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Translation Factor: RPL36 (NCBI Gene ID:25873) |
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Gene Summary |
Gene Information | Gene Name: RPL36 | Gene ID: 25873 | Gene Symbol | RPL36 | Gene ID | 25873 |
Gene Name | ribosomal protein L36 | |
Synonyms | L36 | |
Cytomap | 19p13.3 | |
Type of Gene | protein-coding | |
Description | 60S ribosomal protein L36large ribosomal subunit protein eL36 | |
Modification date | 20200313 | |
UniProtAcc | Q9Y3U8 |
Child GO biological process term(s) under GO:0006412 |
GO ID | GO term |
GO:0005840 | Ribosome |
GO:0002181 | Cytoplasmic translation |
GO:0006412 | Translation |
Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | RPL36 | GO:0002181 | cytoplasmic translation | 25957688 |
Inferred gene age of translation factor. |
Gene | Inferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25 |
RPL36 | >1119.25 |
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We searched PubMed using 'RPL36[title] AND translation [title] AND human.' |
Gene | Title | PMID |
RPL36 | . | . |
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Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. For more annotations, please visit our ExonSkipDB. |
Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | ORF |
ENST00000347512 | 5690516 | 5690611 | 5CDS-5UTR |
ENST00000577222 | 5690516 | 5690611 | 5CDS-5UTR |
ENST00000347512 | 5691329 | 5691464 | In-frame |
ENST00000394580 | 5691329 | 5691464 | In-frame |
ENST00000577222 | 5691329 | 5691464 | In-frame |
ENST00000579649 | 5691329 | 5691464 | In-frame |
Exon skipping position in the amino acid sequence. |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | Len(transcript seq) | Exon skip start (mRNA) | Exon Skip end (mRNA) | Len(amino acid seq) | Exon skip start (AA) | Exon Skip end (AA) |
ENST00000579649 | 5691329 | 5691464 | 466 | 179 | 313 | 105 | 31 | 76 |
ENST00000394580 | 5691329 | 5691464 | 573 | 286 | 420 | 105 | 31 | 76 |
ENST00000347512 | 5691329 | 5691464 | 724 | 228 | 362 | 105 | 31 | 76 |
ENST00000577222 | 5691329 | 5691464 | 891 | 638 | 772 | 105 | 31 | 76 |
Potentially (partially) lost protein functional features of UniProt. |
UniProtAcc | Exon skip start (AA) | Exon Skip end (AA) | Function feature start (AA) | Function feature end (AA) | Functional feature type | Functional feature desc. |
Q9Y3U8 | 31 | 76 | 2 | 105 | Chain | ID=PRO_0000195007;Note=60S ribosomal protein L36 |
Q9Y3U8 | 31 | 76 | 2 | 105 | Chain | ID=PRO_0000195007;Note=60S ribosomal protein L36 |
Q9Y3U8 | 31 | 76 | 2 | 105 | Chain | ID=PRO_0000195007;Note=60S ribosomal protein L36 |
Q9Y3U8 | 31 | 76 | 2 | 105 | Chain | ID=PRO_0000195007;Note=60S ribosomal protein L36 |
Q9Y3U8 | 31 | 76 | 62 | 62 | Modified residue | Note=N6-acetyllysine;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:19608861;Dbxref=PMID:19608861 |
Q9Y3U8 | 31 | 76 | 62 | 62 | Modified residue | Note=N6-acetyllysine;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:19608861;Dbxref=PMID:19608861 |
Q9Y3U8 | 31 | 76 | 62 | 62 | Modified residue | Note=N6-acetyllysine;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:19608861;Dbxref=PMID:19608861 |
Q9Y3U8 | 31 | 76 | 62 | 62 | Modified residue | Note=N6-acetyllysine;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:19608861;Dbxref=PMID:19608861 |
Q9Y3U8 | 31 | 76 | 67 | 67 | Natural variant | ID=VAR_051804;Note=K->E;Dbxref=dbSNP:rs11556110 |
Q9Y3U8 | 31 | 76 | 67 | 67 | Natural variant | ID=VAR_051804;Note=K->E;Dbxref=dbSNP:rs11556110 |
Q9Y3U8 | 31 | 76 | 67 | 67 | Natural variant | ID=VAR_051804;Note=K->E;Dbxref=dbSNP:rs11556110 |
Q9Y3U8 | 31 | 76 | 67 | 67 | Natural variant | ID=VAR_051804;Note=K->E;Dbxref=dbSNP:rs11556110 |
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Gene expression level across TCGA pancancer |
Gene expression level across GTEx pantissue |
Expression level of gene isoforms across TCGA pancancer |
Expression level of gene isoforms across GTEx pantissue |
Cancer(tissue) type-specific expression level of Translation factor using z-score distriution |
Differential expression between tumor and matched normal (in the cancer types with more than 10 matched samples) |
Cancer type | Translation factor | FC | adj.pval |
LUSC | RPL36 | -2.06002981714578 | 0.000251881966259792 |
PRAD | RPL36 | 2.08473274747086 | 0.000648342999076925 |
KICH | RPL36 | -3.14173884697974 | 0.00612920522689819 |
HNSC | RPL36 | -3.50943950068052 | 0.0448960527075997 |
KIRC | RPL36 | -1.94758136221802 | 1.67069036077484e-10 |
KIRP | RPL36 | -1.416442430054 | 2.31293961405754e-06 |
COAD | RPL36 | 3.04198777530358 | 5.1647424697876e-05 |
THCA | RPL36 | -3.58350995246394 | 5.65302269188786e-05 |
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Translation factor expression regulation through miRNA binding |
Cancer type | Gene | miRNA | TargetScan binding score (Context++ score percentile) | Coefficient | Pvalue |
Translation factor expression regulation through methylation in the promoter of Translation factor |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
LAML | RPL36 | 3 | 2 | 0.00809421030344664 | 0.619725965447155 | 0.577743191964286 | 0.609673210034574 | 0.72755946874551 |
SARC | RPL36 | 3 | 2 | 0.00133440132525964 | 0.620817692307692 | 0.520557676861291 | -0.6048414241116 | -0.195308693188178 |
Translation factor expression regulation through methylation in the gene body of Translation factor (positive regulation) |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
ACC | RPL36 | 2 | 3 | 0.0089858844274834 | 0.525201278772379 | 0.645467379679144 | -0.455912085023558 | -1.76464014826509 |
Translation factor expression regulation through copy number variation of Translation factor |
Cancer type | Gene | Coefficient | Pvalue |
ESCA | RPL36 | 0.026727157 | 0.00444972 |
KIRC | RPL36 | -0.045380786 | 0.010785928 |
DLBC | RPL36 | -0.013322312 | 0.047673327 |
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Strongly correlated genes belong to cellular important gene groups with RPL36 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green) |
Cancer type | Gene group | Translation factor | Correlated gene | Coefficient | Pvalue |
CHOL | Cell metabolism gene | RPL36 | SNRPD2 | 0.852556287 | 1.07E-13 |
CHOL | Cell metabolism gene | RPL36 | PFDN5 | 0.864852448 | 1.88E-14 |
CHOL | CGC | RPL36 | NACA | 0.8539359 | 8.90E-14 |
CHOL | Epifactor | RPL36 | FBL | 0.83638436 | 8.49E-13 |
CHOL | TSG | RPL36 | GLTSCR2 | 0.813586227 | 1.10E-11 |
CHOL | TSG | RPL36 | GNB2L1 | 0.827211643 | 2.49E-12 |
DLBC | Cell metabolism gene | RPL36 | PGLS | 0.804016027 | 5.93E-12 |
DLBC | Cell metabolism gene | RPL36 | DGUOK | 0.805343117 | 5.15E-12 |
DLBC | Cell metabolism gene | RPL36 | PSMD13 | 0.80918643 | 3.40E-12 |
DLBC | Cell metabolism gene | RPL36 | TOMM7 | 0.812242838 | 2.43E-12 |
DLBC | Cell metabolism gene | RPL36 | PTDSS2 | 0.816061936 | 1.58E-12 |
DLBC | Cell metabolism gene | RPL36 | PFDN4 | 0.816528163 | 1.50E-12 |
DLBC | Cell metabolism gene | RPL36 | POLR2J | 0.817609504 | 1.33E-12 |
DLBC | Cell metabolism gene | RPL36 | POLR2I | 0.819392952 | 1.08E-12 |
DLBC | Cell metabolism gene | RPL36 | POLR2L | 0.81960782 | 1.05E-12 |
DLBC | Cell metabolism gene | RPL36 | PSMC5 | 0.822320477 | 7.67E-13 |
DLBC | Cell metabolism gene | RPL36 | TIMM13 | 0.823940055 | 6.33E-13 |
DLBC | Cell metabolism gene | RPL36 | PSMB3 | 0.827787578 | 3.98E-13 |
DLBC | Cell metabolism gene | RPL36 | POLR2F | 0.830347952 | 2.90E-13 |
DLBC | Cell metabolism gene | RPL36 | GEMIN7 | 0.835876336 | 1.44E-13 |
DLBC | Cell metabolism gene | RPL36 | TOMM22 | 0.842791073 | 5.80E-14 |
DLBC | Cell metabolism gene | RPL36 | GFER | 0.854062164 | 1.19E-14 |
DLBC | Cell metabolism gene | RPL36 | TIMM9 | 0.864270233 | 2.52E-15 |
DLBC | Cell metabolism gene | RPL36 | NME2 | 0.876672829 | 3.20E-16 |
DLBC | Cell metabolism gene | RPL36 | SNRPD2 | 0.898787935 | 4.34E-18 |
DLBC | Cell metabolism gene | RPL36 | PFDN5 | 0.908172905 | 5.14E-19 |
DLBC | Cell metabolism gene | RPL36 | FAU | 0.916534486 | 6.26E-20 |
DLBC | CGC | RPL36 | HRAS | 0.80778897 | 3.96E-12 |
DLBC | CGC | RPL36 | NACA | 0.861028287 | 4.19E-15 |
DLBC | Epifactor | RPL36 | DMAP1 | 0.812633686 | 2.33E-12 |
DLBC | Epifactor | RPL36 | ZNHIT1 | 0.813086309 | 2.21E-12 |
DLBC | Epifactor | RPL36 | FBL | 0.830099898 | 3.00E-13 |
DLBC | Epifactor | RPL36 | TAF10 | 0.838259478 | 1.06E-13 |
DLBC | IUPHAR | RPL36 | HRAS | 0.80778897 | 3.96E-12 |
DLBC | TF | RPL36 | REXO4 | 0.809511385 | 3.28E-12 |
DLBC | TF | RPL36 | ZNF581 | 0.809519111 | 3.28E-12 |
DLBC | TF | RPL36 | THAP3 | 0.826600981 | 4.60E-13 |
DLBC | TF | RPL36 | ZNF444 | 0.834181666 | 1.79E-13 |
DLBC | TF | RPL36 | THAP7 | 0.834915578 | 1.63E-13 |
DLBC | TF | RPL36 | THAP4 | 0.844949203 | 4.33E-14 |
DLBC | TF | RPL36 | NME2 | 0.876672829 | 3.20E-16 |
DLBC | TSG | RPL36 | GLTSCR2 | 0.813249011 | 2.17E-12 |
DLBC | TSG | RPL36 | TSSC4 | 0.823138226 | 6.97E-13 |
DLBC | TSG | RPL36 | PARK7 | 0.826306989 | 4.77E-13 |
DLBC | TSG | RPL36 | GADD45GIP1 | 0.886436726 | 5.35E-17 |
DLBC | TSG | RPL36 | GNB2L1 | 0.906918117 | 6.92E-19 |
GBM | Cell metabolism gene | RPL36 | SSR2 | 0.804831422 | 2.30E-40 |
GBM | Cell metabolism gene | RPL36 | GEMIN7 | 0.816028103 | 2.53E-42 |
GBM | Cell metabolism gene | RPL36 | PFDN5 | 0.824775588 | 5.98E-44 |
GBM | Cell metabolism gene | RPL36 | FAU | 0.835577028 | 4.37E-46 |
GBM | Cell metabolism gene | RPL36 | SNRPD2 | 0.844484171 | 5.74E-48 |
GBM | TSG | RPL36 | GADD45GIP1 | 0.857461847 | 6.23E-51 |
KICH | Cell metabolism gene | RPL36 | SNRPB | 0.832757663 | 1.41E-24 |
KICH | Cell metabolism gene | RPL36 | SNRPD2 | 0.854002411 | 5.46E-27 |
KICH | TF | RPL36 | ZNF581 | 0.820929386 | 2.25E-23 |
KICH | TSG | RPL36 | GLTSCR2 | 0.800249338 | 1.80E-21 |
KIRP | Cell metabolism gene | RPL36 | POLR2I | 0.803791478 | 2.20E-74 |
KIRP | Cell metabolism gene | RPL36 | PGLS | 0.805889893 | 4.70E-75 |
KIRP | Cell metabolism gene | RPL36 | SNRPD2 | 0.87964957 | 1.27E-105 |
KIRP | Cell metabolism gene | RPL36 | FAU | 0.8993652 | 2.25E-117 |
KIRP | Epifactor | RPL36 | FBL | 0.815175083 | 4.05E-78 |
KIRP | TSG | RPL36 | GADD45GIP1 | 0.826544857 | 4.09E-82 |
LGG | Cell metabolism gene | RPL36 | FAU | 0.837150908 | 1.83E-140 |
LIHC | Cell metabolism gene | RPL36 | PFDN5 | 0.829769554 | 1.09E-108 |
LIHC | TSG | RPL36 | GADD45GIP1 | 0.845933492 | 5.16E-117 |
MESO | Cell metabolism gene | RPL36 | FAU | 0.803821561 | 7.15E-21 |
PAAD | Cell metabolism gene | RPL36 | FAU | 0.854188498 | 2.70E-53 |
PCPG | Cell metabolism gene | RPL36 | PFDN5 | 0.824559544 | 1.23E-47 |
PCPG | TSG | RPL36 | GNB2L1 | 0.81857202 | 2.04E-46 |
PRAD | Cell metabolism gene | RPL36 | POLR2H | 0.810027792 | 3.89E-129 |
PRAD | Cell metabolism gene | RPL36 | TIMM9 | 0.816881879 | 4.61E-133 |
PRAD | Cell metabolism gene | RPL36 | TOMM7 | 0.824976196 | 6.44E-138 |
PRAD | Cell metabolism gene | RPL36 | PGLS | 0.825886422 | 1.77E-138 |
PRAD | Cell metabolism gene | RPL36 | NME2 | 0.829891245 | 5.45E-141 |
PRAD | Cell metabolism gene | RPL36 | POLR2F | 0.83248798 | 1.18E-142 |
PRAD | Cell metabolism gene | RPL36 | POLR2I | 0.836206321 | 4.38E-145 |
PRAD | Cell metabolism gene | RPL36 | PSMB7 | 0.848155165 | 2.47E-153 |
PRAD | Cell metabolism gene | RPL36 | TIMM13 | 0.850515493 | 4.79E-155 |
PRAD | Cell metabolism gene | RPL36 | FAU | 0.851959106 | 4.14E-156 |
PRAD | Cell metabolism gene | RPL36 | SNRPD2 | 0.860012095 | 2.98E-162 |
PRAD | CGC | RPL36 | NACA | 0.818258566 | 7.16E-134 |
PRAD | Epifactor | RPL36 | FBL | 0.864192021 | 1.35E-165 |
PRAD | TF | RPL36 | NME2 | 0.829891245 | 5.45E-141 |
PRAD | TF | RPL36 | ZNF581 | 0.835203969 | 2.01E-144 |
PRAD | TF | RPL36 | ZNF524 | 0.849475556 | 2.74E-154 |
PRAD | TSG | RPL36 | GADD45GIP1 | 0.800289108 | 7.99E-124 |
PRAD | TSG | RPL36 | GAS5 | 0.81325832 | 5.75E-131 |
PRAD | TSG | RPL36 | GNB2L1 | 0.864054405 | 1.75E-165 |
READ | TSG | RPL36 | GADD45GIP1 | 0.81391545 | 4.91E-26 |
TGCT | Cell metabolism gene | RPL36 | POLR2I | 0.80109368 | 3.75E-36 |
TGCT | Cell metabolism gene | RPL36 | SNRPD2 | 0.830055747 | 6.77E-41 |
THCA | Cell metabolism gene | RPL36 | PFDN5 | 0.800826186 | 5.13E-129 |
THCA | Cell metabolism gene | RPL36 | POLR2I | 0.819622842 | 5.20E-140 |
THCA | Cell metabolism gene | RPL36 | GPX4 | 0.83994238 | 1.94E-153 |
THCA | Cell metabolism gene | RPL36 | FAU | 0.851906503 | 2.93E-162 |
THCA | Cell metabolism gene | RPL36 | SNRPD2 | 0.877525157 | 4.42E-184 |
THCA | Epifactor | RPL36 | C17orf49 | 0.8147221 | 5.05E-137 |
THCA | Epifactor | RPL36 | TAF10 | 0.817833849 | 6.56E-139 |
THCA | IUPHAR | RPL36 | CSNK2B | 0.812636979 | 8.85E-136 |
THCA | TF | RPL36 | ZNF524 | 0.831404493 | 1.41E-147 |
THCA | TSG | RPL36 | GNB2L1 | 0.84424925 | 1.58E-156 |
THYM | Cell metabolism gene | RPL36 | GUK1 | 0.802240954 | 1.18E-28 |
THYM | Cell metabolism gene | RPL36 | TOMM22 | 0.804488874 | 6.39E-29 |
THYM | Cell metabolism gene | RPL36 | MMAB | 0.806159977 | 4.03E-29 |
THYM | Cell metabolism gene | RPL36 | ATP5G1 | 0.80661535 | 3.55E-29 |
THYM | Cell metabolism gene | RPL36 | PPCDC | 0.807777008 | 2.57E-29 |
THYM | Cell metabolism gene | RPL36 | SSR4 | 0.808381403 | 2.17E-29 |
THYM | Cell metabolism gene | RPL36 | PMPCA | 0.808788081 | 1.93E-29 |
THYM | Cell metabolism gene | RPL36 | POLR2J | 0.809293372 | 1.67E-29 |
THYM | Cell metabolism gene | RPL36 | ALG3 | 0.809880181 | 1.42E-29 |
THYM | Cell metabolism gene | RPL36 | NANS | 0.810801286 | 1.09E-29 |
THYM | Cell metabolism gene | RPL36 | PSMB7 | 0.81176998 | 8.27E-30 |
THYM | Cell metabolism gene | RPL36 | PSME2 | 0.811965048 | 7.82E-30 |
THYM | Cell metabolism gene | RPL36 | PSMD4 | 0.819911101 | 7.55E-31 |
THYM | Cell metabolism gene | RPL36 | PSMB3 | 0.822089835 | 3.90E-31 |
THYM | Cell metabolism gene | RPL36 | GEMIN7 | 0.822558005 | 3.38E-31 |
THYM | Cell metabolism gene | RPL36 | MIF | 0.823214745 | 2.76E-31 |
THYM | Cell metabolism gene | RPL36 | ACOT8 | 0.823485672 | 2.54E-31 |
THYM | Cell metabolism gene | RPL36 | POLE4 | 0.825043852 | 1.57E-31 |
THYM | Cell metabolism gene | RPL36 | TIMM10 | 0.825949442 | 1.18E-31 |
THYM | Cell metabolism gene | RPL36 | HMBS | 0.826858213 | 8.89E-32 |
THYM | Cell metabolism gene | RPL36 | IMPDH2 | 0.827285828 | 7.77E-32 |
THYM | Cell metabolism gene | RPL36 | GFER | 0.827583649 | 7.07E-32 |
THYM | Cell metabolism gene | RPL36 | PSMC5 | 0.827680218 | 6.86E-32 |
THYM | Cell metabolism gene | RPL36 | MPST | 0.828682438 | 4.99E-32 |
THYM | Cell metabolism gene | RPL36 | APRT | 0.829244677 | 4.17E-32 |
THYM | Cell metabolism gene | RPL36 | PTGES2 | 0.832028617 | 1.70E-32 |
THYM | Cell metabolism gene | RPL36 | ITPA | 0.832101902 | 1.66E-32 |
THYM | Cell metabolism gene | RPL36 | PHPT1 | 0.834192089 | 8.35E-33 |
THYM | Cell metabolism gene | RPL36 | EXOSC5 | 0.836757645 | 3.55E-33 |
THYM | Cell metabolism gene | RPL36 | LCMT1 | 0.837061517 | 3.21E-33 |
THYM | Cell metabolism gene | RPL36 | GSTP1 | 0.837831057 | 2.47E-33 |
THYM | Cell metabolism gene | RPL36 | TIMM8B | 0.837966529 | 2.36E-33 |
THYM | Cell metabolism gene | RPL36 | NME2 | 0.837996735 | 2.34E-33 |
THYM | Cell metabolism gene | RPL36 | POLR2H | 0.84189065 | 6.14E-34 |
THYM | Cell metabolism gene | RPL36 | TOMM7 | 0.847526426 | 8.30E-35 |
THYM | Cell metabolism gene | RPL36 | MTX1 | 0.848337431 | 6.18E-35 |
THYM | Cell metabolism gene | RPL36 | GMPPA | 0.854523401 | 6.17E-36 |
THYM | Cell metabolism gene | RPL36 | POLR2F | 0.855516021 | 4.22E-36 |
THYM | Cell metabolism gene | RPL36 | DPM3 | 0.856065801 | 3.41E-36 |
THYM | Cell metabolism gene | RPL36 | SNRPD2 | 0.856449346 | 2.94E-36 |
THYM | Cell metabolism gene | RPL36 | SLC27A5 | 0.858178049 | 1.50E-36 |
THYM | Cell metabolism gene | RPL36 | TIMM13 | 0.859458917 | 9.06E-37 |
THYM | Cell metabolism gene | RPL36 | SSR2 | 0.859668994 | 8.34E-37 |
THYM | Cell metabolism gene | RPL36 | TIMM50 | 0.868091567 | 2.64E-38 |
THYM | Cell metabolism gene | RPL36 | EXOSC4 | 0.868394758 | 2.32E-38 |
THYM | Cell metabolism gene | RPL36 | DPM2 | 0.86840691 | 2.31E-38 |
THYM | Cell metabolism gene | RPL36 | PFDN5 | 0.8853052 | 1.02E-41 |
THYM | Cell metabolism gene | RPL36 | POLR2I | 0.88873357 | 1.84E-42 |
THYM | Cell metabolism gene | RPL36 | FAU | 0.892580309 | 2.50E-43 |
THYM | Cell metabolism gene | RPL36 | PGLS | 0.893797197 | 1.31E-43 |
THYM | CGC | RPL36 | RBM10 | 0.804159813 | 6.99E-29 |
THYM | CGC | RPL36 | MGMT | 0.808233787 | 2.26E-29 |
THYM | CGC | RPL36 | ASPSCR1 | 0.818161248 | 1.28E-30 |
THYM | Epifactor | RPL36 | RRP8 | 0.800790172 | 1.75E-28 |
THYM | Epifactor | RPL36 | C17orf49 | 0.802316063 | 1.16E-28 |
THYM | Epifactor | RPL36 | LAS1L | 0.821686295 | 4.41E-31 |
THYM | Epifactor | RPL36 | ZNHIT1 | 0.835744927 | 4.99E-33 |
THYM | Epifactor | RPL36 | EXOSC5 | 0.836757645 | 3.55E-33 |
THYM | Epifactor | RPL36 | TAF10 | 0.838264027 | 2.14E-33 |
THYM | Epifactor | RPL36 | PRPF31 | 0.845559913 | 1.68E-34 |
THYM | Epifactor | RPL36 | BRMS1 | 0.845885812 | 1.50E-34 |
THYM | Epifactor | RPL36 | SIRT6 | 0.860397738 | 6.24E-37 |
THYM | Epifactor | RPL36 | EXOSC4 | 0.868394758 | 2.32E-38 |
THYM | Epifactor | RPL36 | FBL | 0.894349893 | 9.75E-44 |
THYM | IUPHAR | RPL36 | ATP6V0B | 0.802690882 | 1.04E-28 |
THYM | IUPHAR | RPL36 | IMPDH2 | 0.827285828 | 7.77E-32 |
THYM | IUPHAR | RPL36 | MPST | 0.828682438 | 4.99E-32 |
THYM | IUPHAR | RPL36 | PTGES2 | 0.832028617 | 1.70E-32 |
THYM | IUPHAR | RPL36 | SIRT3 | 0.846978289 | 1.01E-34 |
THYM | IUPHAR | RPL36 | SLC27A5 | 0.858178049 | 1.50E-36 |
THYM | IUPHAR | RPL36 | SIRT6 | 0.860397738 | 6.24E-37 |
THYM | TF | RPL36 | CENPB | 0.800058452 | 2.13E-28 |
THYM | TF | RPL36 | THAP3 | 0.805627011 | 4.67E-29 |
THYM | TF | RPL36 | ZBTB48 | 0.837089919 | 3.18E-33 |
THYM | TF | RPL36 | NME2 | 0.837996735 | 2.34E-33 |
THYM | TF | RPL36 | THAP7 | 0.840045932 | 1.16E-33 |
THYM | TF | RPL36 | ZNF787 | 0.850087499 | 3.25E-35 |
THYM | TF | RPL36 | ZNF524 | 0.864346937 | 1.26E-37 |
THYM | TF | RPL36 | ZNF581 | 0.913057582 | 1.44E-48 |
THYM | TSG | RPL36 | GLTSCR2 | 0.804014236 | 7.28E-29 |
THYM | TSG | RPL36 | GABARAP | 0.817880639 | 1.39E-30 |
THYM | TSG | RPL36 | GNB2L1 | 0.831965302 | 1.73E-32 |
THYM | TSG | RPL36 | ZBTB48 | 0.837089919 | 3.18E-33 |
THYM | TSG | RPL36 | GSTP1 | 0.837831057 | 2.47E-33 |
THYM | TSG | RPL36 | BRMS1 | 0.845885812 | 1.50E-34 |
THYM | TSG | RPL36 | SIRT3 | 0.846978289 | 1.01E-34 |
THYM | TSG | RPL36 | STUB1 | 0.849392052 | 4.20E-35 |
THYM | TSG | RPL36 | TSSC4 | 0.855655529 | 4.00E-36 |
THYM | TSG | RPL36 | SIRT6 | 0.860397738 | 6.24E-37 |
THYM | TSG | RPL36 | GADD45GIP1 | 0.889365276 | 1.33E-42 |
UCS | Cell metabolism gene | RPL36 | GUK1 | 0.802240954 | 1.18E-28 |
UCS | Cell metabolism gene | RPL36 | TOMM22 | 0.804488874 | 6.39E-29 |
UCS | Cell metabolism gene | RPL36 | MMAB | 0.806159977 | 4.03E-29 |
UCS | Cell metabolism gene | RPL36 | ATP5G1 | 0.80661535 | 3.55E-29 |
UCS | Cell metabolism gene | RPL36 | PPCDC | 0.807777008 | 2.57E-29 |
UCS | Cell metabolism gene | RPL36 | SSR4 | 0.808381403 | 2.17E-29 |
UCS | Cell metabolism gene | RPL36 | PMPCA | 0.808788081 | 1.93E-29 |
UCS | Cell metabolism gene | RPL36 | POLR2J | 0.809293372 | 1.67E-29 |
UCS | Cell metabolism gene | RPL36 | ALG3 | 0.809880181 | 1.42E-29 |
UCS | Cell metabolism gene | RPL36 | NANS | 0.810801286 | 1.09E-29 |
UCS | Cell metabolism gene | RPL36 | PSMB7 | 0.81176998 | 8.27E-30 |
UCS | Cell metabolism gene | RPL36 | PSME2 | 0.811965048 | 7.82E-30 |
UCS | Cell metabolism gene | RPL36 | PSMD4 | 0.819911101 | 7.55E-31 |
UCS | Cell metabolism gene | RPL36 | PSMB3 | 0.822089835 | 3.90E-31 |
UCS | Cell metabolism gene | RPL36 | GEMIN7 | 0.822558005 | 3.38E-31 |
UCS | Cell metabolism gene | RPL36 | MIF | 0.823214745 | 2.76E-31 |
UCS | Cell metabolism gene | RPL36 | ACOT8 | 0.823485672 | 2.54E-31 |
UCS | Cell metabolism gene | RPL36 | POLE4 | 0.825043852 | 1.57E-31 |
UCS | Cell metabolism gene | RPL36 | TIMM10 | 0.825949442 | 1.18E-31 |
UCS | Cell metabolism gene | RPL36 | HMBS | 0.826858213 | 8.89E-32 |
UCS | Cell metabolism gene | RPL36 | IMPDH2 | 0.827285828 | 7.77E-32 |
UCS | Cell metabolism gene | RPL36 | GFER | 0.827583649 | 7.07E-32 |
UCS | Cell metabolism gene | RPL36 | PSMC5 | 0.827680218 | 6.86E-32 |
UCS | Cell metabolism gene | RPL36 | MPST | 0.828682438 | 4.99E-32 |
UCS | Cell metabolism gene | RPL36 | APRT | 0.829244677 | 4.17E-32 |
UCS | Cell metabolism gene | RPL36 | PTGES2 | 0.832028617 | 1.70E-32 |
UCS | Cell metabolism gene | RPL36 | ITPA | 0.832101902 | 1.66E-32 |
UCS | Cell metabolism gene | RPL36 | PHPT1 | 0.834192089 | 8.35E-33 |
UCS | Cell metabolism gene | RPL36 | EXOSC5 | 0.836757645 | 3.55E-33 |
UCS | Cell metabolism gene | RPL36 | LCMT1 | 0.837061517 | 3.21E-33 |
UCS | Cell metabolism gene | RPL36 | GSTP1 | 0.837831057 | 2.47E-33 |
UCS | Cell metabolism gene | RPL36 | TIMM8B | 0.837966529 | 2.36E-33 |
UCS | Cell metabolism gene | RPL36 | NME2 | 0.837996735 | 2.34E-33 |
UCS | Cell metabolism gene | RPL36 | POLR2H | 0.84189065 | 6.14E-34 |
UCS | Cell metabolism gene | RPL36 | TOMM7 | 0.847526426 | 8.30E-35 |
UCS | Cell metabolism gene | RPL36 | MTX1 | 0.848337431 | 6.18E-35 |
UCS | Cell metabolism gene | RPL36 | GMPPA | 0.854523401 | 6.17E-36 |
UCS | Cell metabolism gene | RPL36 | POLR2F | 0.855516021 | 4.22E-36 |
UCS | Cell metabolism gene | RPL36 | DPM3 | 0.856065801 | 3.41E-36 |
UCS | Cell metabolism gene | RPL36 | SNRPD2 | 0.856449346 | 2.94E-36 |
UCS | Cell metabolism gene | RPL36 | SLC27A5 | 0.858178049 | 1.50E-36 |
UCS | Cell metabolism gene | RPL36 | TIMM13 | 0.859458917 | 9.06E-37 |
UCS | Cell metabolism gene | RPL36 | SSR2 | 0.859668994 | 8.34E-37 |
UCS | Cell metabolism gene | RPL36 | TIMM50 | 0.868091567 | 2.64E-38 |
UCS | Cell metabolism gene | RPL36 | EXOSC4 | 0.868394758 | 2.32E-38 |
UCS | Cell metabolism gene | RPL36 | DPM2 | 0.86840691 | 2.31E-38 |
UCS | Cell metabolism gene | RPL36 | PFDN5 | 0.8853052 | 1.02E-41 |
UCS | Cell metabolism gene | RPL36 | POLR2I | 0.88873357 | 1.84E-42 |
UCS | Cell metabolism gene | RPL36 | FAU | 0.892580309 | 2.50E-43 |
UCS | Cell metabolism gene | RPL36 | PGLS | 0.893797197 | 1.31E-43 |
UCS | CGC | RPL36 | RBM10 | 0.804159813 | 6.99E-29 |
UCS | CGC | RPL36 | MGMT | 0.808233787 | 2.26E-29 |
UCS | CGC | RPL36 | ASPSCR1 | 0.818161248 | 1.28E-30 |
UCS | Epifactor | RPL36 | RRP8 | 0.800790172 | 1.75E-28 |
UCS | Epifactor | RPL36 | C17orf49 | 0.802316063 | 1.16E-28 |
UCS | Epifactor | RPL36 | LAS1L | 0.821686295 | 4.41E-31 |
UCS | Epifactor | RPL36 | ZNHIT1 | 0.835744927 | 4.99E-33 |
UCS | Epifactor | RPL36 | EXOSC5 | 0.836757645 | 3.55E-33 |
UCS | Epifactor | RPL36 | TAF10 | 0.838264027 | 2.14E-33 |
UCS | Epifactor | RPL36 | PRPF31 | 0.845559913 | 1.68E-34 |
UCS | Epifactor | RPL36 | BRMS1 | 0.845885812 | 1.50E-34 |
UCS | Epifactor | RPL36 | SIRT6 | 0.860397738 | 6.24E-37 |
UCS | Epifactor | RPL36 | EXOSC4 | 0.868394758 | 2.32E-38 |
UCS | Epifactor | RPL36 | FBL | 0.894349893 | 9.75E-44 |
UCS | IUPHAR | RPL36 | ATP6V0B | 0.802690882 | 1.04E-28 |
UCS | IUPHAR | RPL36 | IMPDH2 | 0.827285828 | 7.77E-32 |
UCS | IUPHAR | RPL36 | MPST | 0.828682438 | 4.99E-32 |
UCS | IUPHAR | RPL36 | PTGES2 | 0.832028617 | 1.70E-32 |
UCS | IUPHAR | RPL36 | SIRT3 | 0.846978289 | 1.01E-34 |
UCS | IUPHAR | RPL36 | SLC27A5 | 0.858178049 | 1.50E-36 |
UCS | IUPHAR | RPL36 | SIRT6 | 0.860397738 | 6.24E-37 |
UCS | TF | RPL36 | CENPB | 0.800058452 | 2.13E-28 |
UCS | TF | RPL36 | THAP3 | 0.805627011 | 4.67E-29 |
UCS | TF | RPL36 | ZBTB48 | 0.837089919 | 3.18E-33 |
UCS | TF | RPL36 | NME2 | 0.837996735 | 2.34E-33 |
UCS | TF | RPL36 | THAP7 | 0.840045932 | 1.16E-33 |
UCS | TF | RPL36 | ZNF787 | 0.850087499 | 3.25E-35 |
UCS | TF | RPL36 | ZNF524 | 0.864346937 | 1.26E-37 |
UCS | TF | RPL36 | ZNF581 | 0.913057582 | 1.44E-48 |
UCS | TSG | RPL36 | GLTSCR2 | 0.804014236 | 7.28E-29 |
UCS | TSG | RPL36 | GABARAP | 0.817880639 | 1.39E-30 |
UCS | TSG | RPL36 | GNB2L1 | 0.831965302 | 1.73E-32 |
UCS | TSG | RPL36 | ZBTB48 | 0.837089919 | 3.18E-33 |
UCS | TSG | RPL36 | GSTP1 | 0.837831057 | 2.47E-33 |
UCS | TSG | RPL36 | BRMS1 | 0.845885812 | 1.50E-34 |
UCS | TSG | RPL36 | SIRT3 | 0.846978289 | 1.01E-34 |
UCS | TSG | RPL36 | STUB1 | 0.849392052 | 4.20E-35 |
UCS | TSG | RPL36 | TSSC4 | 0.855655529 | 4.00E-36 |
UCS | TSG | RPL36 | SIRT6 | 0.860397738 | 6.24E-37 |
UCS | TSG | RPL36 | GADD45GIP1 | 0.889365276 | 1.33E-42 |
UVM | Cell metabolism gene | RPL36 | MPST | 0.80017052 | 5.39E-19 |
UVM | Cell metabolism gene | RPL36 | TOMM22 | 0.820014546 | 1.37E-20 |
UVM | Cell metabolism gene | RPL36 | SSR2 | 0.861074474 | 1.28E-24 |
UVM | Cell metabolism gene | RPL36 | FAU | 0.897072194 | 2.16E-29 |
UVM | Epifactor | RPL36 | TRIM28 | 0.823565185 | 6.74E-21 |
UVM | Epifactor | RPL36 | FBL | 0.901078187 | 4.96E-30 |
UVM | IUPHAR | RPL36 | MPST | 0.80017052 | 5.39E-19 |
UVM | IUPHAR | RPL36 | TRIM28 | 0.823565185 | 6.74E-21 |
UVM | Kinase | RPL36 | TRIM28 | 0.823565185 | 6.74E-21 |
UVM | TF | RPL36 | ZNF581 | 0.873379979 | 4.38E-26 |
UVM | TSG | RPL36 | GLTSCR2 | 0.869358759 | 1.37E-25 |
UVM | TSG | RPL36 | GNB2L1 | 0.896148692 | 3.01E-29 |
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Protein 3D structure Visit iCn3D. |
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Protein-protein interaction networks * Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
Overlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
* Edge colors based on TCGA cancer types. |
* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P)) |
Cancer type | Translation factor | Interacting protein coding gene | FC | adj.pval |
KIRP | RPL36 | RPL18A | -1.51651392808885 | 0.00016188295558095 |
KICH | RPL36 | RPS27A | 1.75396693785956 | 0.000187873840332031 |
KIRP | RPL36 | RPS16 | -1.35957043617517 | 0.00019507110118866 |
COAD | RPL36 | RPS3 | 1.48730375143014 | 0.000411599874496461 |
KIRP | RPL36 | RPS11 | -1.01861570565103 | 0.00105937570333481 |
LIHC | RPL36 | RPL8 | -4.84588284974558 | 0.00110314154326131 |
PRAD | RPL36 | RPL18A | 1.40600175748499 | 0.00205137828390396 |
KICH | RPL36 | RPL19 | 1.36901182894089 | 0.00250792503356934 |
KICH | RPL36 | RPS12 | 1.26997381758431 | 0.00308787822723389 |
LUAD | RPL36 | RPL19 | -1.31398026615725 | 0.00993159558412698 |
THCA | RPL36 | RPS16 | -6.16322798156577 | 0.0115764821363307 |
BLCA | RPL36 | RPS12 | -1.47804673440421 | 0.0204124450683594 |
BLCA | RPL36 | RPS27A | -1.04747470069188 | 0.0258216857910156 |
HNSC | RPL36 | RPS3 | -4.73505819095135 | 0.0273726439852453 |
COAD | RPL36 | RPS11 | 1.35307548998204 | 0.0312207043170929 |
LUSC | RPL36 | RPL19 | -2.14669889516666 | 0.044366810398747 |
KIRC | RPL36 | RPL19 | -2.73485271276676 | 1.33980982873695e-10 |
BRCA | RPL36 | RPS12 | -4.91239327478244 | 1.85340619742495e-09 |
KIRP | RPL36 | RPL37 | -1.17421621947139 | 2.26888805627823e-05 |
KIRC | RPL36 | RPL35 | -1.06475238059392 | 2.72286325678163e-08 |
KIRC | RPL36 | RPL8 | -1.18252459971773 | 5.64962994208288e-07 |
KIRP | RPL36 | RPL8 | -1.53003692350119 | 6.0301274061203e-05 |
KIRC | RPL36 | RPS16 | -1.66149869889384 | 7.8509870430991e-09 |
BRCA | RPL36 | RPS27A | -4.28512148200424 | 7.8788217967112e-14 |
KIRC | RPL36 | RPL37 | -2.87198822058464 | 8.03913394748564e-12 |
KIRP | RPL36 | RPL35 | -1.52981101975496 | 9.0546440333128e-05 |
KIRC | RPL36 | RPS3 | -1.29560847926387 | 9.05905681935088e-10 |
KIRC | RPL36 | RPL18A | -4.43079304960843 | 9.2516163152192e-11 |
Protein-protein interactors with this translation factor (BIOGRID-3.4.160) |
PPI interactors with RPL36 |
MAGEB2, PSTPIP1, CNBP, PRKRA, RPL18A, ARRB2, CUL3, CUL2, CDK2, CUL1, CAND1, APP, RPL18, RPL4, RPL30, RPL11, RPL35, RPL5, RPL19, RPL6, RPS8, RPL3, RPL14, RPL7A, RPS4X, RPL21, RPS25, RPL7, RPS16, RPS6, RPL23A, RPS28, RPS15, RPS24, RPL13, RPL27A, RPL8, RPL38, HNRNPDL, DDX42, DHX15, PTBP1, C19orf43, NONO, ESR1, FN1, VCAM1, UBL4A, ITGA4, PAN2, IGSF8, ICAM1, AIMP1, KARS, QARS, RPL17, DARS, EEF1E1, RPL15, RPL26, RPLP0, CUL7, RNF2, ABCE1, EIF6, HSD17B12, RNPS1, RPL10A, RPL12, RPL13A, RPL27, RPL28, DDX18, GTPBP4, RPL10, RPL10L, RPL22, RPL23, RPL24, RPL26L1, RPL31, RPL34, RPL35A, RPS10, RPS12, RPS13, RPS19, RPS3, RPL37A, RPL3L, RPL9, RPLP1, RPLP2, RPS11, RPS14, RPS15A, RPS18, RPS2, RPS20, RPS23, LOC101929876, RPS26, RPS3A, RPS5, RPS7, RPS9, RPSA, UBA52, WDR12, HIST1H3E, EZH2, HNRNPU, NPM1, NOP56, MPHOSPH8, EXOSC5, Rpl35, Srp72, Rrbp1, Bag2, Brwd3, ZNF746, CDC14B, DUSP13, DUSP5, ZC3HAV1, KNOP1, KIAA0020, MECP2, PES1, GPATCH4, PRDM5, NCL, CYLD, COX15, VDAC1, TRIM25, BRCA1, CFTR, API5, BMP4, MATN2, PCBP1, PYHIN1, PRPF8, AAR2, PIH1D1, EFTUD2, RNF4, CHD3, LARP7, SPDL1, RIOK1, ESR2, HEXIM1, MEPCE, AGR2, RECQL4, DCPS, MYC, AURKAIP1, METTL14, RC3H1, RC3H2, ATG16L1, PHB, RBX1, USP14, PPP1CC, VRK1, HIST1H4A, P2RY6, SNRNP70, ITFG1, HMGB1, N, BIRC3, STAU1, NFX1, WWP2, Dnajc17, CMTR1, ARIH2, PLEKHA4, YAP1, TFCP2, FANCD2, PTEN, ZC3H18, MAP3K14, PTPN6, MUC12, AASDH, FTSJ3, ZFC3H1, SNIP1, ORF10, ORF8, DUX4, CIT, ANLN, AURKB, CHMP4B, CHMP4C, ECT2, KIF14, KIF20A, KIF23, PRC1, GRSF1, MRRF, FASN, INS, Apc2, RBM39, FBP1, RIN3, DNAJC15, DNAJC1, DNAJC2, DNAJC9, SETD8, CBX6, HIST1H2AI, PABPC1, RALY, S100A7, SETD4, CBX1, S100A8, H1FX, DAW1, HNRNPA2B1, S100A9, CBX8, RPL29, HNRNPC, DDX58, UFL1, DDRGK1, TRIM37, USP15, FZR1, PAGE4, MAP4K2, MAP4K3, MAP4K4, MINK1, NUDCD2, CCDC106, ABT1, PAK1IP1, RSL24D1, ZNF845, DDX50, GNL2, H2AFX, PAPD5, ZNF184, DDX10, ZKSCAN8, POP1, DDX21, RPL7L1, PATZ1, NSA2, ZBTB24, IMP4, TRIM56, ZFP62, RRS1, ZNF770, MYBBP1A, GTPBP10, NOP2, SRP68, DDX24, SRSF5, ZNF70, SCAF1, GLE1, SRRM1, TAF1D, ZSCAN25, TRMT1L, NMNAT1, SCAF4, DKC1, ZC3H10, RRP15, ZNF48, ZCCHC7, HERC5, EBNA1BP2, CENPI, DDX54, ZNF689, ZNF791, TFB1M, TEX10, SREK1, NTN1, ZNF629, CENPQ, CCDC137, ZNF777, PRPF4B, RPF2, NKTR, BEND7, SRSF1, ZBTB41, ZNF445, GLTSCR2, WHSC1, RBM28, BMS1, NSD1, CCDC140, SPATS2L, PWP2, PDCD11, TOPORS, PPAN-P2RY11, CENPU, RRP1B, RPF1, ZNF646, BUD13, MOV10, ZNF768, YTHDC2, CEBPZ, ZNF624, AKAP17A, NOL8, ZNF16, ZNF708, SPTY2D1, ZNF668, REXO4, GZF1, CENPT, URB2, BOP1, NSUN4, STAU2, GLYR1, FLT1, SDAD1, DDX55, ZNF317, NIP7, CENPC, CDK12, ZCCHC6, DHX8, ZNF397, MYEF2, HP1BP3, RSL1D1, NOC2L, TSPYL2, ZNF354A, RRP8, URB1, RSBN1, MPHOSPH10, SURF6, NOL10, ZNF22, MINA, C7orf50, DDX31, ZNF512, DDX51, KMT2A, CENPN, DNTTIP2, RPL36AL, RPL32, ZNF107, RBM34, BRIX1, SRP72, SRPK1, DHX30, NVL, NOC3L, TAF1C, TAF1B, TAF1A, DDX27, TTF1, ZNF616, ZNF483, BTF3, FSCN1, FBXW7, NLRP7, RCHY1, PER2, KLF15, KLF16, KLF8, BRD4, BRDT, |
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Clinically associated variants from ClinVar. |
Gene | Chr | Position | RefSeq | VarSeq | RefSeeq | VarType | Pathogenic | Disease | VarInfo |
nsSNVs with sample frequency (size of circle) from TCGA 33 cancers. |
SNVs and Indels |
Gene | Cancer type | Chromosome | Start | End | RefSeeq | MutSeq | Mutation type | AAchange | # samples |
RPL36 | ESCA | chr19 | 5691411 | 5691411 | G | T | Nonsense_Mutation | p.E59* | 4 |
RPL36 | BRCA | chr19 | 5691557 | 5691557 | C | G | Missense_Mutation | p.I81M | 4 |
RPL36 | HNSC | chr19 | 5691333 | 5691333 | C | G | Missense_Mutation | p.L33V | 3 |
RPL36 | HNSC | chr19 | 5691434 | 5691434 | C | A | Missense_Mutation | p.D66E | 2 |
RPL36 | ESCA | chr19 | 5691620 | 5691620 | C | G | Silent | 2 | |
RPL36 | ESCA | chr19 | 5691620 | 5691620 | C | G | Silent | p.A102A | 2 |
RPL36 | BLCA | chr19 | 5691448 | 5691448 | A | C | Missense_Mutation | p.K71T | 2 |
RPL36 | ESCA | chr19 | 5691411 | 5691411 | G | T | Missense_Mutation | 2 | |
RPL36 | SARC | chr19 | 5691405 | 5691405 | G | C | Missense_Mutation | 2 | |
RPL36 | SARC | chr19 | 5691405 | 5691405 | G | C | Missense_Mutation | p.A57P | 2 |
RPL36 | STAD | chr19 | 5691598 | 5691598 | C | T | Missense_Mutation | p.A95V | 1 |
RPL36 | CESC | chr19 | 5691504 | 5691504 | G | T | Nonsense_Mutation | p.E90* | 1 |
RPL36 | THYM | chr19 | 5685085 | 5685085 | C | T | Silent | 1 | |
RPL36 | CESC | chr19 | 5691566 | 5691566 | G | A | Silent | p.K84 | 1 |
RPL36 | LGG | chr19 | 5691425 | 5691425 | C | T | Silent | p.V63V | 1 |
RPL36 | UVM | chr19 | 5691489 | 5691489 | G | T | Missense_Mutation | 1 | |
RPL36 | LGG | chr19 | 5691360 | 5691360 | G | A | Missense_Mutation | p.D42N | 1 |
RPL36 | ESCA | chr19 | 5691620 | 5691620 | C | G | Silent | p.A102 | 1 |
RPL36 | LGG | chr19 | 5691360 | 5691360 | G | A | Missense_Mutation | 1 | |
RPL36 | BLCA | chr19 | 5691448 | 5691448 | A | C | Missense_Mutation | 1 | |
RPL36 | LIHC | chr19 | 5691422 | 5691422 | G | - | Frame_Shift_Del | p.K62fs | 1 |
RPL36 | BLCA | chr19 | 5691353 | 5691353 | C | T | Silent | 1 | |
RPL36 | ESCA | chr19 | 5691411 | 5691411 | G | T | Nonsense_Mutation | p.E59X | 1 |
RPL36 | PAAD | chr19 | 5691599 | 5691599 | C | T | Silent | p.A95A | 1 |
RPL36 | BLCA | chr19 | 5691485 | 5691485 | G | A | Silent | 1 | |
RPL36 | PAAD | chr19 | 5691442 | 5691442 | C | T | Missense_Mutation | p.A69V | 1 |
RPL36 | SARC | chr19 | 5691490 | 5691490 | G | T | Missense_Mutation | 1 | |
RPL36 | BLCA | chr19 | 5691353 | 5691353 | C | T | Silent | p.F39F | 1 |
RPL36 | HNSC | chr19 | 5691434 | 5691434 | C | A | Missense_Mutation | 1 | |
RPL36 | HNSC | chr19 | 5691333 | 5691333 | C | G | Missense_Mutation | 1 | |
RPL36 | CESC | chr19 | 5691566 | 5691566 | G | A | Silent | 1 |
Copy number variation (CNV) of RPL36 * Click on the image to open the original image in a new window. |
Fusion gene breakpoints (product of the structural variants (SVs)) across RPL36 * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion genes with this translation factor from FusionGDB2.0. |
FusionGDB2 ID | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
101054 | CESC | TCGA-EK-A2RJ | ADAMTSL4 | chr1 | 150529811 | + | RPL36 | chr19 | 5691329 | + |
101054 | BRCA | TCGA-BH-A1FE-01A | CHAF1A | chr19 | 4439504 | + | RPL36 | chr19 | 5690610 | - |
101054 | N/A | BG231145 | CTC-329D1.2 | chr5 | 139773440 | - | RPL36 | chr19 | 5691678 | - |
101054 | N/A | AA552195 | FAM65B | chr6 | 24811905 | + | RPL36 | chr19 | 5691678 | - |
101054 | UCEC | TCGA-DF-A2KZ-01A | FOXP2 | chr7 | 113937158 | - | RPL36 | chr19 | 5691541 | + |
101054 | N/A | BM015665 | HMGA1 | chr6 | 34213557 | + | RPL36 | chr19 | 5691640 | + |
101054 | N/A | EC577108 | LRCH2 | chrX | 114433327 | - | RPL36 | chr19 | 5691678 | - |
101054 | BRCA | TCGA-C8-A12L-01A | MFSD12 | chr19 | 3547270 | - | RPL36 | chr19 | 5690042 | + |
101054 | N/A | BG231063 | PDE7A | chr8 | 66724444 | - | RPL36 | chr19 | 5691678 | - |
76642 | OV | TCGA-24-1435 | RPL36 | chr19 | 5691464 | + | ALG3 | chr3 | 183966759 | - |
76642 | N/A | EC443172 | RPL36 | chr19 | 5691636 | - | ATP5I | chr4 | 667175 | - |
78324 | N/A | DD229299 | RPL36 | chr19 | 5691637 | - | C2orf48 | chr2 | 10338955 | + |
91103 | READ | TCGA-AG-A008 | RPL36 | chr19 | 5691595 | + | CYBA | chr16 | 88709927 | - |
99204 | OV | TCGA-61-1743 | RPL36 | chr19 | 5690611 | + | GAB2 | chr11 | 77936248 | - |
87555 | N/A | AI497618 | RPL36 | chr19 | 5691635 | - | IGFBP5 | chr2 | 217541449 | + |
103141 | N/A | BP430734 | RPL36 | chr19 | 5691678 | + | KTN1 | chr14 | 56061235 | - |
79027 | N/A | BM015824 | RPL36 | chr19 | 5691464 | + | LONP1 | chr19 | 5691543 | + |
76642 | N/A | EC553345 | RPL36 | chr19 | 5690356 | + | LTBP3 | chr11 | 65306586 | - |
76642 | BRCA | TCGA-C8-A12L-01A | RPL36 | chr19 | 5690338 | + | MFSD12 | chr19 | 3544937 | - |
76642 | OV | TCGA-13-1497 | RPL36 | chr19 | 5691464 | + | MSLN | chr16 | 817375 | + |
95663 | N/A | BI862490 | RPL36 | chr19 | 5691678 | + | PPP6R2 | chr22 | 50793679 | - |
83565 | GBM | TCGA-27-2523-01A | RPL36 | chr19 | 5690338 | + | RANBP3 | chr19 | 5928098 | - |
76642 | N/A | BI856291 | RPL36 | chr19 | 5691678 | + | RRP1B | chr21 | 45099149 | - |
100454 | N/A | AI497603 | RPL36 | chr19 | 5691636 | - | SLC23A2 | chr20 | 4833667 | + |
100464 | N/A | AI547077 | RPL36 | chr19 | 5691678 | + | SLC24A2 | chr9 | 19588189 | - |
101879 | N/A | AA578143 | RPL36 | chr19 | 5691678 | + | THSD7B | chr2 | 138330270 | + |
85743 | N/A | EC533603 | RPL36 | chr19 | 5691678 | + | TPCN1 | chr12 | 113699240 | - |
95194 | N/A | BG231242 | RPL36 | chr19 | 5691678 | + | TTLL5 | chr14 | 76143132 | - |
76642 | GBM | TCGA-06-5415 | RPL36 | chr19 | 5690611 | + | TTYH1 | chr19 | 54946721 | + |
76642 | GBM | TCGA-06-5415-01A | RPL36 | chr19 | 5690611 | + | TTYH1 | chr19 | 54946722 | + |
101054 | N/A | BE881501 | UGGT1 | chr2 | 128947822 | + | RPL36 | chr19 | 5691635 | + |
101055 | N/A | BG271954 | ZFP36L2 | chr2 | 43451353 | + | RPL36 | chr19 | 5691411 | - |
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Kaplan-Meier plots with logrank tests of overall survival (OS) |
Cancer type | Translation factor | Coefficent | Hazard ratio | Wald test pval | Likelihool ratio pval | Logrank test pval | # samples |
SARC | RPL36 | 1.45658236106572 | 0.376092843065936 | 0.0011860066272683 | 0.00107527687359002 | 0.00127713122550061 | 265 |
PRAD | RPL36 | 2.4170200703532 | 0.882535405515251 | 0.0147699243644786 | 0.00445019593258095 | 0.00849357815840957 | 549 |
PRAD | RPL36 | 2.4170200703532 | 0.882535405515251 | 0.0147699243644786 | 0.00445019593258095 | 0.00849357815840957 | 549 |
BLCA | RPL36 | 0.865265267080846 | -0.144719151917529 | 0.0232533081024706 | 0.0239715354427255 | 0.023036593279356 | 422 |
KIRC | RPL36 | 1.28222927577321 | 0.248600184764906 | 1.24497131653444e-05 | 9.3337773828729e-06 | 1.12368821547886e-05 | 604 |
KIRC | RPL36 | 1.28222927577321 | 0.248600184764906 | 1.24497131653444e-05 | 9.3337773828729e-06 | 1.12368821547886e-05 | 604 |
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Differential gene expression between female and male. (Wilcoxon test, pval<0.05) |
Cancer type | Translation factor | pval | adj.p |
KIRC | RPL36 | 0.0121788251056638 | 0.34 |
SARC | RPL36 | 0.0203260314184145 | 0.55 |
MESO | RPL36 | 0.0479744281151289 | 1 |
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Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05) |
Cancer type | Translation factor | pval | adj.p |
LUSC | RPL36 | 0.00487936403844555 | 0.16 |
PAAD | RPL36 | 0.0119960441254012 | 0.38 |
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Drugs targeting genes involved in this translation factor. (DrugBank Version 5.1.8 2021-05-08) |
UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Diseases associated with this translation factor. (DisGeNet 4.0) |
Disease ID | Disease Name | # PubMeds | Disease source |
C1260899 | Anemia, Diamond-Blackfan | 1 | GENOMICS_ENGLAND |