|
Translation Factor: PIWIL4 (NCBI Gene ID:143689) |
|
Gene Summary |
Gene Information | Gene Name: PIWIL4 | Gene ID: 143689 | Gene Symbol | PIWIL4 | Gene ID | 143689 |
Gene Name | piwi like RNA-mediated gene silencing 4 | |
Synonyms | HIWI2|MIWI2 | |
Cytomap | 11q21 | |
Type of Gene | protein-coding | |
Description | piwi-like protein 4piwi-like 4testis tissue sperm-binding protein Li 85P | |
Modification date | 20200313 | |
UniProtAcc | Q7Z3Z4 |
Child GO biological process term(s) under GO:0006412 |
GO ID | GO term |
GO:0006417 | Regulation of translation |
GO:0006412 | Translation |
Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Inferred gene age of translation factor. |
Gene | Inferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25 |
PIWIL4 | (355.7 - 733] |
Top |
|
We searched PubMed using 'PIWIL4[title] AND translation [title] AND human.' |
Gene | Title | PMID |
PIWIL4 | . | . |
Top |
|
Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. For more annotations, please visit our ExonSkipDB. |
Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | ORF |
ENST00000299001 | 94308164 | 94308296 | In-frame |
ENST00000299001 | 94337149 | 94337222 | Frame-shift |
ENST00000299001 | 94341748 | 94341852 | Frame-shift |
Exon skipping position in the amino acid sequence. |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | Len(transcript seq) | Exon skip start (mRNA) | Exon Skip end (mRNA) | Len(amino acid seq) | Exon skip start (AA) | Exon Skip end (AA) |
ENST00000299001 | 94308164 | 94308296 | 3216 | 378 | 509 | 852 | 55 | 99 |
Potentially (partially) lost protein functional features of UniProt. |
UniProtAcc | Exon skip start (AA) | Exon Skip end (AA) | Function feature start (AA) | Function feature end (AA) | Functional feature type | Functional feature desc. |
Q7Z3Z4 | 55 | 99 | 1 | 852 | Chain | ID=PRO_0000234572;Note=Piwi-like protein 4 |
Q7Z3Z4 | 55 | 99 | 1 | 69 | Alternative sequence | ID=VSP_036665;Note=In isoform 3. Missing;Ontology_term=ECO:0000303;evidence=ECO:0000303|PubMed:14702039;Dbxref=PMID:14702039 |
Q7Z3Z4 | 55 | 99 | 78 | 78 | Natural variant | ID=VAR_028367;Note=Q->R;Dbxref=dbSNP:rs12276921 |
Q7Z3Z4 | 55 | 99 | 99 | 99 | Sequence conflict | Note=T->A;Ontology_term=ECO:0000305;evidence=ECO:0000305 |
Top |
|
Gene expression level across TCGA pancancer |
Gene expression level across GTEx pantissue |
Expression level of gene isoforms across TCGA pancancer |
Expression level of gene isoforms across GTEx pantissue |
Cancer(tissue) type-specific expression level of Translation factor using z-score distriution |
Differential expression between tumor and matched normal (in the cancer types with more than 10 matched samples) |
Cancer type | Translation factor | FC | adj.pval |
PRAD | PIWIL4 | 3.29305378581944 | 5.60797254840577e-07 |
Top |
|
Translation factor expression regulation through miRNA binding |
Cancer type | Gene | miRNA | TargetScan binding score (Context++ score percentile) | Coefficient | Pvalue |
Translation factor expression regulation through methylation in the promoter of Translation factor |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
Translation factor expression regulation through methylation in the gene body of Translation factor (positive regulation) |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
Translation factor expression regulation through copy number variation of Translation factor |
Cancer type | Gene | Coefficient | Pvalue |
OV | PIWIL4 | -0.046521126 | 0.001955708 |
Top |
|
Strongly correlated genes belong to cellular important gene groups with PIWIL4 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green) |
Cancer type | Gene group | Translation factor | Correlated gene | Coefficient | Pvalue |
CHOL | Epifactor | PIWIL4 | VPS72 | 0.813707371 | 1.09E-11 |
CHOL | IUPHAR | PIWIL4 | LPAR2 | 0.814444382 | 1.01E-11 |
DLBC | IUPHAR | PIWIL4 | SLC9A9 | 0.818021303 | 1.27E-12 |
TGCT | TSG | PIWIL4 | HECA | 0.804872907 | 1.00E-36 |
UVM | Cell metabolism gene | PIWIL4 | ME2 | 0.835871327 | 5.15E-22 |
UVM | IUPHAR | PIWIL4 | IFNGR1 | 0.813287231 | 4.98E-20 |
UVM | TF | PIWIL4 | ZNF75D | 0.802937267 | 3.31E-19 |
Top |
|
Protein 3D structure Visit iCn3D. |
Top |
|
Protein-protein interaction networks * Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
Overlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
* Edge colors based on TCGA cancer types. |
* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P)) |
Cancer type | Translation factor | Interacting protein coding gene | FC | adj.pval |
LIHC | PIWIL4 | TDRKH | -2.35054040805301 | 0.000154274946618889 |
LIHC | PIWIL4 | HSP90AA1 | -1.87137739671902 | 0.0003817245773207 |
STAD | PIWIL4 | TDRKH | -1.54610939736591 | 0.000772962812334299 |
PRAD | PIWIL4 | MAEL | -2.3661636167606 | 0.000817525595737914 |
LUAD | PIWIL4 | MAEL | -6.19185333647027 | 0.0016989769898434 |
HNSC | PIWIL4 | TDRD1 | -2.22172147165928 | 0.00186235073124408 |
KIRP | PIWIL4 | TDRD9 | -1.44317546534812 | 0.00239070039242506 |
BLCA | PIWIL4 | MOV10L1 | -2.2459025740491 | 0.0033416748046875 |
KIRP | PIWIL4 | FKBP6 | -1.06618123891793 | 0.00378712571418864 |
LUAD | PIWIL4 | FKBP6 | -2.54133050249485 | 0.007411236655529 |
COAD | PIWIL4 | MOV10L1 | -1.2507305928268 | 0.00793844461441041 |
PRAD | PIWIL4 | DICER1 | 1.54768558737379 | 0.0130781232419534 |
CHOL | PIWIL4 | FKBP6 | -3.42220640119472 | 0.0208625823327655 |
ESCA | PIWIL4 | HSP90AA1 | -2.95407832928575 | 0.0322265625 |
CHOL | PIWIL4 | TDRKH | -3.94276179244914 | 0.0390625 |
BLCA | PIWIL4 | TDRD9 | 1.06553720728077 | 0.040130615234375 |
KICH | PIWIL4 | TDRKH | 1.37293937269262 | 1.0073184967041e-05 |
BRCA | PIWIL4 | HSP90AA1 | 2.1978220577015 | 1.13731762084626e-08 |
PRAD | PIWIL4 | TDRD1 | 2.58804684959852 | 1.77484038698563e-08 |
KIRP | PIWIL4 | MOV10L1 | 2.29966204672133 | 2.0815059542656e-07 |
KIRC | PIWIL4 | TDRD9 | -2.07747875035683 | 2.55316341696988e-08 |
BRCA | PIWIL4 | MAEL | -1.18581225781999 | 2.88434406714333e-05 |
THCA | PIWIL4 | TDRD9 | -1.37443883161284 | 3.30629686127371e-10 |
STAD | PIWIL4 | HSP90AA1 | -1.65705125430285 | 3.51201742887497e-06 |
BRCA | PIWIL4 | TNRC6A | -1.24656754002514 | 3.76762765813611e-06 |
KIRC | PIWIL4 | TDRKH | 1.35420573562768 | 3.87430708887757e-09 |
LUAD | PIWIL4 | TDRD9 | -2.98578541487185 | 4.65161857317772e-05 |
COAD | PIWIL4 | TDRKH | -1.761968138371 | 6.03199005126954e-05 |
Protein-protein interactors with this translation factor (BIOGRID-3.4.160) |
PPI interactors with PIWIL4 |
DICER1, RELA, HIST1H1B, NEK4, PRSS1, CSTA, DCD, FABP5, KPRP, DDX39A, BEND3, TDRKH, FCHO1, PCDHGA9, |
Top |
|
Clinically associated variants from ClinVar. |
Gene | Chr | Position | RefSeq | VarSeq | RefSeeq | VarType | Pathogenic | Disease | VarInfo |
PIWIL4 | chr11 | 94318680 | T | A | single_nucleotide_variant | Benign | not_provided | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
PIWIL4 | chr11 | 94320265 | A | C | single_nucleotide_variant | Likely_benign | not_provided | SO:0001583|missense_variant | SO:0001583|missense_variant |
PIWIL4 | chr11 | 94320300 | C | T | single_nucleotide_variant | Benign | not_provided | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
PIWIL4 | chr11 | 94320305 | G | A | single_nucleotide_variant | Likely_benign | not_provided | SO:0001583|missense_variant | SO:0001583|missense_variant |
PIWIL4 | chr11 | 94326720 | A | G | single_nucleotide_variant | Benign | not_provided | SO:0001583|missense_variant,SO:0001619|non-coding_transcript_variant | SO:0001583|missense_variant,SO:0001619|non-coding_transcript_variant |
PIWIL4 | chr11 | 94330966 | A | G | single_nucleotide_variant | Benign | not_provided | SO:0001627|intron_variant | SO:0001627|intron_variant |
PIWIL4 | chr11 | 94335094 | G | T | single_nucleotide_variant | Likely_benign | not_provided | SO:0001583|missense_variant | SO:0001583|missense_variant |
PIWIL4 | chr11 | 94340728 | A | G | single_nucleotide_variant | Benign | not_provided | SO:0001583|missense_variant | SO:0001583|missense_variant |
nsSNVs with sample frequency (size of circle) from TCGA 33 cancers. |
SNVs and Indels |
Gene | Cancer type | Chromosome | Start | End | RefSeeq | MutSeq | Mutation type | AAchange | # samples |
PIWIL4 | LUAD | chr11 | 94322291 | 94322291 | A | G | Missense_Mutation | p.N307D | 5 |
PIWIL4 | CESC | chr11 | 94322352 | 94322352 | A | T | Missense_Mutation | 5 | |
PIWIL4 | CESC | chr11 | 94322353 | 94322353 | G | A | Silent | 5 | |
PIWIL4 | COAD | chr11 | 94352981 | 94352981 | G | A | Missense_Mutation | p.E742K | 4 |
PIWIL4 | LUAD | chr11 | 94330994 | 94330994 | A | G | Silent | p.L431L | 4 |
PIWIL4 | UCEC | chr11 | 94310653 | 94310653 | G | T | Nonsense_Mutation | p.E170* | 4 |
PIWIL4 | SKCM | chr11 | 94341758 | 94341758 | C | T | Silent | p.L617L | 3 |
PIWIL4 | UCS | chr11 | 94322371 | 94322371 | G | T | Missense_Mutation | p.E333D | 3 |
PIWIL4 | BRCA | chr11 | 94308183 | 94308183 | C | G | Missense_Mutation | p.S62C | 3 |
PIWIL4 | UCS | chr11 | 94318621 | 94318621 | A | C | Missense_Mutation | p.K216Q | 3 |
PIWIL4 | LIHC | chr11 | 94353216 | 94353216 | C | A | Missense_Mutation | p.T783N | 3 |
PIWIL4 | UCS | chr11 | 94310616 | 94310616 | C | T | Silent | p.F157F | 3 |
PIWIL4 | UCEC | chr11 | 94301960 | 94301960 | G | A | Missense_Mutation | p.R51K | 3 |
PIWIL4 | CESC | chr11 | 94337148 | 94337148 | A | G | Splice_Site | 3 | |
PIWIL4 | BLCA | chr11 | 94310554 | 94310554 | A | G | Missense_Mutation | p.R137G | 3 |
PIWIL4 | UCEC | chr11 | 94351149 | 94351149 | C | G | Missense_Mutation | p.H682D | 3 |
PIWIL4 | KIRP | chr11 | 94340737 | 94340737 | A | G | Missense_Mutation | p.I591V | 3 |
PIWIL4 | PAAD | chr11 | 94310447 | 94310447 | C | A | Missense_Mutation | p.S101Y | 3 |
PIWIL4 | KIRP | chr11 | 94341805 | 94341805 | C | T | Silent | p.D632D | 3 |
PIWIL4 | LIHC | chr11 | 94353216 | 94353216 | C | A | Missense_Mutation | 3 | |
PIWIL4 | STAD | chr11 | 94340624 | 94340624 | C | A | Missense_Mutation | p.S553Y | 2 |
PIWIL4 | UCEC | chr11 | 94335001 | 94335001 | G | A | Missense_Mutation | p.R474Q | 2 |
PIWIL4 | BRCA | chr11 | 94331003 | 94331003 | G | C | Missense_Mutation | p.W434C | 2 |
PIWIL4 | HNSC | chr11 | 94320237 | 94320237 | T | C | Silent | 2 | |
PIWIL4 | LIHC | chr11 | 94318670 | 94318670 | C | A | Missense_Mutation | 2 | |
PIWIL4 | STAD | chr11 | 94316686 | 94316686 | C | T | Missense_Mutation | p.P196S | 2 |
PIWIL4 | CESC | chr11 | 94326762 | 94326762 | G | A | Missense_Mutation | p.E369K | 2 |
PIWIL4 | BLCA | chr11 | 94335120 | 94335120 | G | A | Missense_Mutation | p.G514R | 2 |
PIWIL4 | COAD | chr11 | 94337220 | 94337220 | C | T | Silent | p.L546L | 2 |
PIWIL4 | SKCM | chr11 | 94310540 | 94310540 | C | T | Missense_Mutation | p.P132L | 2 |
PIWIL4 | SKCM | chr11 | 94334973 | 94334973 | T | A | Missense_Mutation | p.S465T | 2 |
PIWIL4 | UCEC | chr11 | 94340607 | 94340607 | A | G | Silent | p.V547 | 2 |
PIWIL4 | STAD | chr11 | 94308224 | 94308224 | A | C | Missense_Mutation | p.N76H | 2 |
PIWIL4 | BLCA | chr11 | 94326765 | 94326765 | G | C | Missense_Mutation | 2 | |
PIWIL4 | BLCA | chr11 | 94340677 | 94340677 | C | T | Missense_Mutation | p.P571S | 2 |
PIWIL4 | SKCM | chr11 | 94341757 | 94341757 | C | T | Silent | p.S616S | 2 |
PIWIL4 | UCEC | chr11 | 94340634 | 94340634 | G | T | Missense_Mutation | p.K556N | 2 |
PIWIL4 | STAD | chr11 | 94340675 | 94340675 | G | A | Missense_Mutation | p.C570Y | 2 |
PIWIL4 | BLCA | chr11 | 94316613 | 94316613 | G | A | Splice_Site | 2 | |
PIWIL4 | BLCA | chr11 | 94328539 | 94328539 | C | G | Silent | p.L405L | 2 |
PIWIL4 | KICH | chr11 | 94353042 | 94353042 | G | A | Missense_Mutation | p.R762H | 2 |
PIWIL4 | LIHC | chr11 | 94318670 | 94318670 | C | A | Missense_Mutation | p.P232Q | 2 |
PIWIL4 | SKCM | chr11 | 94320221 | 94320221 | C | T | Missense_Mutation | p.S241F | 2 |
PIWIL4 | UCEC | chr11 | 94341805 | 94341805 | C | T | Silent | p.D632 | 2 |
PIWIL4 | CESC | chr11 | 94326762 | 94326762 | G | A | Missense_Mutation | 2 | |
PIWIL4 | HNSC | chr11 | 94341767 | 94341767 | G | A | Missense_Mutation | p.V620I | 2 |
PIWIL4 | STAD | chr11 | 94328536 | 94328536 | T | C | Silent | p.R404R | 2 |
PIWIL4 | KIRC | chr11 | 94308185 | 94308185 | G | C | Missense_Mutation | p.G63R | 2 |
PIWIL4 | SKCM | chr11 | 94352941 | 94352941 | G | A | Silent | p.V728V | 2 |
PIWIL4 | UCEC | chr11 | 94351164 | 94351164 | C | T | Missense_Mutation | p.R687W | 2 |
PIWIL4 | HNSC | chr11 | 94349700 | 94349700 | T | C | Missense_Mutation | p.V662A | 2 |
PIWIL4 | LAML | chr11 | 93940384 | 93940384 | G | C | Missense_Mutation | p.A18P | 2 |
PIWIL4 | LIHC | chr11 | 94331044 | 94331044 | T | C | Missense_Mutation | 2 | |
PIWIL4 | STAD | chr11 | 94326774 | 94326774 | G | A | Missense_Mutation | p.A373T | 2 |
PIWIL4 | LIHC | chr11 | 94354059 | 94354059 | A | T | Silent | p.P820P | 2 |
PIWIL4 | SKCM | chr11 | 94318641 | 94318641 | T | C | Silent | p.I222I | 2 |
PIWIL4 | UCEC | chr11 | 94352990 | 94352990 | C | T | Missense_Mutation | p.R745C | 2 |
PIWIL4 | LGG | chr11 | 94328504 | 94328504 | C | T | Nonsense_Mutation | p.Q394* | 2 |
PIWIL4 | LIHC | chr11 | 94351131 | 94351131 | A | G | Missense_Mutation | 2 | |
PIWIL4 | PAAD | chr11 | 94310447 | 94310447 | C | A | Missense_Mutation | 2 | |
PIWIL4 | STAD | chr11 | 94326792 | 94326792 | C | T | Missense_Mutation | p.L379F | 2 |
PIWIL4 | SKCM | chr11 | 94316683 | 94316683 | C | T | Silent | p.L195L | 2 |
PIWIL4 | UCEC | chr11 | 94308223 | 94308223 | A | C | Missense_Mutation | p.K75N | 2 |
PIWIL4 | UCEC | chr11 | 94353018 | 94353018 | C | A | Missense_Mutation | p.T754N | 2 |
PIWIL4 | LIHC | chr11 | 94337220 | 94337220 | C | T | Silent | 2 | |
PIWIL4 | LIHC | chr11 | 94352999 | 94352999 | C | A | Missense_Mutation | 2 | |
PIWIL4 | STAD | chr11 | 94353244 | 94353244 | C | T | Silent | p.N792N | 2 |
PIWIL4 | SKCM | chr11 | 94353008 | 94353008 | C | T | Missense_Mutation | p.P751S | 2 |
PIWIL4 | UCEC | chr11 | 94353164 | 94353164 | T | C | Missense_Mutation | p.Y766H | 2 |
PIWIL4 | COAD | chr11 | 94322352 | 94322352 | A | T | Missense_Mutation | p.Q327L | 2 |
PIWIL4 | LIHC | chr11 | 94354059 | 94354059 | A | T | Silent | 2 | |
PIWIL4 | SARC | chr11 | 94351157 | 94351157 | G | T | Missense_Mutation | 2 | |
PIWIL4 | STAD | chr11 | 94330984 | 94330984 | G | A | Missense_Mutation | p.R428H | 2 |
PIWIL4 | LIHC | chr11 | 94353004 | 94353004 | C | - | Frame_Shift_Del | p.N749fs | 2 |
PIWIL4 | SKCM | chr11 | 94340698 | 94340698 | C | T | Missense_Mutation | p.L578F | 2 |
PIWIL4 | UCEC | chr11 | 94320235 | 94320235 | T | C | Missense_Mutation | p.F246L | 2 |
PIWIL4 | COAD | chr11 | 94322353 | 94322353 | G | A | Silent | p.Q327Q | 2 |
PIWIL4 | LIHC | chr11 | 94354053 | 94354053 | T | G | Missense_Mutation | 2 | |
PIWIL4 | SARC | chr11 | 94301961 | 94301961 | G | T | Missense_Mutation | 2 | |
PIWIL4 | STAD | chr11 | 94320238 | 94320238 | G | A | Missense_Mutation | p.A247T | 2 |
PIWIL4 | SKCM | chr11 | 94300761 | 94300761 | C | T | Missense_Mutation | p.A26V | 2 |
PIWIL4 | UCEC | chr11 | 94322298 | 94322298 | G | T | Missense_Mutation | p.R309I | 2 |
PIWIL4 | STAD | chr11 | 94316686 | 94316686 | C | T | Missense_Mutation | 2 | |
PIWIL4 | BLCA | chr11 | 94316737 | 94316737 | T | C | Splice_Site | 2 | |
PIWIL4 | LIHC | chr11 | 94354053 | 94354053 | T | G | Missense_Mutation | p.S818R | 2 |
PIWIL4 | STAD | chr11 | 94326704 | 94326704 | G | A | Silent | p.S349S | 2 |
PIWIL4 | UCEC | chr11 | 94326748 | 94326748 | G | T | Missense_Mutation | p.R364I | 2 |
PIWIL4 | BRCA | chr11 | 94322383 | 94322383 | G | T | Silent | p.V337 | 2 |
PIWIL4 | CESC | chr11 | 94316638 | 94316638 | C | G | Missense_Mutation | 2 | |
PIWIL4 | BLCA | chr11 | 94316728 | 94316728 | T | C | Missense_Mutation | p.F210L | 1 |
PIWIL4 | COAD | chr11 | 94328518 | 94328518 | T | G | Silent | p.A398A | 1 |
PIWIL4 | HNSC | chr11 | 94340739 | 94340739 | C | T | Silent | p.I591I | 1 |
PIWIL4 | LIHC | chr11 | 94316706 | 94316706 | C | A | Nonsense_Mutation | p.C202X | 1 |
PIWIL4 | SARC | chr11 | 94337172 | 94337172 | G | T | Missense_Mutation | p.A530S | 1 |
PIWIL4 | KIRP | chr11 | 94301931 | 94301931 | C | A | Silent | 1 | |
PIWIL4 | LIHC | chr11 | 94340653 | 94340653 | A | - | Frame_Shift_Del | p.K564fs | 1 |
PIWIL4 | LUAD | chr11 | 94316616 | 94316616 | C | A | Silent | p.V172V | 1 |
PIWIL4 | BLCA | chr11 | 94340677 | 94340677 | C | T | Missense_Mutation | 1 | |
PIWIL4 | HNSC | chr11 | 94331061 | 94331061 | A | C | Missense_Mutation | p.I454L | 1 |
PIWIL4 | LIHC | chr11 | 94308255 | 94308255 | G | C | Missense_Mutation | p.C86S | 1 |
PIWIL4 | STAD | chr11 | 94335140 | 94335141 | - | A | Frame_Shift_Ins | p.N521fs | 1 |
PIWIL4 | HNSC | chr11 | 94340739 | 94340739 | C | T | Silent | 1 | |
PIWIL4 | KIRP | chr11 | 94278671 | 94278671 | C | A | Missense_Mutation | 1 | |
PIWIL4 | LIHC | chr11 | 94316706 | 94316706 | C | A | Nonsense_Mutation | 1 | |
PIWIL4 | LIHC | chr11 | 94354095 | 94354095 | G | T | Silent | 1 | |
PIWIL4 | LUAD | chr11 | 94316682 | 94316682 | G | A | Silent | p.E194E | 1 |
PIWIL4 | CESC | chr11 | 94341823 | 94341823 | C | T | Silent | p.C638C | 1 |
PIWIL4 | COAD | chr11 | 94353309 | 94353309 | C | T | Missense_Mutation | p.P814L | 1 |
PIWIL4 | KICH | chr11 | 94353042 | 94353042 | G | A | Missense_Mutation | 1 | |
PIWIL4 | SKCM | chr11 | 94322335 | 94322335 | G | A | Silent | p.K321K | 1 |
PIWIL4 | THYM | chr11 | 94337149 | 94337149 | G | A | Splice_Site | . | 1 |
PIWIL4 | BRCA | chr11 | 94318660 | 94318660 | C | T | Missense_Mutation | p.P229S | 1 |
PIWIL4 | HNSC | chr11 | 94331061 | 94331061 | A | C | Missense_Mutation | 1 | |
PIWIL4 | KIRP | chr11 | 94340804 | 94340804 | C | A | Missense_Mutation | 1 | |
PIWIL4 | LUAD | chr11 | 94351135 | 94351135 | G | T | Missense_Mutation | p.W677L | 1 |
PIWIL4 | LIHC | chr11 | 94318691 | 94318691 | A | G | Missense_Mutation | 1 | |
PIWIL4 | LUSC | chr11 | 94300723 | 94300723 | C | T | Silent | p.A13A | 1 |
PIWIL4 | CESC | chr11 | 94337148 | 94337148 | A | G | Splice_Site | e13-2 | 1 |
PIWIL4 | THYM | chr11 | 94316713 | 94316713 | G | T | Missense_Mutation | p.V205F | 1 |
PIWIL4 | SKCM | chr11 | 94353025 | 94353025 | G | A | Silent | p.V756V | 1 |
PIWIL4 | KIRP | chr11 | 94340737 | 94340737 | A | G | Missense_Mutation | 1 | |
PIWIL4 | LUAD | chr11 | 94301943 | 94301943 | C | T | Silent | p.G45G | 1 |
PIWIL4 | CESC | chr11 | 94316638 | 94316638 | C | G | Missense_Mutation | p.Q180E | 1 |
PIWIL4 | LIHC | chr11 | 94351263 | 94351263 | T | C | Missense_Mutation | 1 | |
PIWIL4 | MESO | chr11 | 94349713 | 94349713 | G | T | Missense_Mutation | 1 | |
PIWIL4 | BLCA | chr11 | 94328539 | 94328539 | C | G | Silent | 1 | |
PIWIL4 | BLCA | chr11 | 94352998 | 94352998 | A | T | Silent | p.V747V | 1 |
PIWIL4 | DLBC | chr11 | 94320300 | 94320300 | C | T | Silent | p.V267V | 1 |
PIWIL4 | LIHC | chr11 | 94335097 | 94335097 | T | C | Missense_Mutation | p.L506S | 1 |
PIWIL4 | SKCM | chr11 | 94318623 | 94318623 | G | C | Missense_Mutation | p.K216N | 1 |
PIWIL4 | BLCA | chr11 | 94352998 | 94352998 | A | T | Silent | 1 | |
PIWIL4 | CESC | chr11 | 94341823 | 94341823 | C | T | Silent | p.C638 | 1 |
PIWIL4 | PAAD | chr11 | 94351179 | 94351179 | C | A | Missense_Mutation | 1 | |
PIWIL4 | READ | chr11 | 94354117 | 94354117 | G | T | Nonsense_Mutation | p.E840X | 1 |
PIWIL4 | ESCA | chr11 | 94352930 | 94352930 | A | T | Nonsense_Mutation | p.R725X | 1 |
PIWIL4 | KIRP | chr11 | 94300728 | 94300728 | G | A | Missense_Mutation | p.S15N | 1 |
PIWIL4 | SKCM | chr11 | 94353174 | 94353174 | A | G | Missense_Mutation | p.Y769C | 1 |
PIWIL4 | CESC | chr11 | 94322358 | 94322358 | G | A | Missense_Mutation | 1 | |
PIWIL4 | LUAD | chr11 | 94341824 | 94341824 | G | T | Missense_Mutation | p.V639L | 1 |
PIWIL4 | BLCA | chr11 | 94310554 | 94310554 | A | G | Missense_Mutation | 1 | |
PIWIL4 | COAD | chr11 | 94320237 | 94320237 | T | C | Silent | p.F246F | 1 |
PIWIL4 | READ | chr11 | 94331025 | 94331025 | A | G | Missense_Mutation | p.I442V | 1 |
PIWIL4 | BLCA | chr11 | 94353178 | 94353178 | G | A | Silent | p.L770L | 1 |
PIWIL4 | GBM | chr11 | 94328516 | 94328516 | G | A | Missense_Mutation | p.A398T | 1 |
PIWIL4 | LIHC | chr11 | 94316706 | 94316706 | C | A | Nonsense_Mutation | p.C202* | 1 |
PIWIL4 | SKCM | chr11 | 94326773 | 94326773 | C | T | Silent | p.L372L | 1 |
PIWIL4 | CESC | chr11 | 94326710 | 94326710 | G | A | Silent | 1 | |
PIWIL4 | BLCA | chr11 | 94354146 | 94354146 | C | G | Silent | 1 | |
PIWIL4 | COAD | chr11 | 94320250 | 94320250 | T | C | Missense_Mutation | p.S251P | 1 |
PIWIL4 | SARC | chr11 | 94337172 | 94337172 | G | T | Missense_Mutation | 1 | |
PIWIL4 | BLCA | chr11 | 94301962 | 94301962 | A | G | Missense_Mutation | p.I52V | 1 |
PIWIL4 | GBM | chr11 | 94335056 | 94335056 | C | T | Silent | p.S492S | 1 |
PIWIL4 | LIHC | chr11 | 94352999 | 94352999 | C | A | Missense_Mutation | p.Q748K | 1 |
PIWIL4 | LIHC | chr11 | 94322348 | 94322348 | T | C | Missense_Mutation | 1 | |
PIWIL4 | LUAD | chr11 | 94320403 | 94320403 | G | A | Missense_Mutation | p.V302I | 1 |
PIWIL4 | SKCM | chr11 | 94316730 | 94316730 | C | T | Silent | p.F210F | 1 |
PIWIL4 | ACC | chr11 | 94340769 | 94340769 | C | T | Silent | p.C601C | 1 |
PIWIL4 | CESC | chr11 | 94341823 | 94341823 | C | T | Silent | 1 | |
PIWIL4 | BLCA | chr11 | 94353178 | 94353178 | G | A | Silent | 1 | |
PIWIL4 | PAAD | chr11 | 94278557 | 94278557 | G | T | Missense_Mutation | 1 | |
PIWIL4 | BLCA | chr11 | 94331053 | 94331053 | C | T | Missense_Mutation | p.S451L | 1 |
PIWIL4 | GBM | chr11 | 94335056 | 94335056 | C | T | Silent | 1 | |
PIWIL4 | KIRP | chr11 | 94300709 | 94300709 | G | C | Missense_Mutation | p.A9P | 1 |
PIWIL4 | LIHC | chr11 | 94310600 | 94310600 | A | G | Missense_Mutation | 1 | |
PIWIL4 | LUAD | chr11 | 94310469 | 94310469 | G | T | Silent | p.L108L | 1 |
PIWIL4 | STAD | chr11 | 94335140 | 94335141 | - | - | Frame_Shift_Ins | 1 | |
PIWIL4 | UCS | chr11 | 94310616 | 94310616 | C | T | Silent | 1 | |
PIWIL4 | BLCA | chr11 | 94316728 | 94316728 | T | C | Missense_Mutation | 1 | |
PIWIL4 | BLCA | chr11 | 94301962 | 94301962 | A | G | Missense_Mutation | 1 | |
PIWIL4 | BLCA | chr11 | 94316613 | 94316613 | G | A | Splice_Site | p.V172_splice | 1 |
PIWIL4 | HNSC | chr11 | 94349700 | 94349700 | T | C | Missense_Mutation | 1 | |
PIWIL4 | KIRP | chr11 | 94278514 | 94278514 | C | A | Silent | 1 | |
PIWIL4 | LIHC | chr11 | 94301938 | 94301938 | A | - | Frame_Shift_Del | p.N44fs | 1 |
PIWIL4 | LUAD | chr11 | 94308235 | 94308235 | C | G | Missense_Mutation | p.D79E | 1 |
PIWIL4 | UCS | chr11 | 94318621 | 94318621 | A | C | Missense_Mutation | 1 | |
PIWIL4 | BLCA | chr11 | 94331053 | 94331053 | C | T | Missense_Mutation | 1 | |
PIWIL4 | COAD | chr11 | 94326765 | 94326765 | G | C | Missense_Mutation | p.A370P | 1 |
PIWIL4 | SARC | chr11 | 94326770 | 94326770 | G | T | Missense_Mutation | 1 | |
PIWIL4 | SKCM | chr11 | 94340751 | 94340751 | C | T | Silent | p.I595I | 1 |
PIWIL4 | HNSC | chr11 | 94341767 | 94341767 | G | A | Missense_Mutation | 1 | |
PIWIL4 | KIRP | chr11 | 94341805 | 94341805 | C | T | Silent | 1 | |
PIWIL4 | LIHC | chr11 | 94353014 | 94353014 | G | - | Frame_Shift_Del | p.G753fs | 1 |
PIWIL4 | LIHC | chr11 | 94320331 | 94320331 | A | G | Missense_Mutation | 1 | |
PIWIL4 | LUAD | chr11 | 94330997 | 94330997 | G | T | Missense_Mutation | p.E432D | 1 |
PIWIL4 | STAD | chr11 | 94335140 | 94335141 | - | A | Frame_Shift_Ins | p.P520fs | 1 |
PIWIL4 | UCS | chr11 | 94322371 | 94322371 | G | T | Missense_Mutation | 1 | |
PIWIL4 | BLCA | chr11 | 94335120 | 94335120 | G | A | Missense_Mutation | 1 |
Copy number variation (CNV) of PIWIL4 * Click on the image to open the original image in a new window. |
Fusion gene breakpoints (product of the structural variants (SVs)) across PIWIL4 * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion genes with this translation factor from FusionGDB2.0. |
FusionGDB2 ID | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
83013 | SARC | TCGA-KD-A5QS-01A | AMOTL1 | chr11 | 94501726 | + | PIWIL4 | chr11 | 94340605 | + |
86450 | SARC | TCGA-DX-A3LT-01A | PIWIL4 | chr11 | 94301974 | - | THRSP | chr11 | 77778705 | + |
86450 | SARC | TCGA-DX-A3LT-01A | PIWIL4 | chr11 | 94310658 | + | THRSP | chr11 | 77778705 | + |
83013 | SKCM | TCGA-D9-A4Z3-01A | SLC35F2 | chr11 | 107729384 | - | PIWIL4 | chr11 | 94340605 | + |
Top |
|
Kaplan-Meier plots with logrank tests of overall survival (OS) |
Cancer type | Translation factor | Coefficent | Hazard ratio | Wald test pval | Likelihool ratio pval | Logrank test pval | # samples |
Top |
|
Differential gene expression between female and male. (Wilcoxon test, pval<0.05) |
Cancer type | Translation factor | pval | adj.p |
GBM | PIWIL4 | 0.001207928745164 | 0.034 |
BRCA | PIWIL4 | 0.00255190037624743 | 0.069 |
KIRP | PIWIL4 | 0.00629838154428849 | 0.16 |
COAD | PIWIL4 | 0.0113366466888088 | 0.28 |
HNSC | PIWIL4 | 0.0148675090163444 | 0.36 |
KIRC | PIWIL4 | 0.0408431304316564 | 0.94 |
Top |
|
Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05) |
Cancer type | Translation factor | pval | adj.p |
LIHC | PIWIL4 | 4.23857974251119e-07 | 1.4e-05 |
LUSC | PIWIL4 | 0.00743558464405802 | 0.22 |
THCA | PIWIL4 | 0.00147151195273606 | 0.044 |
KIRC | PIWIL4 | 0.0309825161046911 | 0.84 |
BRCA | PIWIL4 | 2.43365575445902e-08 | 8e-07 |
PRAD | PIWIL4 | 0.00928137847023606 | 0.26 |
ESCA | PIWIL4 | 3.29902981173036e-06 | 1e-04 |
Top |
|
Drugs targeting genes involved in this translation factor. (DrugBank Version 5.1.8 2021-05-08) |
UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
|
Diseases associated with this translation factor. (DisGeNet 4.0) |
Disease ID | Disease Name | # PubMeds | Disease source |
C0028960 | Oligospermia | 1 | CTD_human |