partner, which is a CGC by not retaining the major functional domain in the partially deleted in-frame ORF. PUM1-BAI2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. PUM1-BAI2 seems lost the major protein functional domain in Hgene partner, which is a essential gene by not retaining the major functional domain in the partially deleted in-frame ORF. PUM1-BAI2 seems lost the major protein functional domain in Hgene partner, which is a essential gene due to the frame-shifted ORF. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | PUM1 | GO:0010608 | posttranscriptional regulation of gene expression | 25100735 |
| Hgene | PUM1 | GO:0043488 | regulation of mRNA stability | 26724866 |
| Hgene | PUM1 | GO:0051726 | regulation of cell cycle | 20818387 |
| Hgene | PUM1 | GO:0051983 | regulation of chromosome segregation | 26724866 |
| Hgene | PUM1 | GO:1900246 | positive regulation of RIG-I signaling pathway | 25340845 |
| Hgene | PUM1 | GO:2000637 | positive regulation of gene silencing by miRNA | 20818387|22345517 |
| Tgene | BAI2 | GO:0007186 | G protein-coupled receptor signaling pathway | 28891236 |
| Fusion gene breakpoints across PUM1 (5'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene breakpoints across BAI2 (3'-gene) * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
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| Fusion gene information * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Source | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChimerDB4 | OV | TCGA-61-2012-01A | PUM1 | chr1 | 31532051 | - | ADGRB2 | chr1 | 32222416 | - |
| ChimerDB4 | OV | TCGA-61-2012-01A | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| ChimerDB4 | OV | TCGA-61-2012-01A | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| ChimerDB4 | OV | TCGA-61-2012-01A | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
Top |
Fusion Gene ORF analysis for PUM1-BAI2 |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| 5CDS-5UTR | ENST00000257075 | ENST00000373655 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000257075 | ENST00000373658 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000257075 | ENST00000398542 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000257075 | ENST00000398547 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000373741 | ENST00000373655 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000373741 | ENST00000373658 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000373741 | ENST00000398542 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000373741 | ENST00000398547 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000373742 | ENST00000373655 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000373742 | ENST00000373658 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000373742 | ENST00000398542 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000373742 | ENST00000398547 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000373747 | ENST00000373655 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000373747 | ENST00000373658 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000373747 | ENST00000398542 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000373747 | ENST00000398547 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000423018 | ENST00000373655 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000423018 | ENST00000373658 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000423018 | ENST00000398542 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000423018 | ENST00000398547 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000424085 | ENST00000373655 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000424085 | ENST00000373658 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000424085 | ENST00000398542 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000424085 | ENST00000398547 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000426105 | ENST00000373655 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000426105 | ENST00000373658 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000426105 | ENST00000398542 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000426105 | ENST00000398547 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000440538 | ENST00000373655 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000440538 | ENST00000373658 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000440538 | ENST00000398542 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-5UTR | ENST00000440538 | ENST00000398547 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000257075 | ENST00000257070 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000257075 | ENST00000398538 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000257075 | ENST00000440175 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000257075 | ENST00000465256 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000257075 | ENST00000527361 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000373741 | ENST00000257070 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000373741 | ENST00000398538 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000373741 | ENST00000440175 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000373741 | ENST00000465256 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000373741 | ENST00000527361 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000373742 | ENST00000257070 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000373742 | ENST00000398538 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000373742 | ENST00000440175 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000373742 | ENST00000465256 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000373742 | ENST00000527361 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000373747 | ENST00000257070 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000373747 | ENST00000398538 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000373747 | ENST00000440175 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000373747 | ENST00000465256 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000373747 | ENST00000527361 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000423018 | ENST00000257070 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000423018 | ENST00000398538 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000423018 | ENST00000440175 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000423018 | ENST00000465256 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000423018 | ENST00000527361 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000424085 | ENST00000257070 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000424085 | ENST00000398538 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000424085 | ENST00000440175 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000424085 | ENST00000465256 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000424085 | ENST00000527361 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000426105 | ENST00000257070 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000426105 | ENST00000398538 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000426105 | ENST00000440175 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000426105 | ENST00000465256 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000426105 | ENST00000527361 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000440538 | ENST00000257070 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000440538 | ENST00000398538 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000440538 | ENST00000440175 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000440538 | ENST00000465256 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| 5CDS-intron | ENST00000440538 | ENST00000527361 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| Frame-shift | ENST00000257075 | ENST00000398556 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| Frame-shift | ENST00000373747 | ENST00000398556 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| Frame-shift | ENST00000423018 | ENST00000398556 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| Frame-shift | ENST00000424085 | ENST00000398556 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| Frame-shift | ENST00000426105 | ENST00000398556 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| Frame-shift | ENST00000440538 | ENST00000398556 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| In-frame | ENST00000373741 | ENST00000398556 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| In-frame | ENST00000373742 | ENST00000398556 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| intron-3CDS | ENST00000257075 | ENST00000373655 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000257075 | ENST00000373658 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000257075 | ENST00000398542 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000257075 | ENST00000398547 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000257075 | ENST00000398556 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-3CDS | ENST00000257075 | ENST00000398556 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000373741 | ENST00000373655 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000373741 | ENST00000373658 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000373741 | ENST00000398542 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000373741 | ENST00000398547 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000373741 | ENST00000398556 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-3CDS | ENST00000373741 | ENST00000398556 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000373742 | ENST00000373655 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000373742 | ENST00000373658 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000373742 | ENST00000398542 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000373742 | ENST00000398547 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000373742 | ENST00000398556 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-3CDS | ENST00000373742 | ENST00000398556 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000373747 | ENST00000373655 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000373747 | ENST00000373658 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000373747 | ENST00000398542 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000373747 | ENST00000398547 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000373747 | ENST00000398556 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-3CDS | ENST00000373747 | ENST00000398556 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000423018 | ENST00000373655 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000423018 | ENST00000373658 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000423018 | ENST00000398542 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000423018 | ENST00000398547 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000423018 | ENST00000398556 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-3CDS | ENST00000423018 | ENST00000398556 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000424085 | ENST00000373655 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000424085 | ENST00000373658 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000424085 | ENST00000398542 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000424085 | ENST00000398547 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000424085 | ENST00000398556 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-3CDS | ENST00000424085 | ENST00000398556 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000426105 | ENST00000373655 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000426105 | ENST00000373658 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000426105 | ENST00000398542 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000426105 | ENST00000398547 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000426105 | ENST00000398556 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-3CDS | ENST00000426105 | ENST00000398556 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000440538 | ENST00000373655 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000440538 | ENST00000373658 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000440538 | ENST00000398542 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000440538 | ENST00000398547 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000440538 | ENST00000398556 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-3CDS | ENST00000440538 | ENST00000398556 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000490546 | ENST00000373655 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000490546 | ENST00000373658 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000490546 | ENST00000398542 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000490546 | ENST00000398547 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-3CDS | ENST00000490546 | ENST00000398556 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-3CDS | ENST00000490546 | ENST00000398556 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| intron-3CDS | ENST00000490546 | ENST00000398556 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-5UTR | ENST00000257075 | ENST00000373655 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000257075 | ENST00000373658 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000257075 | ENST00000398542 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000257075 | ENST00000398547 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000373741 | ENST00000373655 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000373741 | ENST00000373658 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000373741 | ENST00000398542 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000373741 | ENST00000398547 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000373742 | ENST00000373655 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000373742 | ENST00000373658 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000373742 | ENST00000398542 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000373742 | ENST00000398547 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000373747 | ENST00000373655 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000373747 | ENST00000373658 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000373747 | ENST00000398542 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000373747 | ENST00000398547 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000423018 | ENST00000373655 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000423018 | ENST00000373658 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000423018 | ENST00000398542 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000423018 | ENST00000398547 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000424085 | ENST00000373655 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000424085 | ENST00000373658 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000424085 | ENST00000398542 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000424085 | ENST00000398547 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000426105 | ENST00000373655 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000426105 | ENST00000373658 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000426105 | ENST00000398542 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000426105 | ENST00000398547 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000440538 | ENST00000373655 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000440538 | ENST00000373658 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000440538 | ENST00000398542 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000440538 | ENST00000398547 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000490546 | ENST00000373655 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000490546 | ENST00000373655 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000490546 | ENST00000373658 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000490546 | ENST00000373658 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000490546 | ENST00000398542 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000490546 | ENST00000398542 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000490546 | ENST00000398547 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-5UTR | ENST00000490546 | ENST00000398547 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000257075 | ENST00000257070 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000257075 | ENST00000257070 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000257075 | ENST00000398538 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000257075 | ENST00000398538 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000257075 | ENST00000440175 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000257075 | ENST00000440175 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000257075 | ENST00000465256 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000257075 | ENST00000465256 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000257075 | ENST00000527361 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000257075 | ENST00000527361 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000373741 | ENST00000257070 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000373741 | ENST00000257070 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000373741 | ENST00000398538 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000373741 | ENST00000398538 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000373741 | ENST00000440175 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000373741 | ENST00000440175 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000373741 | ENST00000465256 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000373741 | ENST00000465256 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000373741 | ENST00000527361 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000373741 | ENST00000527361 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000373742 | ENST00000257070 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000373742 | ENST00000257070 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000373742 | ENST00000398538 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000373742 | ENST00000398538 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000373742 | ENST00000440175 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000373742 | ENST00000440175 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000373742 | ENST00000465256 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000373742 | ENST00000465256 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000373742 | ENST00000527361 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000373742 | ENST00000527361 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000373747 | ENST00000257070 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000373747 | ENST00000257070 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000373747 | ENST00000398538 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000373747 | ENST00000398538 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000373747 | ENST00000440175 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000373747 | ENST00000440175 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000373747 | ENST00000465256 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000373747 | ENST00000465256 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000373747 | ENST00000527361 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000373747 | ENST00000527361 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000423018 | ENST00000257070 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000423018 | ENST00000257070 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000423018 | ENST00000398538 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000423018 | ENST00000398538 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000423018 | ENST00000440175 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000423018 | ENST00000440175 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000423018 | ENST00000465256 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000423018 | ENST00000465256 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000423018 | ENST00000527361 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000423018 | ENST00000527361 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000424085 | ENST00000257070 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000424085 | ENST00000257070 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000424085 | ENST00000398538 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000424085 | ENST00000398538 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000424085 | ENST00000440175 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000424085 | ENST00000440175 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000424085 | ENST00000465256 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000424085 | ENST00000465256 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000424085 | ENST00000527361 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000424085 | ENST00000527361 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000426105 | ENST00000257070 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000426105 | ENST00000257070 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000426105 | ENST00000398538 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000426105 | ENST00000398538 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000426105 | ENST00000440175 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000426105 | ENST00000440175 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000426105 | ENST00000465256 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000426105 | ENST00000465256 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000426105 | ENST00000527361 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000426105 | ENST00000527361 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000440538 | ENST00000257070 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000440538 | ENST00000257070 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000440538 | ENST00000398538 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000440538 | ENST00000398538 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000440538 | ENST00000440175 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000440538 | ENST00000440175 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000440538 | ENST00000465256 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000440538 | ENST00000465256 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000440538 | ENST00000527361 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000440538 | ENST00000527361 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000490546 | ENST00000257070 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000490546 | ENST00000257070 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000490546 | ENST00000257070 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000490546 | ENST00000398538 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000490546 | ENST00000398538 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000490546 | ENST00000398538 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000490546 | ENST00000440175 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000490546 | ENST00000440175 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000490546 | ENST00000440175 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000490546 | ENST00000465256 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000490546 | ENST00000465256 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000490546 | ENST00000465256 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| intron-intron | ENST00000490546 | ENST00000527361 | PUM1 | chr1 | 31528160 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000490546 | ENST00000527361 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - |
| intron-intron | ENST00000490546 | ENST00000527361 | PUM1 | chr1 | 31532146 | - | BAI2 | chr1 | 32210332 | - |
| ORFfinder result based on the fusion transcript sequence of in-frame fusion genes. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | Seq length (transcript) | BP loci (transcript) | Predicted start (transcript) | Predicted stop (transcript) | Seq length (amino acids) |
| ENST00000373741 | PUM1 | chr1 | 31532051 | - | ENST00000398556 | BAI2 | chr1 | 32222416 | - | 5453 | 677 | 113 | 5149 | 1678 |
| ENST00000373742 | PUM1 | chr1 | 31532051 | - | ENST00000398556 | BAI2 | chr1 | 32222416 | - | 5247 | 471 | 0 | 4943 | 1647 |
| DeepORF prediction of the coding potential based on the fusion transcript sequence of in-frame fusion genes. DeepORF is a coding potential classifier based on convolutional neural network by comparing the real Ribo-seq data. If the no-coding score < 0.5 and coding score > 0.5, then the in-frame fusion transcript is predicted as being likely translated. |
| Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | No-coding score | Coding score |
| ENST00000373741 | ENST00000398556 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - | 0.005824826 | 0.99417526 |
| ENST00000373742 | ENST00000398556 | PUM1 | chr1 | 31532051 | - | BAI2 | chr1 | 32222416 | - | 0.004913752 | 0.99508625 |
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Fusion Genomic Features for PUM1-BAI2 |
| FusionAI prediction of the potential fusion gene breakpoint based on the pre-mature RNA sequence context (+/- 5kb of individual partner genes, total 20kb length sequence). FusionAI is a fusion gene breakpoint classifier based on convolutional neural network by comparing the fusion positive and negative sequence context of ~ 20K fusion gene data. From here, we can have the relative potentency of the 20K genomic sequence how individual sequnce will be likely used as the gene fusion breakpoints. |
| Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand | 1-p | p (fusion gene breakpoint) |
| Distribution of 44 human genomic features loci across 20kb length fusion breakpoint regions. We integrated a total of 44 different types of human genomic feature loci information across five big categories including virus integration sites, repeats, structural variants, chromatin states, and gene expression regulation. More details are in help page. |
 |
Top |
Fusion Protein Features for PUM1-BAI2 |
| Four levels of functional features of fusion genes Go to FGviewer search page for the most frequent breakpoint (https://ccsmweb.uth.edu/FGviewer/chr1:31532051/chr1:32222416) - FGviewer provides the online visualization of the retention search of the protein functional features across DNA, RNA, protein, and pathological levels. - How to search 1. Put your fusion gene symbol. 2. Press the tab key until there will be shown the breakpoint information filled. 4. Go down and press 'Search' tab twice. 4. Go down to have the hyperlink of the search result. 5. Click the hyperlink. 6. See the FGviewer result for your fusion gene. |
 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| . | . |
| FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. | FUNCTION: Transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons. Recruits CREB-binding protein (CREBBP) to nuclear bodies. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-FOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC1 repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP (By similarity). {ECO:0000250}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 129_134 | 7 | 1552.0 | Compositional bias | Note=Poly-Glu | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 1315_1318 | 7 | 1552.0 | Compositional bias | Note=Poly-Pro | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 1364_1370 | 7 | 1552.0 | Compositional bias | Note=Poly-Gly | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 1425_1430 | 7 | 1552.0 | Compositional bias | Note=Poly-Pro | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 189_192 | 7 | 1552.0 | Compositional bias | Note=Poly-Asn | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 234_237 | 7 | 1552.0 | Compositional bias | Note=Poly-Thr | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 129_134 | 7 | 1585.0 | Compositional bias | Note=Poly-Glu | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 1315_1318 | 7 | 1585.0 | Compositional bias | Note=Poly-Pro | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 1364_1370 | 7 | 1585.0 | Compositional bias | Note=Poly-Gly | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 1425_1430 | 7 | 1585.0 | Compositional bias | Note=Poly-Pro | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 189_192 | 7 | 1585.0 | Compositional bias | Note=Poly-Asn | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 234_237 | 7 | 1585.0 | Compositional bias | Note=Poly-Thr | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 129_134 | 7 | 1586.0 | Compositional bias | Note=Poly-Glu | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 1315_1318 | 7 | 1586.0 | Compositional bias | Note=Poly-Pro | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 1364_1370 | 7 | 1586.0 | Compositional bias | Note=Poly-Gly | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 1425_1430 | 7 | 1586.0 | Compositional bias | Note=Poly-Pro | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 189_192 | 7 | 1586.0 | Compositional bias | Note=Poly-Asn | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 234_237 | 7 | 1586.0 | Compositional bias | Note=Poly-Thr | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 129_134 | 7 | 1552.0 | Compositional bias | Note=Poly-Glu | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 1315_1318 | 7 | 1552.0 | Compositional bias | Note=Poly-Pro | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 1364_1370 | 7 | 1552.0 | Compositional bias | Note=Poly-Gly | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 1425_1430 | 7 | 1552.0 | Compositional bias | Note=Poly-Pro | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 189_192 | 7 | 1552.0 | Compositional bias | Note=Poly-Asn | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 234_237 | 7 | 1552.0 | Compositional bias | Note=Poly-Thr | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 309_362 | 7 | 1552.0 | Domain | TSP type-1 1 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 364_417 | 7 | 1552.0 | Domain | TSP type-1 2 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 419_472 | 7 | 1552.0 | Domain | TSP type-1 3 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 475_528 | 7 | 1552.0 | Domain | TSP type-1 4 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 871_923 | 7 | 1552.0 | Domain | GPS | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 309_362 | 7 | 1585.0 | Domain | TSP type-1 1 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 364_417 | 7 | 1585.0 | Domain | TSP type-1 2 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 419_472 | 7 | 1585.0 | Domain | TSP type-1 3 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 475_528 | 7 | 1585.0 | Domain | TSP type-1 4 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 871_923 | 7 | 1585.0 | Domain | GPS | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 309_362 | 7 | 1586.0 | Domain | TSP type-1 1 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 364_417 | 7 | 1586.0 | Domain | TSP type-1 2 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 419_472 | 7 | 1586.0 | Domain | TSP type-1 3 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 475_528 | 7 | 1586.0 | Domain | TSP type-1 4 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 871_923 | 7 | 1586.0 | Domain | GPS | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 309_362 | 7 | 1552.0 | Domain | TSP type-1 1 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 364_417 | 7 | 1552.0 | Domain | TSP type-1 2 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 419_472 | 7 | 1552.0 | Domain | TSP type-1 3 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 475_528 | 7 | 1552.0 | Domain | TSP type-1 4 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 871_923 | 7 | 1552.0 | Domain | GPS | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 1016_1036 | 7 | 1552.0 | Topological domain | Cytoplasmic | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 1058_1078 | 7 | 1552.0 | Topological domain | Extracellular | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 1100_1121 | 7 | 1552.0 | Topological domain | Cytoplasmic | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 1143_1153 | 7 | 1552.0 | Topological domain | Extracellular | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 1175_1585 | 7 | 1552.0 | Topological domain | Cytoplasmic | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 33_936 | 7 | 1552.0 | Topological domain | Extracellular | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 958_965 | 7 | 1552.0 | Topological domain | Cytoplasmic | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 987_994 | 7 | 1552.0 | Topological domain | Extracellular | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 1016_1036 | 7 | 1585.0 | Topological domain | Cytoplasmic | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 1058_1078 | 7 | 1585.0 | Topological domain | Extracellular | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 1100_1121 | 7 | 1585.0 | Topological domain | Cytoplasmic | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 1143_1153 | 7 | 1585.0 | Topological domain | Extracellular | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 1175_1585 | 7 | 1585.0 | Topological domain | Cytoplasmic | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 33_936 | 7 | 1585.0 | Topological domain | Extracellular | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 958_965 | 7 | 1585.0 | Topological domain | Cytoplasmic | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 987_994 | 7 | 1585.0 | Topological domain | Extracellular | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 1016_1036 | 7 | 1586.0 | Topological domain | Cytoplasmic | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 1058_1078 | 7 | 1586.0 | Topological domain | Extracellular | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 1100_1121 | 7 | 1586.0 | Topological domain | Cytoplasmic | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 1143_1153 | 7 | 1586.0 | Topological domain | Extracellular | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 1175_1585 | 7 | 1586.0 | Topological domain | Cytoplasmic | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 33_936 | 7 | 1586.0 | Topological domain | Extracellular | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 958_965 | 7 | 1586.0 | Topological domain | Cytoplasmic | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 987_994 | 7 | 1586.0 | Topological domain | Extracellular | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 1016_1036 | 7 | 1552.0 | Topological domain | Cytoplasmic | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 1058_1078 | 7 | 1552.0 | Topological domain | Extracellular | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 1100_1121 | 7 | 1552.0 | Topological domain | Cytoplasmic | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 1143_1153 | 7 | 1552.0 | Topological domain | Extracellular | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 1175_1585 | 7 | 1552.0 | Topological domain | Cytoplasmic | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 33_936 | 7 | 1552.0 | Topological domain | Extracellular | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 958_965 | 7 | 1552.0 | Topological domain | Cytoplasmic | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 987_994 | 7 | 1552.0 | Topological domain | Extracellular | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 1037_1057 | 7 | 1552.0 | Transmembrane | Helical%3B Name%3D4 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 1079_1099 | 7 | 1552.0 | Transmembrane | Helical%3B Name%3D5 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 1122_1142 | 7 | 1552.0 | Transmembrane | Helical%3B Name%3D6 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 1154_1174 | 7 | 1552.0 | Transmembrane | Helical%3B Name%3D7 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 937_957 | 7 | 1552.0 | Transmembrane | Helical%3B Name%3D1 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 966_986 | 7 | 1552.0 | Transmembrane | Helical%3B Name%3D2 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000257070 | 2 | 32 | 995_1015 | 7 | 1552.0 | Transmembrane | Helical%3B Name%3D3 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 1037_1057 | 7 | 1585.0 | Transmembrane | Helical%3B Name%3D4 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 1079_1099 | 7 | 1585.0 | Transmembrane | Helical%3B Name%3D5 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 1122_1142 | 7 | 1585.0 | Transmembrane | Helical%3B Name%3D6 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 1154_1174 | 7 | 1585.0 | Transmembrane | Helical%3B Name%3D7 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 937_957 | 7 | 1585.0 | Transmembrane | Helical%3B Name%3D1 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 966_986 | 7 | 1585.0 | Transmembrane | Helical%3B Name%3D2 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373655 | 2 | 33 | 995_1015 | 7 | 1585.0 | Transmembrane | Helical%3B Name%3D3 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 1037_1057 | 7 | 1586.0 | Transmembrane | Helical%3B Name%3D4 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 1079_1099 | 7 | 1586.0 | Transmembrane | Helical%3B Name%3D5 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 1122_1142 | 7 | 1586.0 | Transmembrane | Helical%3B Name%3D6 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 1154_1174 | 7 | 1586.0 | Transmembrane | Helical%3B Name%3D7 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 937_957 | 7 | 1586.0 | Transmembrane | Helical%3B Name%3D1 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 966_986 | 7 | 1586.0 | Transmembrane | Helical%3B Name%3D2 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000373658 | 2 | 33 | 995_1015 | 7 | 1586.0 | Transmembrane | Helical%3B Name%3D3 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 1037_1057 | 7 | 1552.0 | Transmembrane | Helical%3B Name%3D4 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 1079_1099 | 7 | 1552.0 | Transmembrane | Helical%3B Name%3D5 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 1122_1142 | 7 | 1552.0 | Transmembrane | Helical%3B Name%3D6 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 1154_1174 | 7 | 1552.0 | Transmembrane | Helical%3B Name%3D7 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 937_957 | 7 | 1552.0 | Transmembrane | Helical%3B Name%3D1 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 966_986 | 7 | 1552.0 | Transmembrane | Helical%3B Name%3D2 | |
| Tgene | BAI2 | chr1:31532051 | chr1:32222416 | ENST00000527361 | 0 | 30 | 995_1015 | 7 | 1552.0 | Transmembrane | Helical%3B Name%3D3 |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000257075 | - | 2 | 22 | 393_613 | 121 | 1187.0 | Compositional bias | Note=Ala-rich |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000257075 | - | 2 | 22 | 475_523 | 121 | 1187.0 | Compositional bias | Note=Gln-rich |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000257075 | - | 2 | 22 | 642_815 | 121 | 1187.0 | Compositional bias | Note=Ser-rich |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000426105 | - | 2 | 22 | 393_613 | 121 | 1189.0 | Compositional bias | Note=Ala-rich |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000426105 | - | 2 | 22 | 475_523 | 121 | 1189.0 | Compositional bias | Note=Gln-rich |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000426105 | - | 2 | 22 | 642_815 | 121 | 1189.0 | Compositional bias | Note=Ser-rich |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000440538 | - | 2 | 22 | 393_613 | 121 | 1163.0 | Compositional bias | Note=Ala-rich |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000440538 | - | 2 | 22 | 475_523 | 121 | 1163.0 | Compositional bias | Note=Gln-rich |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000440538 | - | 2 | 22 | 642_815 | 121 | 1163.0 | Compositional bias | Note=Ser-rich |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000257075 | - | 2 | 22 | 828_1168 | 121 | 1187.0 | Domain | PUM-HD |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000426105 | - | 2 | 22 | 828_1168 | 121 | 1189.0 | Domain | PUM-HD |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000440538 | - | 2 | 22 | 828_1168 | 121 | 1163.0 | Domain | PUM-HD |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000257075 | - | 2 | 22 | 1028_1063 | 121 | 1187.0 | Repeat | Pumilio 6 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000257075 | - | 2 | 22 | 1064_1099 | 121 | 1187.0 | Repeat | Pumilio 7 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000257075 | - | 2 | 22 | 1103_1142 | 121 | 1187.0 | Repeat | Pumilio 8 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000257075 | - | 2 | 22 | 848_883 | 121 | 1187.0 | Repeat | Pumilio 1 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000257075 | - | 2 | 22 | 884_919 | 121 | 1187.0 | Repeat | Pumilio 2 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000257075 | - | 2 | 22 | 920_955 | 121 | 1187.0 | Repeat | Pumilio 3 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000257075 | - | 2 | 22 | 956_991 | 121 | 1187.0 | Repeat | Pumilio 4 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000257075 | - | 2 | 22 | 992_1027 | 121 | 1187.0 | Repeat | Pumilio 5 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000426105 | - | 2 | 22 | 1028_1063 | 121 | 1189.0 | Repeat | Pumilio 6 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000426105 | - | 2 | 22 | 1064_1099 | 121 | 1189.0 | Repeat | Pumilio 7 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000426105 | - | 2 | 22 | 1103_1142 | 121 | 1189.0 | Repeat | Pumilio 8 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000426105 | - | 2 | 22 | 848_883 | 121 | 1189.0 | Repeat | Pumilio 1 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000426105 | - | 2 | 22 | 884_919 | 121 | 1189.0 | Repeat | Pumilio 2 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000426105 | - | 2 | 22 | 920_955 | 121 | 1189.0 | Repeat | Pumilio 3 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000426105 | - | 2 | 22 | 956_991 | 121 | 1189.0 | Repeat | Pumilio 4 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000426105 | - | 2 | 22 | 992_1027 | 121 | 1189.0 | Repeat | Pumilio 5 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000440538 | - | 2 | 22 | 1028_1063 | 121 | 1163.0 | Repeat | Pumilio 6 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000440538 | - | 2 | 22 | 1064_1099 | 121 | 1163.0 | Repeat | Pumilio 7 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000440538 | - | 2 | 22 | 1103_1142 | 121 | 1163.0 | Repeat | Pumilio 8 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000440538 | - | 2 | 22 | 848_883 | 121 | 1163.0 | Repeat | Pumilio 1 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000440538 | - | 2 | 22 | 884_919 | 121 | 1163.0 | Repeat | Pumilio 2 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000440538 | - | 2 | 22 | 920_955 | 121 | 1163.0 | Repeat | Pumilio 3 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000440538 | - | 2 | 22 | 956_991 | 121 | 1163.0 | Repeat | Pumilio 4 |
| Hgene | PUM1 | chr1:31532051 | chr1:32222416 | ENST00000440538 | - | 2 | 22 | 992_1027 | 121 | 1163.0 | Repeat | Pumilio 5 |
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Fusion Gene Sequence for PUM1-BAI2 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. To have fusion amino acid sequence, we ran ORFfinder and chose the longest ORF among the all predicted ones. |
| >70657_70657_1_PUM1-BAI2_PUM1_chr1_31532051_ENST00000373741_BAI2_chr1_32222416_ENST00000398556_length(transcript)=5453nt_BP=677nt AACCCCGCGTGCCCAGCTCCAGGCCGTGTTCTCCCAGGTGCGGGCCGGCGGGACCCCGCCTTCGGCCCTGGCGGCGCGCGCTCGCCTAGC GGGCGGGCACTCGCGCGCAGCGTTTGTGTTGCCTGCGAGTTTCCCGAGTTCACACAGGCCCTGGGTTGGCATGGCAACCAGGCAACCTGT TCCAGAGCCGCCAGCCTTCTCCGCACATGCCGCTGCCACCGCCGGGGCCGGGGCCGGAGCCTATCCCAGGATGCACCGCGCCAACCCAGT CCCCAGTGGGCCGCCATGTTGTCGGAGTGAAAGGTGTTGGTGGAATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGG ACTCTTTCAGCCCCCACCTGAAACATCACCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAG CGCAGCCACAACCAGCTGCAAATCAGGCTCTTGCAGCTGGGACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCC AGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATA GCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACATCAGGGCAAGGGACATAGGATGACCCCAGCCTGTCCCCTCTTACTGT CTGTGATTCTGTCCCTGCGCCTGGCCACCGCCTTCGACCCCGCCCCCAGTGCCTGCTCTGCCCTGGCCTCGGGTGTGCTCTACGGGGCCT TCTCGCTGCAGGACCTCTTTCCTACCATCGCCTCGGGCTGCTCCTGGACCCTGGAGAACCCTGACCCCACCAAGTACTCCCTCTACCTGC GCTTCAACCGCCAGGAGCAGGTGTGCGCACACTTTGCCCCCCGCCTGCTGCCCCTGGACCACTACCTGGTCAACTTTACCTGCCTGCGGC CTAGCCCCGAGGAGGCGGTGGCCCAGGCGGAGTCAGAGGTGGGGCGGCCAGAAGAGGAGGAGGCAGAGGCGGCAGCGGGGTTGGAGCTGT GCAGCGGCTCAGGCCCCTTTACCTTCCTGCACTTCGACAAGAACTTCGTGCAGCTGTGCCTGTCGGCTGAGCCCTCCGAGGCCCCGCGCC TGCTGGCGCCCGCTGCCCTAGCCTTCCGCTTTGTCGAGGTCTTGCTCATCAACAACAACAACTCTAGCCAATTCACCTGTGGTGTGCTCT GCCGCTGGAGTGAGGAGTGTGGCCGCGCTGCCGGCAGGGCCTGCGGCTTTGCTCAGCCAGGCTGCAGCTGCCCTGGAGAGGCGGGGGCCG GCTCCACCACCACCACATCTCCAGGCCCTCCTGCTGCCCACACCCTGTCCAATGCCCTGGTGCCCGGGGGCCCAGCCCCACCTGCTGAGG CCGATTTGCACTCGGGGAGCAGCAATGATCTGTTCACAACCGAGATGAGATATGGTGAGGAGCCGGAAGAGGAACCGAAAGTGAAAACCC AGTGGCCGAGGTCTGCAGATGAGCCTGGGCTATACATGGCGCAGACAGTGCACGGCGTGTGGGAGGAGTGGGGGTCCTGGAGCCTGTGCT CCCGCAGCTGCGGGCGGGGGTCCCGGAGCCGGATGCGGACCTGCGTGCCCCCCCAGCACGGCGGCAAGGCCTGCGAGGGTCCTGAGCTGC AGACTAAGCTCTGCAGTATGGCTGCCTGCCCGGTGGAAGGCCAGTGGTTAGAATGGGGTCCCTGGGGCCCATGCTCCACGTCCTGTGCCA ATGGGACCCAACAGCGCAGCCGGAAGTGCAGCGTGGCGGGCCCAGCCTGGGCCACATGCACGGGTGCCCTCACTGACACCCGGGAGTGCA GCAACCTCGAGTGCCCGGCCACTGATAGCAAGTGGGGGCCATGGAATGCGTGGAGCCTGTGCTCTAAGACGTGTGACACAGGCTGGCAGC GCCGCTTCCGCATGTGCCAGGCCACGGGCACGCAGGGCTACCCCTGCGAGGGCACCGGAGAGGAGGTGAAGCCTTGTAGTGAGAAGAGGT GTCCAGCCTTCCATGAGATGTGCAGGGATGAGTACGTGATGCTGATGACGTGGAAGAAGGCAGCTGCTGGCGAGATCATCTACAACAAGT GCCCCCCGAATGCCTCAGGGTCTGCCAGCCGCCGCTGTCTCCTCAGTGCCCAAGGCGTGGCGTACTGGGGGCTGCCCAGCTTTGCTCGCT GCATCTCCCATGAGTACCGCTACCTGTATCTGTCACTTAGGGAGCACCTGGCCAAGGGGCAGCGCATGCTGGCAGGCGAGGGCATGTCGC AGGTGGTGCGCAGCCTGCAGGAGCTACTGGCCCGGCGCACCTACTATAGTGGGGACCTGCTCTTCTCTGTGGACATTCTGAGGAATGTCA CTGACACCTTTAAGAGGGCCACCTACGTGCCCTCGGCTGATGATGTGCAGCGCTTCTTCCAGGTGGTGAGCTTCATGGTGGATGCGGAAA ACAAGGAGAAGTGGGACGATGCTCAGCAGGTGTCCCCTGGCTCTGTGCACCTGCTCCGTGTCGTGGAGGACTTCATTCACCTGGTGGGCG ATGCTCTCAAGGCCTTCCAGAGCTCTCTGATTGTCACAGATAATCTAGTGATCAGCATTCAGCGAGAGCCCGTCTCAGCTGTGTCCAGTG ACATCACGTTCCCCATGCGGGGCCGCCGGGGCATGAAGGACTGGGTGCGGCACTCAGAGGACCGCCTCTTCCTGCCCAAGGAGGTGCTCA GCCTCTCCTCCCCAGGGAAGCCAGCCACATCTGGGGCAGCAGGCAGCCCTGGCAGGGGGAGGGGCCCAGGAACGGTGCCTCCTGGCCCAG GCCACTCCCACCAGCGCCTCCTCCCAGCAGACCCTGATGAGTCCTCCTACTTTGTGATCGGTGCTGTACTCTACCGCACCCTTGGCCTCA TCCTGCCGCCTCCCAGGCCCCCGCTGGCCGTCACATCCCGGGTGATGACAGTGACTGTGCGCCCCCCTACCCAGCCTCCAGCTGAGCCCC TCATCACTGTGGAGCTCTCCTACATCATCAATGGGACCACGGATCCCCATTGCGCCAGCTGGGACTACTCCAGAGCAGATGCCAGCTCAG GAGACTGGGACACTGAAAATTGCCAGACCCTGGAGACCCAGGCAGCTCACACCCGCTGCCAGTGCCAGCACCTGTCCACCTTTGCTGTAC TAGCCCAGCCGCCCAAGGACCTGACCCTGGAGCTGGCGGGCTCCCCCTCGGTCCCCCTGGTGATCGGCTGTGCAGTGTCGTGCATGGCGC TGCTCACCCTGCTCGCCATCTATGCCGCCTTTTGGAGGTTCATAAAATCTGAACGCTCCATCATCTTGCTGAACTTCTGCCTGTCCATCT TGGCATCCAACATCCTGATCCTCGTGGGCCAGTCCCGGGTGCTGAGCAAGGGCGTGTGCACCATGACGGCTGCCTTCCTGCACTTCTTCT TTCTCTCCTCCTTTTGCTGGGTGCTTACCGAGGCCTGGCAGTCCTACCTGGCTGTCATTGGGCGGATGCGCACCCGCCTCGTTCGCAAGC GCTTCCTCTGCCTGGGCTGGGGTCTGCCTGCCCTGGTGGTGGCCGTGTCTGTTGGCTTTACCCGAACGAAAGGATACGGTACATCCAGCT ACTGCTGGCTCTCCCTGGAGGGCGGCCTGCTCTACGCCTTTGTGGGCCCTGCAGCCGTCATTGTCCTGGTGAACATGCTCATCGGAATCA TCGTCTTCAACAAGCTCATGGCACGTGATGGCATCTCCGACAAATCCAAGAAGCAGAGGGCCGGGGCCTCACTCTGGAGCTCCTGCGTGG TGCTGCCCCTGCTGGCGCTCACCTGGATGTCTGCCGTCCTGGCTATGACAGACCGCCGTTCCGTCCTCTTCCAGGCCCTCTTTGCTGTCT TCAACTCCGCGCAGGGCTTTGTCATCACTGCTGTGCACTGCTTCCTGCGCCGAGAGGTCCAGGATGTGGTGAAGTGCCAGATGGGGGTGT GCCGGGCTGATGAGAGCGAAGACTCCCCTGACTCGTGTAAGAACGGGCAGCTGCAGATCCTGTCAGACTTTGAAAAGGATGTGGATCTGG CTTGTCAAACAGTGCTGTTCAAGGAGGTCAACACTTGCAACCCGTCCACCATCACGGGCACACTATCCCGCCTGTCCCTGGATGAGGATG AGGAGCCCAAGTCCTGCCTCGTGGGCCCTGAGGGCAGCCTCAGCTTCTCACCACTGCCTGGGAATATCCTGGTGCCCATGGCAGCCTCAC CAGGGCTGGGGGAGCCTCCGCCCCCACAGGAGGCCAACCCTGTTTACATGTGTGGGGAGGGTGGCCTGCGGCAGCTGGACCTCACATGGC TGCGGCCCACTGAGCCAGGCTCTGAGGGAGACTACATGGTGCTGCCCCGGCGGACTTTGAGCCTGCAGCCTGGCGGTGGGGGTGGAGGTG GTGAGGATGCCCCCAGGGCCCGGCCGGAGGGGACCCCCCGGCGAGCTGCCAAGACAGTGGCCCACACTGAAGGCTACCCCAGCTTCCTGT CCGTGGACCACTCGGGCCTGGGGCTGGGCCCTGCCTATGGATCTCTCCAGAATCCCTATGGAATGACCTTCCAACCGCCACCGCCGACAC CCAGCGCCCGCCAAGTGCCCGAGCCAGGGGAGCGCAGCCGGACCATGCCTCGCACCGTGCCCGGCTCTACCATGAAGATGGGCTCCCTGG AGCGAAAGAAATTACGGTATTCAGACCTGGACTTTGAGAAGGTGATGCACACCCGGAAACGGCATTCAGAACTCTACCACGAGCTCAACC AGAAGTTCCACACTTTCGACCGCTACCGCAGCCAGTCCACGGCCAAGAGGGAGAAGCGGTGGAGTGTGTCCTCGGGTGGGGCAGCCGAGC GGAGCGTGTGCACCGATAAGCCCAGCCCTGGGGAGCGCCCCAGCTTGTCCCAACATCGGCGCCATCAGAGCTGGAGCACCTTCAAATCTA TGACACTGGGCTCGCTGCCCCCCAAGCCCCGAGAACGGCTGACTCTGCACCGGGCAGCAGCCTGGGAGCCCACAGAACCACCGGATGGTG ACTTCCAGACAGAGGTGTGAGTGCCACGCTGGACTGCCCACTGCATATAAATATATATATCTCTCTATTTTCACACTCCACTTTGGAACT ACCCAGGAGCCAGCGCCCTCTCCCCTCTCCCGAGGGCTGGGCAGGGAGGCGCCGTGGACTCAGCCAGGCTGGGGGAGCCGGACATGGCTT GGCCTGGGGTCCCAGGGCCCTTCCTTGTTTCTCAGAGGCCCCTCAGCCACTGGAACCCCATCTTCAGCCCAGCCTGTCCGTCCCTGTCCC >70657_70657_1_PUM1-BAI2_PUM1_chr1_31532051_ENST00000373741_BAI2_chr1_32222416_ENST00000398556_length(amino acids)=1678AA_BP=34 MCCLRVSRVHTGPGLAWQPGNLFQSRQPSPHMPLPPPGPGPEPIPGCTAPTQSPVGRHVVGVKGVGGMSVACVLKRKAVLWQDSFSPHLK HHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTG DNIHAEHQGKGHRMTPACPLLLSVILSLRLATAFDPAPSACSALASGVLYGAFSLQDLFPTIASGCSWTLENPDPTKYSLYLRFNRQEQV CAHFAPRLLPLDHYLVNFTCLRPSPEEAVAQAESEVGRPEEEEAEAAAGLELCSGSGPFTFLHFDKNFVQLCLSAEPSEAPRLLAPAALA FRFVEVLLINNNNSSQFTCGVLCRWSEECGRAAGRACGFAQPGCSCPGEAGAGSTTTTSPGPPAAHTLSNALVPGGPAPPAEADLHSGSS NDLFTTEMRYGEEPEEEPKVKTQWPRSADEPGLYMAQTVHGVWEEWGSWSLCSRSCGRGSRSRMRTCVPPQHGGKACEGPELQTKLCSMA ACPVEGQWLEWGPWGPCSTSCANGTQQRSRKCSVAGPAWATCTGALTDTRECSNLECPATDSKWGPWNAWSLCSKTCDTGWQRRFRMCQA TGTQGYPCEGTGEEVKPCSEKRCPAFHEMCRDEYVMLMTWKKAAAGEIIYNKCPPNASGSASRRCLLSAQGVAYWGLPSFARCISHEYRY LYLSLREHLAKGQRMLAGEGMSQVVRSLQELLARRTYYSGDLLFSVDILRNVTDTFKRATYVPSADDVQRFFQVVSFMVDAENKEKWDDA QQVSPGSVHLLRVVEDFIHLVGDALKAFQSSLIVTDNLVISIQREPVSAVSSDITFPMRGRRGMKDWVRHSEDRLFLPKEVLSLSSPGKP ATSGAAGSPGRGRGPGTVPPGPGHSHQRLLPADPDESSYFVIGAVLYRTLGLILPPPRPPLAVTSRVMTVTVRPPTQPPAEPLITVELSY IINGTTDPHCASWDYSRADASSGDWDTENCQTLETQAAHTRCQCQHLSTFAVLAQPPKDLTLELAGSPSVPLVIGCAVSCMALLTLLAIY AAFWRFIKSERSIILLNFCLSILASNILILVGQSRVLSKGVCTMTAAFLHFFFLSSFCWVLTEAWQSYLAVIGRMRTRLVRKRFLCLGWG LPALVVAVSVGFTRTKGYGTSSYCWLSLEGGLLYAFVGPAAVIVLVNMLIGIIVFNKLMARDGISDKSKKQRAGASLWSSCVVLPLLALT WMSAVLAMTDRRSVLFQALFAVFNSAQGFVITAVHCFLRREVQDVVKCQMGVCRADESEDSPDSCKNGQLQILSDFEKDVDLACQTVLFK EVNTCNPSTITGTLSRLSLDEDEEPKSCLVGPEGSLSFSPLPGNILVPMAASPGLGEPPPPQEANPVYMCGEGGLRQLDLTWLRPTEPGS EGDYMVLPRRTLSLQPGGGGGGGEDAPRARPEGTPRRAAKTVAHTEGYPSFLSVDHSGLGLGPAYGSLQNPYGMTFQPPPPTPSARQVPE PGERSRTMPRTVPGSTMKMGSLERKKLRYSDLDFEKVMHTRKRHSELYHELNQKFHTFDRYRSQSTAKREKRWSVSSGGAAERSVCTDKP -------------------------------------------------------------- >70657_70657_2_PUM1-BAI2_PUM1_chr1_31532051_ENST00000373742_BAI2_chr1_32222416_ENST00000398556_length(transcript)=5247nt_BP=471nt ATGCCGCTGCCACCGCCGGGGCCGGGGCCGGAGCCTATCCCAGGATGCACCGCGCCAACCCAGTCCCCAGTGGGCCGCCATGTTGTCGGA GTGAAAGGTGTTGGTGGAATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACAT CACCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAACCAGCTGCAAATCAG GCTCTTGCAGCTGGGACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGTTCCCAGGACGACGCTATGGTGGACTACTTC TTTCAGAGGCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGGAGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGAT AACATTCATGCAGAACATCAGGGCAAGGGACATAGGATGACCCCAGCCTGTCCCCTCTTACTGTCTGTGATTCTGTCCCTGCGCCTGGCC ACCGCCTTCGACCCCGCCCCCAGTGCCTGCTCTGCCCTGGCCTCGGGTGTGCTCTACGGGGCCTTCTCGCTGCAGGACCTCTTTCCTACC ATCGCCTCGGGCTGCTCCTGGACCCTGGAGAACCCTGACCCCACCAAGTACTCCCTCTACCTGCGCTTCAACCGCCAGGAGCAGGTGTGC GCACACTTTGCCCCCCGCCTGCTGCCCCTGGACCACTACCTGGTCAACTTTACCTGCCTGCGGCCTAGCCCCGAGGAGGCGGTGGCCCAG GCGGAGTCAGAGGTGGGGCGGCCAGAAGAGGAGGAGGCAGAGGCGGCAGCGGGGTTGGAGCTGTGCAGCGGCTCAGGCCCCTTTACCTTC CTGCACTTCGACAAGAACTTCGTGCAGCTGTGCCTGTCGGCTGAGCCCTCCGAGGCCCCGCGCCTGCTGGCGCCCGCTGCCCTAGCCTTC CGCTTTGTCGAGGTCTTGCTCATCAACAACAACAACTCTAGCCAATTCACCTGTGGTGTGCTCTGCCGCTGGAGTGAGGAGTGTGGCCGC GCTGCCGGCAGGGCCTGCGGCTTTGCTCAGCCAGGCTGCAGCTGCCCTGGAGAGGCGGGGGCCGGCTCCACCACCACCACATCTCCAGGC CCTCCTGCTGCCCACACCCTGTCCAATGCCCTGGTGCCCGGGGGCCCAGCCCCACCTGCTGAGGCCGATTTGCACTCGGGGAGCAGCAAT GATCTGTTCACAACCGAGATGAGATATGGTGAGGAGCCGGAAGAGGAACCGAAAGTGAAAACCCAGTGGCCGAGGTCTGCAGATGAGCCT GGGCTATACATGGCGCAGACAGTGCACGGCGTGTGGGAGGAGTGGGGGTCCTGGAGCCTGTGCTCCCGCAGCTGCGGGCGGGGGTCCCGG AGCCGGATGCGGACCTGCGTGCCCCCCCAGCACGGCGGCAAGGCCTGCGAGGGTCCTGAGCTGCAGACTAAGCTCTGCAGTATGGCTGCC TGCCCGGTGGAAGGCCAGTGGTTAGAATGGGGTCCCTGGGGCCCATGCTCCACGTCCTGTGCCAATGGGACCCAACAGCGCAGCCGGAAG TGCAGCGTGGCGGGCCCAGCCTGGGCCACATGCACGGGTGCCCTCACTGACACCCGGGAGTGCAGCAACCTCGAGTGCCCGGCCACTGAT AGCAAGTGGGGGCCATGGAATGCGTGGAGCCTGTGCTCTAAGACGTGTGACACAGGCTGGCAGCGCCGCTTCCGCATGTGCCAGGCCACG GGCACGCAGGGCTACCCCTGCGAGGGCACCGGAGAGGAGGTGAAGCCTTGTAGTGAGAAGAGGTGTCCAGCCTTCCATGAGATGTGCAGG GATGAGTACGTGATGCTGATGACGTGGAAGAAGGCAGCTGCTGGCGAGATCATCTACAACAAGTGCCCCCCGAATGCCTCAGGGTCTGCC AGCCGCCGCTGTCTCCTCAGTGCCCAAGGCGTGGCGTACTGGGGGCTGCCCAGCTTTGCTCGCTGCATCTCCCATGAGTACCGCTACCTG TATCTGTCACTTAGGGAGCACCTGGCCAAGGGGCAGCGCATGCTGGCAGGCGAGGGCATGTCGCAGGTGGTGCGCAGCCTGCAGGAGCTA CTGGCCCGGCGCACCTACTATAGTGGGGACCTGCTCTTCTCTGTGGACATTCTGAGGAATGTCACTGACACCTTTAAGAGGGCCACCTAC GTGCCCTCGGCTGATGATGTGCAGCGCTTCTTCCAGGTGGTGAGCTTCATGGTGGATGCGGAAAACAAGGAGAAGTGGGACGATGCTCAG CAGGTGTCCCCTGGCTCTGTGCACCTGCTCCGTGTCGTGGAGGACTTCATTCACCTGGTGGGCGATGCTCTCAAGGCCTTCCAGAGCTCT CTGATTGTCACAGATAATCTAGTGATCAGCATTCAGCGAGAGCCCGTCTCAGCTGTGTCCAGTGACATCACGTTCCCCATGCGGGGCCGC CGGGGCATGAAGGACTGGGTGCGGCACTCAGAGGACCGCCTCTTCCTGCCCAAGGAGGTGCTCAGCCTCTCCTCCCCAGGGAAGCCAGCC ACATCTGGGGCAGCAGGCAGCCCTGGCAGGGGGAGGGGCCCAGGAACGGTGCCTCCTGGCCCAGGCCACTCCCACCAGCGCCTCCTCCCA GCAGACCCTGATGAGTCCTCCTACTTTGTGATCGGTGCTGTACTCTACCGCACCCTTGGCCTCATCCTGCCGCCTCCCAGGCCCCCGCTG GCCGTCACATCCCGGGTGATGACAGTGACTGTGCGCCCCCCTACCCAGCCTCCAGCTGAGCCCCTCATCACTGTGGAGCTCTCCTACATC ATCAATGGGACCACGGATCCCCATTGCGCCAGCTGGGACTACTCCAGAGCAGATGCCAGCTCAGGAGACTGGGACACTGAAAATTGCCAG ACCCTGGAGACCCAGGCAGCTCACACCCGCTGCCAGTGCCAGCACCTGTCCACCTTTGCTGTACTAGCCCAGCCGCCCAAGGACCTGACC CTGGAGCTGGCGGGCTCCCCCTCGGTCCCCCTGGTGATCGGCTGTGCAGTGTCGTGCATGGCGCTGCTCACCCTGCTCGCCATCTATGCC GCCTTTTGGAGGTTCATAAAATCTGAACGCTCCATCATCTTGCTGAACTTCTGCCTGTCCATCTTGGCATCCAACATCCTGATCCTCGTG GGCCAGTCCCGGGTGCTGAGCAAGGGCGTGTGCACCATGACGGCTGCCTTCCTGCACTTCTTCTTTCTCTCCTCCTTTTGCTGGGTGCTT ACCGAGGCCTGGCAGTCCTACCTGGCTGTCATTGGGCGGATGCGCACCCGCCTCGTTCGCAAGCGCTTCCTCTGCCTGGGCTGGGGTCTG CCTGCCCTGGTGGTGGCCGTGTCTGTTGGCTTTACCCGAACGAAAGGATACGGTACATCCAGCTACTGCTGGCTCTCCCTGGAGGGCGGC CTGCTCTACGCCTTTGTGGGCCCTGCAGCCGTCATTGTCCTGGTGAACATGCTCATCGGAATCATCGTCTTCAACAAGCTCATGGCACGT GATGGCATCTCCGACAAATCCAAGAAGCAGAGGGCCGGGGCCTCACTCTGGAGCTCCTGCGTGGTGCTGCCCCTGCTGGCGCTCACCTGG ATGTCTGCCGTCCTGGCTATGACAGACCGCCGTTCCGTCCTCTTCCAGGCCCTCTTTGCTGTCTTCAACTCCGCGCAGGGCTTTGTCATC ACTGCTGTGCACTGCTTCCTGCGCCGAGAGGTCCAGGATGTGGTGAAGTGCCAGATGGGGGTGTGCCGGGCTGATGAGAGCGAAGACTCC CCTGACTCGTGTAAGAACGGGCAGCTGCAGATCCTGTCAGACTTTGAAAAGGATGTGGATCTGGCTTGTCAAACAGTGCTGTTCAAGGAG GTCAACACTTGCAACCCGTCCACCATCACGGGCACACTATCCCGCCTGTCCCTGGATGAGGATGAGGAGCCCAAGTCCTGCCTCGTGGGC CCTGAGGGCAGCCTCAGCTTCTCACCACTGCCTGGGAATATCCTGGTGCCCATGGCAGCCTCACCAGGGCTGGGGGAGCCTCCGCCCCCA CAGGAGGCCAACCCTGTTTACATGTGTGGGGAGGGTGGCCTGCGGCAGCTGGACCTCACATGGCTGCGGCCCACTGAGCCAGGCTCTGAG GGAGACTACATGGTGCTGCCCCGGCGGACTTTGAGCCTGCAGCCTGGCGGTGGGGGTGGAGGTGGTGAGGATGCCCCCAGGGCCCGGCCG GAGGGGACCCCCCGGCGAGCTGCCAAGACAGTGGCCCACACTGAAGGCTACCCCAGCTTCCTGTCCGTGGACCACTCGGGCCTGGGGCTG GGCCCTGCCTATGGATCTCTCCAGAATCCCTATGGAATGACCTTCCAACCGCCACCGCCGACACCCAGCGCCCGCCAAGTGCCCGAGCCA GGGGAGCGCAGCCGGACCATGCCTCGCACCGTGCCCGGCTCTACCATGAAGATGGGCTCCCTGGAGCGAAAGAAATTACGGTATTCAGAC CTGGACTTTGAGAAGGTGATGCACACCCGGAAACGGCATTCAGAACTCTACCACGAGCTCAACCAGAAGTTCCACACTTTCGACCGCTAC CGCAGCCAGTCCACGGCCAAGAGGGAGAAGCGGTGGAGTGTGTCCTCGGGTGGGGCAGCCGAGCGGAGCGTGTGCACCGATAAGCCCAGC CCTGGGGAGCGCCCCAGCTTGTCCCAACATCGGCGCCATCAGAGCTGGAGCACCTTCAAATCTATGACACTGGGCTCGCTGCCCCCCAAG CCCCGAGAACGGCTGACTCTGCACCGGGCAGCAGCCTGGGAGCCCACAGAACCACCGGATGGTGACTTCCAGACAGAGGTGTGAGTGCCA CGCTGGACTGCCCACTGCATATAAATATATATATCTCTCTATTTTCACACTCCACTTTGGAACTACCCAGGAGCCAGCGCCCTCTCCCCT CTCCCGAGGGCTGGGCAGGGAGGCGCCGTGGACTCAGCCAGGCTGGGGGAGCCGGACATGGCTTGGCCTGGGGTCCCAGGGCCCTTCCTT GTTTCTCAGAGGCCCCTCAGCCACTGGAACCCCATCTTCAGCCCAGCCTGTCCGTCCCTGTCCCGGGCTGGGGAGGGGGGAGGGGAACTT >70657_70657_2_PUM1-BAI2_PUM1_chr1_31532051_ENST00000373742_BAI2_chr1_32222416_ENST00000398556_length(amino acids)=1647AA_BP=3 MPLPPPGPGPEPIPGCTAPTQSPVGRHVVGVKGVGGMSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQ ALAAGTHSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEHQGKGHRMTPACPLLLSVILSLRLA TAFDPAPSACSALASGVLYGAFSLQDLFPTIASGCSWTLENPDPTKYSLYLRFNRQEQVCAHFAPRLLPLDHYLVNFTCLRPSPEEAVAQ AESEVGRPEEEEAEAAAGLELCSGSGPFTFLHFDKNFVQLCLSAEPSEAPRLLAPAALAFRFVEVLLINNNNSSQFTCGVLCRWSEECGR AAGRACGFAQPGCSCPGEAGAGSTTTTSPGPPAAHTLSNALVPGGPAPPAEADLHSGSSNDLFTTEMRYGEEPEEEPKVKTQWPRSADEP GLYMAQTVHGVWEEWGSWSLCSRSCGRGSRSRMRTCVPPQHGGKACEGPELQTKLCSMAACPVEGQWLEWGPWGPCSTSCANGTQQRSRK CSVAGPAWATCTGALTDTRECSNLECPATDSKWGPWNAWSLCSKTCDTGWQRRFRMCQATGTQGYPCEGTGEEVKPCSEKRCPAFHEMCR DEYVMLMTWKKAAAGEIIYNKCPPNASGSASRRCLLSAQGVAYWGLPSFARCISHEYRYLYLSLREHLAKGQRMLAGEGMSQVVRSLQEL LARRTYYSGDLLFSVDILRNVTDTFKRATYVPSADDVQRFFQVVSFMVDAENKEKWDDAQQVSPGSVHLLRVVEDFIHLVGDALKAFQSS LIVTDNLVISIQREPVSAVSSDITFPMRGRRGMKDWVRHSEDRLFLPKEVLSLSSPGKPATSGAAGSPGRGRGPGTVPPGPGHSHQRLLP ADPDESSYFVIGAVLYRTLGLILPPPRPPLAVTSRVMTVTVRPPTQPPAEPLITVELSYIINGTTDPHCASWDYSRADASSGDWDTENCQ TLETQAAHTRCQCQHLSTFAVLAQPPKDLTLELAGSPSVPLVIGCAVSCMALLTLLAIYAAFWRFIKSERSIILLNFCLSILASNILILV GQSRVLSKGVCTMTAAFLHFFFLSSFCWVLTEAWQSYLAVIGRMRTRLVRKRFLCLGWGLPALVVAVSVGFTRTKGYGTSSYCWLSLEGG LLYAFVGPAAVIVLVNMLIGIIVFNKLMARDGISDKSKKQRAGASLWSSCVVLPLLALTWMSAVLAMTDRRSVLFQALFAVFNSAQGFVI TAVHCFLRREVQDVVKCQMGVCRADESEDSPDSCKNGQLQILSDFEKDVDLACQTVLFKEVNTCNPSTITGTLSRLSLDEDEEPKSCLVG PEGSLSFSPLPGNILVPMAASPGLGEPPPPQEANPVYMCGEGGLRQLDLTWLRPTEPGSEGDYMVLPRRTLSLQPGGGGGGGEDAPRARP EGTPRRAAKTVAHTEGYPSFLSVDHSGLGLGPAYGSLQNPYGMTFQPPPPTPSARQVPEPGERSRTMPRTVPGSTMKMGSLERKKLRYSD LDFEKVMHTRKRHSELYHELNQKFHTFDRYRSQSTAKREKRWSVSSGGAAERSVCTDKPSPGERPSLSQHRRHQSWSTFKSMTLGSLPPK -------------------------------------------------------------- |
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Fusion Gene PPI Analysis for PUM1-BAI2 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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Related Drugs for PUM1-BAI2 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.8 2021-05-08) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for PUM1-BAI2 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | PUM1 | C0004134 | Ataxia | 1 | GENOMICS_ENGLAND |
| Hgene | PUM1 | C0010417 | Cryptorchidism | 1 | GENOMICS_ENGLAND |
| Hgene | PUM1 | C0019193 | Hepatitis, Toxic | 1 | CTD_human |
| Hgene | PUM1 | C0036572 | Seizures | 1 | GENOMICS_ENGLAND |
| Hgene | PUM1 | C0557874 | Global developmental delay | 1 | GENOMICS_ENGLAND |
| Hgene | PUM1 | C0860207 | Drug-Induced Liver Disease | 1 | CTD_human |
| Hgene | PUM1 | C1262760 | Hepatitis, Drug-Induced | 1 | CTD_human |
| Hgene | PUM1 | C3658290 | Drug-Induced Acute Liver Injury | 1 | CTD_human |
| Hgene | PUM1 | C3714756 | Intellectual Disability | 1 | GENOMICS_ENGLAND |
| Hgene | PUM1 | C4025871 | Abnormality of the face | 1 | GENOMICS_ENGLAND |
| Hgene | PUM1 | C4277682 | Chemical and Drug Induced Liver Injury | 1 | CTD_human |
| Hgene | PUM1 | C4279912 | Chemically-Induced Liver Toxicity | 1 | CTD_human |
| Hgene | PUM1 | C4693672 | SPINOCEREBELLAR ATAXIA 47 | 1 | GENOMICS_ENGLAND;UNIPROT |
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