Fusion Gene Studies
in Kim Lab

FusionBase FusionGDB FusionGDB2 FusionPDB FusionNeoAntigen FusionAI FusionAI protocol FusionNW FGviewer FusionScan Fusion gene & MMEJ Predict fusion protein 3D structure Publication Contact
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bullet point Citation of the Database
    To cite the FusionGDB website in a publication, please quote the following:
    - Kim P*, Tan H, Liu J, Lee H, Jung H, Kumar H, and Zhou X. FusionGDB 2.0: fusion gene annotation update aided by deep learning. Nucleic Acids Res. 2021 Nov 10; doi: 10.1093/nar/gkab1056
    - Kim P*, Tan H, Liu J, Yang M, and Zhou X*, FusionAI: Predicting fusion breakpoint from DNA sequence with deep learning. iScience. 2021 Sep 25; 24(10):103164. doi: 10.1016/j.isci.2021.103164.
    - Kim P*, Yiya K*, and Zhou X*. FGviewer: an online visualization tool for functional features of human fusion genes. Nucleic Acids Res. 2020 Jul 2;48(W1):W313-W320.
    - Kim P and Zhou X*. FusionGDB: fusion gene annotation DataBase. Nucleic Acids Res. 2019 Jan 8;47(D1):D994-D1004
    - Kim P, Jang YE, and Lee S*. FusionScan: accurate prediction of fusion genes from RNA-Seq data. Genomics Inform. 2019 Sep; 17(3):e26. doi: 10.5808/GI.2019.17.3.e26
    - Kim P, Yoon S, Kim N, Lee S, Ko M, Lee H, Kang H, Kimg J, and Lee S*. ChimerDB 2.0--a knowledgebase for fusion genes updated. Nucleic Acids Res. 2020 Jan; (D38):D81-D85. doi: 10.1093/nar/gkp982

bullet point Contact Info
  • Pora Kim, Ph.D. and MS
  • Email: [email protected]
  • Mailing address:
    •   Center for Computational Systems Medicine
      School of Biomedical Informatics
      The University of Texas Health Science Center at Houston
      7000 Fannin Street, Houston, TX 77030