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Center for Computational Systems Medicine
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Gene Summary

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Translation studies in PubMed

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Exon Skipping Events

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Expression

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Expression Regulation

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Associated Genes

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Protein 3D Structure

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Protein-Protein Interaction

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Mutations

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Prognostic Analysis

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Gender Association

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Age Association

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Related Drugs

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Related Diseases

Translation Factor: RPL36 (NCBI Gene ID:25873)


Gene Summary

check button Gene Summary
Gene InformationGene Name: RPL36
Gene ID: 25873
Gene Symbol

RPL36

Gene ID

25873

Gene Nameribosomal protein L36
SynonymsL36
Cytomap

19p13.3

Type of Geneprotein-coding
Description60S ribosomal protein L36large ribosomal subunit protein eL36
Modification date20200313
UniProtAcc

Q9Y3U8


check button Child GO biological process term(s) under GO:0006412
GO IDGO term
GO:0005840Ribosome
GO:0002181Cytoplasmic translation
GO:0006412Translation


check button Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneRPL36

GO:0002181

cytoplasmic translation

25957688



check button Inferred gene age of translation factor.
GeneInferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25
RPL36>1119.25


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Translation Studies in PubMed

check button We searched PubMed using 'RPL36[title] AND translation [title] AND human.'
GeneTitlePMID
RPL36..


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Exon Skipping Events

check buttonSkipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
For more annotations, please visit our ExonSkipDB.
all structure

check button Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ENSTExon skip start (DNA)Exon Skip end (DNA)ORF
ENST00000347512569051656906115CDS-5UTR
ENST00000577222569051656906115CDS-5UTR
ENST0000034751256913295691464In-frame
ENST0000039458056913295691464In-frame
ENST0000057722256913295691464In-frame
ENST0000057964956913295691464In-frame

check button Exon skipping position in the amino acid sequence.
ENSTExon skip start (DNA)Exon Skip end (DNA)Len(transcript seq)Exon skip start (mRNA)Exon Skip end (mRNA)Len(amino acid seq)Exon skip start (AA)Exon Skip end (AA)
ENST00000579649569132956914644661793131053176
ENST00000394580569132956914645732864201053176
ENST00000347512569132956914647242283621053176
ENST00000577222569132956914648916387721053176

check button Potentially (partially) lost protein functional features of UniProt.
UniProtAccExon skip start (AA)Exon Skip end (AA)Function feature start (AA)Function feature end (AA)Functional feature typeFunctional feature desc.
Q9Y3U831762105ChainID=PRO_0000195007;Note=60S ribosomal protein L36
Q9Y3U831762105ChainID=PRO_0000195007;Note=60S ribosomal protein L36
Q9Y3U831762105ChainID=PRO_0000195007;Note=60S ribosomal protein L36
Q9Y3U831762105ChainID=PRO_0000195007;Note=60S ribosomal protein L36
Q9Y3U831766262Modified residueNote=N6-acetyllysine;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:19608861;Dbxref=PMID:19608861
Q9Y3U831766262Modified residueNote=N6-acetyllysine;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:19608861;Dbxref=PMID:19608861
Q9Y3U831766262Modified residueNote=N6-acetyllysine;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:19608861;Dbxref=PMID:19608861
Q9Y3U831766262Modified residueNote=N6-acetyllysine;Ontology_term=ECO:0000244;evidence=ECO:0000244|PubMed:19608861;Dbxref=PMID:19608861
Q9Y3U831766767Natural variantID=VAR_051804;Note=K->E;Dbxref=dbSNP:rs11556110
Q9Y3U831766767Natural variantID=VAR_051804;Note=K->E;Dbxref=dbSNP:rs11556110
Q9Y3U831766767Natural variantID=VAR_051804;Note=K->E;Dbxref=dbSNP:rs11556110
Q9Y3U831766767Natural variantID=VAR_051804;Note=K->E;Dbxref=dbSNP:rs11556110


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Expression


check buttonGene expression level across TCGA pancancer
all structure

check buttonGene expression level across GTEx pantissue
all structure

check buttonExpression level of gene isoforms across TCGA pancancer
all structure

check buttonExpression level of gene isoforms across GTEx pantissue
all structure

check buttonCancer(tissue) type-specific expression level of Translation factor using z-score distriution
all structure

check buttonDifferential expression between tumor and matched normal (in the cancer types with more than 10 matched samples)
all structure
Cancer typeTranslation factorFCadj.pval
LUSCRPL36-2.060029817145780.000251881966259792
PRADRPL362.084732747470860.000648342999076925
KICHRPL36-3.141738846979740.00612920522689819
HNSCRPL36-3.509439500680520.0448960527075997
KIRCRPL36-1.947581362218021.67069036077484e-10
KIRPRPL36-1.4164424300542.31293961405754e-06
COADRPL363.041987775303585.1647424697876e-05
THCARPL36-3.583509952463945.65302269188786e-05


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Expression Regulation


check buttonTranslation factor expression regulation through miRNA binding
Cancer typeGenemiRNATargetScan binding score (Context++ score percentile)CoefficientPvalue


check buttonTranslation factor expression regulation through methylation in the promoter of Translation factor
all structure
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a
LAMLRPL36320.008094210303446640.6197259654471550.5777431919642860.6096732100345740.72755946874551
SARCRPL36320.001334401325259640.6208176923076920.520557676861291-0.6048414241116-0.195308693188178

check buttonTranslation factor expression regulation through methylation in the gene body of Translation factor (positive regulation)
all structure
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a
ACCRPL36230.00898588442748340.5252012787723790.645467379679144-0.455912085023558-1.76464014826509

check buttonTranslation factor expression regulation through copy number variation of Translation factor
all structure
Cancer typeGeneCoefficientPvalue
ESCARPL360.0267271570.00444972
KIRCRPL36-0.0453807860.010785928
DLBCRPL36-0.0133223120.047673327

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Associated Genes


check button Strongly correlated genes belong to cellular important gene groups with RPL36 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green)
all structure
Cancer typeGene groupTranslation factorCorrelated geneCoefficientPvalue
CHOLCell metabolism geneRPL36SNRPD20.8525562871.07E-13
CHOLCell metabolism geneRPL36PFDN50.8648524481.88E-14
CHOLCGCRPL36NACA0.85393598.90E-14
CHOLEpifactorRPL36FBL0.836384368.49E-13
CHOLTSGRPL36GLTSCR20.8135862271.10E-11
CHOLTSGRPL36GNB2L10.8272116432.49E-12
DLBCCell metabolism geneRPL36PGLS0.8040160275.93E-12
DLBCCell metabolism geneRPL36DGUOK0.8053431175.15E-12
DLBCCell metabolism geneRPL36PSMD130.809186433.40E-12
DLBCCell metabolism geneRPL36TOMM70.8122428382.43E-12
DLBCCell metabolism geneRPL36PTDSS20.8160619361.58E-12
DLBCCell metabolism geneRPL36PFDN40.8165281631.50E-12
DLBCCell metabolism geneRPL36POLR2J0.8176095041.33E-12
DLBCCell metabolism geneRPL36POLR2I0.8193929521.08E-12
DLBCCell metabolism geneRPL36POLR2L0.819607821.05E-12
DLBCCell metabolism geneRPL36PSMC50.8223204777.67E-13
DLBCCell metabolism geneRPL36TIMM130.8239400556.33E-13
DLBCCell metabolism geneRPL36PSMB30.8277875783.98E-13
DLBCCell metabolism geneRPL36POLR2F0.8303479522.90E-13
DLBCCell metabolism geneRPL36GEMIN70.8358763361.44E-13
DLBCCell metabolism geneRPL36TOMM220.8427910735.80E-14
DLBCCell metabolism geneRPL36GFER0.8540621641.19E-14
DLBCCell metabolism geneRPL36TIMM90.8642702332.52E-15
DLBCCell metabolism geneRPL36NME20.8766728293.20E-16
DLBCCell metabolism geneRPL36SNRPD20.8987879354.34E-18
DLBCCell metabolism geneRPL36PFDN50.9081729055.14E-19
DLBCCell metabolism geneRPL36FAU0.9165344866.26E-20
DLBCCGCRPL36HRAS0.807788973.96E-12
DLBCCGCRPL36NACA0.8610282874.19E-15
DLBCEpifactorRPL36DMAP10.8126336862.33E-12
DLBCEpifactorRPL36ZNHIT10.8130863092.21E-12
DLBCEpifactorRPL36FBL0.8300998983.00E-13
DLBCEpifactorRPL36TAF100.8382594781.06E-13
DLBCIUPHARRPL36HRAS0.807788973.96E-12
DLBCTFRPL36REXO40.8095113853.28E-12
DLBCTFRPL36ZNF5810.8095191113.28E-12
DLBCTFRPL36THAP30.8266009814.60E-13
DLBCTFRPL36ZNF4440.8341816661.79E-13
DLBCTFRPL36THAP70.8349155781.63E-13
DLBCTFRPL36THAP40.8449492034.33E-14
DLBCTFRPL36NME20.8766728293.20E-16
DLBCTSGRPL36GLTSCR20.8132490112.17E-12
DLBCTSGRPL36TSSC40.8231382266.97E-13
DLBCTSGRPL36PARK70.8263069894.77E-13
DLBCTSGRPL36GADD45GIP10.8864367265.35E-17
DLBCTSGRPL36GNB2L10.9069181176.92E-19
GBMCell metabolism geneRPL36SSR20.8048314222.30E-40
GBMCell metabolism geneRPL36GEMIN70.8160281032.53E-42
GBMCell metabolism geneRPL36PFDN50.8247755885.98E-44
GBMCell metabolism geneRPL36FAU0.8355770284.37E-46
GBMCell metabolism geneRPL36SNRPD20.8444841715.74E-48
GBMTSGRPL36GADD45GIP10.8574618476.23E-51
KICHCell metabolism geneRPL36SNRPB0.8327576631.41E-24
KICHCell metabolism geneRPL36SNRPD20.8540024115.46E-27
KICHTFRPL36ZNF5810.8209293862.25E-23
KICHTSGRPL36GLTSCR20.8002493381.80E-21
KIRPCell metabolism geneRPL36POLR2I0.8037914782.20E-74
KIRPCell metabolism geneRPL36PGLS0.8058898934.70E-75
KIRPCell metabolism geneRPL36SNRPD20.879649571.27E-105
KIRPCell metabolism geneRPL36FAU0.89936522.25E-117
KIRPEpifactorRPL36FBL0.8151750834.05E-78
KIRPTSGRPL36GADD45GIP10.8265448574.09E-82
LGGCell metabolism geneRPL36FAU0.8371509081.83E-140
LIHCCell metabolism geneRPL36PFDN50.8297695541.09E-108
LIHCTSGRPL36GADD45GIP10.8459334925.16E-117
MESOCell metabolism geneRPL36FAU0.8038215617.15E-21
PAADCell metabolism geneRPL36FAU0.8541884982.70E-53
PCPGCell metabolism geneRPL36PFDN50.8245595441.23E-47
PCPGTSGRPL36GNB2L10.818572022.04E-46
PRADCell metabolism geneRPL36POLR2H0.8100277923.89E-129
PRADCell metabolism geneRPL36TIMM90.8168818794.61E-133
PRADCell metabolism geneRPL36TOMM70.8249761966.44E-138
PRADCell metabolism geneRPL36PGLS0.8258864221.77E-138
PRADCell metabolism geneRPL36NME20.8298912455.45E-141
PRADCell metabolism geneRPL36POLR2F0.832487981.18E-142
PRADCell metabolism geneRPL36POLR2I0.8362063214.38E-145
PRADCell metabolism geneRPL36PSMB70.8481551652.47E-153
PRADCell metabolism geneRPL36TIMM130.8505154934.79E-155
PRADCell metabolism geneRPL36FAU0.8519591064.14E-156
PRADCell metabolism geneRPL36SNRPD20.8600120952.98E-162
PRADCGCRPL36NACA0.8182585667.16E-134
PRADEpifactorRPL36FBL0.8641920211.35E-165
PRADTFRPL36NME20.8298912455.45E-141
PRADTFRPL36ZNF5810.8352039692.01E-144
PRADTFRPL36ZNF5240.8494755562.74E-154
PRADTSGRPL36GADD45GIP10.8002891087.99E-124
PRADTSGRPL36GAS50.813258325.75E-131
PRADTSGRPL36GNB2L10.8640544051.75E-165
READTSGRPL36GADD45GIP10.813915454.91E-26
TGCTCell metabolism geneRPL36POLR2I0.801093683.75E-36
TGCTCell metabolism geneRPL36SNRPD20.8300557476.77E-41
THCACell metabolism geneRPL36PFDN50.8008261865.13E-129
THCACell metabolism geneRPL36POLR2I0.8196228425.20E-140
THCACell metabolism geneRPL36GPX40.839942381.94E-153
THCACell metabolism geneRPL36FAU0.8519065032.93E-162
THCACell metabolism geneRPL36SNRPD20.8775251574.42E-184
THCAEpifactorRPL36C17orf490.81472215.05E-137
THCAEpifactorRPL36TAF100.8178338496.56E-139
THCAIUPHARRPL36CSNK2B0.8126369798.85E-136
THCATFRPL36ZNF5240.8314044931.41E-147
THCATSGRPL36GNB2L10.844249251.58E-156
THYMCell metabolism geneRPL36GUK10.8022409541.18E-28
THYMCell metabolism geneRPL36TOMM220.8044888746.39E-29
THYMCell metabolism geneRPL36MMAB0.8061599774.03E-29
THYMCell metabolism geneRPL36ATP5G10.806615353.55E-29
THYMCell metabolism geneRPL36PPCDC0.8077770082.57E-29
THYMCell metabolism geneRPL36SSR40.8083814032.17E-29
THYMCell metabolism geneRPL36PMPCA0.8087880811.93E-29
THYMCell metabolism geneRPL36POLR2J0.8092933721.67E-29
THYMCell metabolism geneRPL36ALG30.8098801811.42E-29
THYMCell metabolism geneRPL36NANS0.8108012861.09E-29
THYMCell metabolism geneRPL36PSMB70.811769988.27E-30
THYMCell metabolism geneRPL36PSME20.8119650487.82E-30
THYMCell metabolism geneRPL36PSMD40.8199111017.55E-31
THYMCell metabolism geneRPL36PSMB30.8220898353.90E-31
THYMCell metabolism geneRPL36GEMIN70.8225580053.38E-31
THYMCell metabolism geneRPL36MIF0.8232147452.76E-31
THYMCell metabolism geneRPL36ACOT80.8234856722.54E-31
THYMCell metabolism geneRPL36POLE40.8250438521.57E-31
THYMCell metabolism geneRPL36TIMM100.8259494421.18E-31
THYMCell metabolism geneRPL36HMBS0.8268582138.89E-32
THYMCell metabolism geneRPL36IMPDH20.8272858287.77E-32
THYMCell metabolism geneRPL36GFER0.8275836497.07E-32
THYMCell metabolism geneRPL36PSMC50.8276802186.86E-32
THYMCell metabolism geneRPL36MPST0.8286824384.99E-32
THYMCell metabolism geneRPL36APRT0.8292446774.17E-32
THYMCell metabolism geneRPL36PTGES20.8320286171.70E-32
THYMCell metabolism geneRPL36ITPA0.8321019021.66E-32
THYMCell metabolism geneRPL36PHPT10.8341920898.35E-33
THYMCell metabolism geneRPL36EXOSC50.8367576453.55E-33
THYMCell metabolism geneRPL36LCMT10.8370615173.21E-33
THYMCell metabolism geneRPL36GSTP10.8378310572.47E-33
THYMCell metabolism geneRPL36TIMM8B0.8379665292.36E-33
THYMCell metabolism geneRPL36NME20.8379967352.34E-33
THYMCell metabolism geneRPL36POLR2H0.841890656.14E-34
THYMCell metabolism geneRPL36TOMM70.8475264268.30E-35
THYMCell metabolism geneRPL36MTX10.8483374316.18E-35
THYMCell metabolism geneRPL36GMPPA0.8545234016.17E-36
THYMCell metabolism geneRPL36POLR2F0.8555160214.22E-36
THYMCell metabolism geneRPL36DPM30.8560658013.41E-36
THYMCell metabolism geneRPL36SNRPD20.8564493462.94E-36
THYMCell metabolism geneRPL36SLC27A50.8581780491.50E-36
THYMCell metabolism geneRPL36TIMM130.8594589179.06E-37
THYMCell metabolism geneRPL36SSR20.8596689948.34E-37
THYMCell metabolism geneRPL36TIMM500.8680915672.64E-38
THYMCell metabolism geneRPL36EXOSC40.8683947582.32E-38
THYMCell metabolism geneRPL36DPM20.868406912.31E-38
THYMCell metabolism geneRPL36PFDN50.88530521.02E-41
THYMCell metabolism geneRPL36POLR2I0.888733571.84E-42
THYMCell metabolism geneRPL36FAU0.8925803092.50E-43
THYMCell metabolism geneRPL36PGLS0.8937971971.31E-43
THYMCGCRPL36RBM100.8041598136.99E-29
THYMCGCRPL36MGMT0.8082337872.26E-29
THYMCGCRPL36ASPSCR10.8181612481.28E-30
THYMEpifactorRPL36RRP80.8007901721.75E-28
THYMEpifactorRPL36C17orf490.8023160631.16E-28
THYMEpifactorRPL36LAS1L0.8216862954.41E-31
THYMEpifactorRPL36ZNHIT10.8357449274.99E-33
THYMEpifactorRPL36EXOSC50.8367576453.55E-33
THYMEpifactorRPL36TAF100.8382640272.14E-33
THYMEpifactorRPL36PRPF310.8455599131.68E-34
THYMEpifactorRPL36BRMS10.8458858121.50E-34
THYMEpifactorRPL36SIRT60.8603977386.24E-37
THYMEpifactorRPL36EXOSC40.8683947582.32E-38
THYMEpifactorRPL36FBL0.8943498939.75E-44
THYMIUPHARRPL36ATP6V0B0.8026908821.04E-28
THYMIUPHARRPL36IMPDH20.8272858287.77E-32
THYMIUPHARRPL36MPST0.8286824384.99E-32
THYMIUPHARRPL36PTGES20.8320286171.70E-32
THYMIUPHARRPL36SIRT30.8469782891.01E-34
THYMIUPHARRPL36SLC27A50.8581780491.50E-36
THYMIUPHARRPL36SIRT60.8603977386.24E-37
THYMTFRPL36CENPB0.8000584522.13E-28
THYMTFRPL36THAP30.8056270114.67E-29
THYMTFRPL36ZBTB480.8370899193.18E-33
THYMTFRPL36NME20.8379967352.34E-33
THYMTFRPL36THAP70.8400459321.16E-33
THYMTFRPL36ZNF7870.8500874993.25E-35
THYMTFRPL36ZNF5240.8643469371.26E-37
THYMTFRPL36ZNF5810.9130575821.44E-48
THYMTSGRPL36GLTSCR20.8040142367.28E-29
THYMTSGRPL36GABARAP0.8178806391.39E-30
THYMTSGRPL36GNB2L10.8319653021.73E-32
THYMTSGRPL36ZBTB480.8370899193.18E-33
THYMTSGRPL36GSTP10.8378310572.47E-33
THYMTSGRPL36BRMS10.8458858121.50E-34
THYMTSGRPL36SIRT30.8469782891.01E-34
THYMTSGRPL36STUB10.8493920524.20E-35
THYMTSGRPL36TSSC40.8556555294.00E-36
THYMTSGRPL36SIRT60.8603977386.24E-37
THYMTSGRPL36GADD45GIP10.8893652761.33E-42
UCSCell metabolism geneRPL36GUK10.8022409541.18E-28
UCSCell metabolism geneRPL36TOMM220.8044888746.39E-29
UCSCell metabolism geneRPL36MMAB0.8061599774.03E-29
UCSCell metabolism geneRPL36ATP5G10.806615353.55E-29
UCSCell metabolism geneRPL36PPCDC0.8077770082.57E-29
UCSCell metabolism geneRPL36SSR40.8083814032.17E-29
UCSCell metabolism geneRPL36PMPCA0.8087880811.93E-29
UCSCell metabolism geneRPL36POLR2J0.8092933721.67E-29
UCSCell metabolism geneRPL36ALG30.8098801811.42E-29
UCSCell metabolism geneRPL36NANS0.8108012861.09E-29
UCSCell metabolism geneRPL36PSMB70.811769988.27E-30
UCSCell metabolism geneRPL36PSME20.8119650487.82E-30
UCSCell metabolism geneRPL36PSMD40.8199111017.55E-31
UCSCell metabolism geneRPL36PSMB30.8220898353.90E-31
UCSCell metabolism geneRPL36GEMIN70.8225580053.38E-31
UCSCell metabolism geneRPL36MIF0.8232147452.76E-31
UCSCell metabolism geneRPL36ACOT80.8234856722.54E-31
UCSCell metabolism geneRPL36POLE40.8250438521.57E-31
UCSCell metabolism geneRPL36TIMM100.8259494421.18E-31
UCSCell metabolism geneRPL36HMBS0.8268582138.89E-32
UCSCell metabolism geneRPL36IMPDH20.8272858287.77E-32
UCSCell metabolism geneRPL36GFER0.8275836497.07E-32
UCSCell metabolism geneRPL36PSMC50.8276802186.86E-32
UCSCell metabolism geneRPL36MPST0.8286824384.99E-32
UCSCell metabolism geneRPL36APRT0.8292446774.17E-32
UCSCell metabolism geneRPL36PTGES20.8320286171.70E-32
UCSCell metabolism geneRPL36ITPA0.8321019021.66E-32
UCSCell metabolism geneRPL36PHPT10.8341920898.35E-33
UCSCell metabolism geneRPL36EXOSC50.8367576453.55E-33
UCSCell metabolism geneRPL36LCMT10.8370615173.21E-33
UCSCell metabolism geneRPL36GSTP10.8378310572.47E-33
UCSCell metabolism geneRPL36TIMM8B0.8379665292.36E-33
UCSCell metabolism geneRPL36NME20.8379967352.34E-33
UCSCell metabolism geneRPL36POLR2H0.841890656.14E-34
UCSCell metabolism geneRPL36TOMM70.8475264268.30E-35
UCSCell metabolism geneRPL36MTX10.8483374316.18E-35
UCSCell metabolism geneRPL36GMPPA0.8545234016.17E-36
UCSCell metabolism geneRPL36POLR2F0.8555160214.22E-36
UCSCell metabolism geneRPL36DPM30.8560658013.41E-36
UCSCell metabolism geneRPL36SNRPD20.8564493462.94E-36
UCSCell metabolism geneRPL36SLC27A50.8581780491.50E-36
UCSCell metabolism geneRPL36TIMM130.8594589179.06E-37
UCSCell metabolism geneRPL36SSR20.8596689948.34E-37
UCSCell metabolism geneRPL36TIMM500.8680915672.64E-38
UCSCell metabolism geneRPL36EXOSC40.8683947582.32E-38
UCSCell metabolism geneRPL36DPM20.868406912.31E-38
UCSCell metabolism geneRPL36PFDN50.88530521.02E-41
UCSCell metabolism geneRPL36POLR2I0.888733571.84E-42
UCSCell metabolism geneRPL36FAU0.8925803092.50E-43
UCSCell metabolism geneRPL36PGLS0.8937971971.31E-43
UCSCGCRPL36RBM100.8041598136.99E-29
UCSCGCRPL36MGMT0.8082337872.26E-29
UCSCGCRPL36ASPSCR10.8181612481.28E-30
UCSEpifactorRPL36RRP80.8007901721.75E-28
UCSEpifactorRPL36C17orf490.8023160631.16E-28
UCSEpifactorRPL36LAS1L0.8216862954.41E-31
UCSEpifactorRPL36ZNHIT10.8357449274.99E-33
UCSEpifactorRPL36EXOSC50.8367576453.55E-33
UCSEpifactorRPL36TAF100.8382640272.14E-33
UCSEpifactorRPL36PRPF310.8455599131.68E-34
UCSEpifactorRPL36BRMS10.8458858121.50E-34
UCSEpifactorRPL36SIRT60.8603977386.24E-37
UCSEpifactorRPL36EXOSC40.8683947582.32E-38
UCSEpifactorRPL36FBL0.8943498939.75E-44
UCSIUPHARRPL36ATP6V0B0.8026908821.04E-28
UCSIUPHARRPL36IMPDH20.8272858287.77E-32
UCSIUPHARRPL36MPST0.8286824384.99E-32
UCSIUPHARRPL36PTGES20.8320286171.70E-32
UCSIUPHARRPL36SIRT30.8469782891.01E-34
UCSIUPHARRPL36SLC27A50.8581780491.50E-36
UCSIUPHARRPL36SIRT60.8603977386.24E-37
UCSTFRPL36CENPB0.8000584522.13E-28
UCSTFRPL36THAP30.8056270114.67E-29
UCSTFRPL36ZBTB480.8370899193.18E-33
UCSTFRPL36NME20.8379967352.34E-33
UCSTFRPL36THAP70.8400459321.16E-33
UCSTFRPL36ZNF7870.8500874993.25E-35
UCSTFRPL36ZNF5240.8643469371.26E-37
UCSTFRPL36ZNF5810.9130575821.44E-48
UCSTSGRPL36GLTSCR20.8040142367.28E-29
UCSTSGRPL36GABARAP0.8178806391.39E-30
UCSTSGRPL36GNB2L10.8319653021.73E-32
UCSTSGRPL36ZBTB480.8370899193.18E-33
UCSTSGRPL36GSTP10.8378310572.47E-33
UCSTSGRPL36BRMS10.8458858121.50E-34
UCSTSGRPL36SIRT30.8469782891.01E-34
UCSTSGRPL36STUB10.8493920524.20E-35
UCSTSGRPL36TSSC40.8556555294.00E-36
UCSTSGRPL36SIRT60.8603977386.24E-37
UCSTSGRPL36GADD45GIP10.8893652761.33E-42
UVMCell metabolism geneRPL36MPST0.800170525.39E-19
UVMCell metabolism geneRPL36TOMM220.8200145461.37E-20
UVMCell metabolism geneRPL36SSR20.8610744741.28E-24
UVMCell metabolism geneRPL36FAU0.8970721942.16E-29
UVMEpifactorRPL36TRIM280.8235651856.74E-21
UVMEpifactorRPL36FBL0.9010781874.96E-30
UVMIUPHARRPL36MPST0.800170525.39E-19
UVMIUPHARRPL36TRIM280.8235651856.74E-21
UVMKinaseRPL36TRIM280.8235651856.74E-21
UVMTFRPL36ZNF5810.8733799794.38E-26
UVMTSGRPL36GLTSCR20.8693587591.37E-25
UVMTSGRPL36GNB2L10.8961486923.01E-29


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Protein structure


check button Protein 3D structure
Visit iCn3D.


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Protein-Protein Interaction


check button Protein-protein interaction networks
* Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure

check buttonOverlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure
check button
* Edge colors based on TCGA cancer types.

check button* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P))
all structure
Cancer typeTranslation factorInteracting protein coding geneFCadj.pval
KIRPRPL36RPL18A-1.516513928088850.00016188295558095
KICHRPL36RPS27A1.753966937859560.000187873840332031
KIRPRPL36RPS16-1.359570436175170.00019507110118866
COADRPL36RPS31.487303751430140.000411599874496461
KIRPRPL36RPS11-1.018615705651030.00105937570333481
LIHCRPL36RPL8-4.845882849745580.00110314154326131
PRADRPL36RPL18A1.406001757484990.00205137828390396
KICHRPL36RPL191.369011828940890.00250792503356934
KICHRPL36RPS121.269973817584310.00308787822723389
LUADRPL36RPL19-1.313980266157250.00993159558412698
THCARPL36RPS16-6.163227981565770.0115764821363307
BLCARPL36RPS12-1.478046734404210.0204124450683594
BLCARPL36RPS27A-1.047474700691880.0258216857910156
HNSCRPL36RPS3-4.735058190951350.0273726439852453
COADRPL36RPS111.353075489982040.0312207043170929
LUSCRPL36RPL19-2.146698895166660.044366810398747
KIRCRPL36RPL19-2.734852712766761.33980982873695e-10
BRCARPL36RPS12-4.912393274782441.85340619742495e-09
KIRPRPL36RPL37-1.174216219471392.26888805627823e-05
KIRCRPL36RPL35-1.064752380593922.72286325678163e-08
KIRCRPL36RPL8-1.182524599717735.64962994208288e-07
KIRPRPL36RPL8-1.530036923501196.0301274061203e-05
KIRCRPL36RPS16-1.661498698893847.8509870430991e-09
BRCARPL36RPS27A-4.285121482004247.8788217967112e-14
KIRCRPL36RPL37-2.871988220584648.03913394748564e-12
KIRPRPL36RPL35-1.529811019754969.0546440333128e-05
KIRCRPL36RPS3-1.295608479263879.05905681935088e-10
KIRCRPL36RPL18A-4.430793049608439.2516163152192e-11


check button Protein-protein interactors with this translation factor (BIOGRID-3.4.160)
PPI interactors with RPL36
MAGEB2, PSTPIP1, CNBP, PRKRA, RPL18A, ARRB2, CUL3, CUL2, CDK2, CUL1, CAND1, APP, RPL18, RPL4, RPL30, RPL11, RPL35, RPL5, RPL19, RPL6, RPS8, RPL3, RPL14, RPL7A, RPS4X, RPL21, RPS25, RPL7, RPS16, RPS6, RPL23A, RPS28, RPS15, RPS24, RPL13, RPL27A, RPL8, RPL38, HNRNPDL, DDX42, DHX15, PTBP1, C19orf43, NONO, ESR1, FN1, VCAM1, UBL4A, ITGA4, PAN2, IGSF8, ICAM1, AIMP1, KARS, QARS, RPL17, DARS, EEF1E1, RPL15, RPL26, RPLP0, CUL7, RNF2, ABCE1, EIF6, HSD17B12, RNPS1, RPL10A, RPL12, RPL13A, RPL27, RPL28, DDX18, GTPBP4, RPL10, RPL10L, RPL22, RPL23, RPL24, RPL26L1, RPL31, RPL34, RPL35A, RPS10, RPS12, RPS13, RPS19, RPS3, RPL37A, RPL3L, RPL9, RPLP1, RPLP2, RPS11, RPS14, RPS15A, RPS18, RPS2, RPS20, RPS23, LOC101929876, RPS26, RPS3A, RPS5, RPS7, RPS9, RPSA, UBA52, WDR12, HIST1H3E, EZH2, HNRNPU, NPM1, NOP56, MPHOSPH8, EXOSC5, Rpl35, Srp72, Rrbp1, Bag2, Brwd3, ZNF746, CDC14B, DUSP13, DUSP5, ZC3HAV1, KNOP1, KIAA0020, MECP2, PES1, GPATCH4, PRDM5, NCL, CYLD, COX15, VDAC1, TRIM25, BRCA1, CFTR, API5, BMP4, MATN2, PCBP1, PYHIN1, PRPF8, AAR2, PIH1D1, EFTUD2, RNF4, CHD3, LARP7, SPDL1, RIOK1, ESR2, HEXIM1, MEPCE, AGR2, RECQL4, DCPS, MYC, AURKAIP1, METTL14, RC3H1, RC3H2, ATG16L1, PHB, RBX1, USP14, PPP1CC, VRK1, HIST1H4A, P2RY6, SNRNP70, ITFG1, HMGB1, N, BIRC3, STAU1, NFX1, WWP2, Dnajc17, CMTR1, ARIH2, PLEKHA4, YAP1, TFCP2, FANCD2, PTEN, ZC3H18, MAP3K14, PTPN6, MUC12, AASDH, FTSJ3, ZFC3H1, SNIP1, ORF10, ORF8, DUX4, CIT, ANLN, AURKB, CHMP4B, CHMP4C, ECT2, KIF14, KIF20A, KIF23, PRC1, GRSF1, MRRF, FASN, INS, Apc2, RBM39, FBP1, RIN3, DNAJC15, DNAJC1, DNAJC2, DNAJC9, SETD8, CBX6, HIST1H2AI, PABPC1, RALY, S100A7, SETD4, CBX1, S100A8, H1FX, DAW1, HNRNPA2B1, S100A9, CBX8, RPL29, HNRNPC, DDX58, UFL1, DDRGK1, TRIM37, USP15, FZR1, PAGE4, MAP4K2, MAP4K3, MAP4K4, MINK1, NUDCD2, CCDC106, ABT1, PAK1IP1, RSL24D1, ZNF845, DDX50, GNL2, H2AFX, PAPD5, ZNF184, DDX10, ZKSCAN8, POP1, DDX21, RPL7L1, PATZ1, NSA2, ZBTB24, IMP4, TRIM56, ZFP62, RRS1, ZNF770, MYBBP1A, GTPBP10, NOP2, SRP68, DDX24, SRSF5, ZNF70, SCAF1, GLE1, SRRM1, TAF1D, ZSCAN25, TRMT1L, NMNAT1, SCAF4, DKC1, ZC3H10, RRP15, ZNF48, ZCCHC7, HERC5, EBNA1BP2, CENPI, DDX54, ZNF689, ZNF791, TFB1M, TEX10, SREK1, NTN1, ZNF629, CENPQ, CCDC137, ZNF777, PRPF4B, RPF2, NKTR, BEND7, SRSF1, ZBTB41, ZNF445, GLTSCR2, WHSC1, RBM28, BMS1, NSD1, CCDC140, SPATS2L, PWP2, PDCD11, TOPORS, PPAN-P2RY11, CENPU, RRP1B, RPF1, ZNF646, BUD13, MOV10, ZNF768, YTHDC2, CEBPZ, ZNF624, AKAP17A, NOL8, ZNF16, ZNF708, SPTY2D1, ZNF668, REXO4, GZF1, CENPT, URB2, BOP1, NSUN4, STAU2, GLYR1, FLT1, SDAD1, DDX55, ZNF317, NIP7, CENPC, CDK12, ZCCHC6, DHX8, ZNF397, MYEF2, HP1BP3, RSL1D1, NOC2L, TSPYL2, ZNF354A, RRP8, URB1, RSBN1, MPHOSPH10, SURF6, NOL10, ZNF22, MINA, C7orf50, DDX31, ZNF512, DDX51, KMT2A, CENPN, DNTTIP2, RPL36AL, RPL32, ZNF107, RBM34, BRIX1, SRP72, SRPK1, DHX30, NVL, NOC3L, TAF1C, TAF1B, TAF1A, DDX27, TTF1, ZNF616, ZNF483, BTF3, FSCN1, FBXW7, NLRP7, RCHY1, PER2, KLF15, KLF16, KLF8, BRD4, BRDT,


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Mutations


check button Clinically associated variants from ClinVar.
GeneChrPositionRefSeqVarSeqRefSeeqVarTypePathogenicDiseaseVarInfo


check button nsSNVs with sample frequency (size of circle) from TCGA 33 cancers.
all structure


check button SNVs and Indels
GeneCancer typeChromosomeStartEndRefSeeqMutSeqMutation typeAAchange# samples
RPL36ESCAchr1956914115691411GTNonsense_Mutationp.E59*4
RPL36BRCAchr1956915575691557CGMissense_Mutationp.I81M4
RPL36HNSCchr1956913335691333CGMissense_Mutationp.L33V3
RPL36HNSCchr1956914345691434CAMissense_Mutationp.D66E2
RPL36ESCAchr1956916205691620CGSilent2
RPL36ESCAchr1956916205691620CGSilentp.A102A2
RPL36BLCAchr1956914485691448ACMissense_Mutationp.K71T2
RPL36ESCAchr1956914115691411GTMissense_Mutation2
RPL36SARCchr1956914055691405GCMissense_Mutation2
RPL36SARCchr1956914055691405GCMissense_Mutationp.A57P2
RPL36STADchr1956915985691598CTMissense_Mutationp.A95V1
RPL36CESCchr1956915045691504GTNonsense_Mutationp.E90*1
RPL36THYMchr1956850855685085CTSilent1
RPL36CESCchr1956915665691566GASilentp.K841
RPL36LGGchr1956914255691425CTSilentp.V63V1
RPL36UVMchr1956914895691489GTMissense_Mutation1
RPL36LGGchr1956913605691360GAMissense_Mutationp.D42N1
RPL36ESCAchr1956916205691620CGSilentp.A1021
RPL36LGGchr1956913605691360GAMissense_Mutation1
RPL36BLCAchr1956914485691448ACMissense_Mutation1
RPL36LIHCchr1956914225691422G-Frame_Shift_Delp.K62fs1
RPL36BLCAchr1956913535691353CTSilent1
RPL36ESCAchr1956914115691411GTNonsense_Mutationp.E59X1
RPL36PAADchr1956915995691599CTSilentp.A95A1
RPL36BLCAchr1956914855691485GASilent1
RPL36PAADchr1956914425691442CTMissense_Mutationp.A69V1
RPL36SARCchr1956914905691490GTMissense_Mutation1
RPL36BLCAchr1956913535691353CTSilentp.F39F1
RPL36HNSCchr1956914345691434CAMissense_Mutation1
RPL36HNSCchr1956913335691333CGMissense_Mutation1
RPL36CESCchr1956915665691566GASilent1

check buttonCopy number variation (CNV) of RPL36
* Click on the image to open the original image in a new window.
all structure

check buttonFusion gene breakpoints (product of the structural variants (SVs)) across RPL36
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


check button Fusion genes with this translation factor from FusionGDB2.0.
FusionGDB2 IDDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
101054CESCTCGA-EK-A2RJADAMTSL4chr1150529811+RPL36chr195691329+
101054BRCATCGA-BH-A1FE-01ACHAF1Achr194439504+RPL36chr195690610-
101054N/ABG231145CTC-329D1.2chr5139773440-RPL36chr195691678-
101054N/AAA552195FAM65Bchr624811905+RPL36chr195691678-
101054UCECTCGA-DF-A2KZ-01AFOXP2chr7113937158-RPL36chr195691541+
101054N/ABM015665HMGA1chr634213557+RPL36chr195691640+
101054N/AEC577108LRCH2chrX114433327-RPL36chr195691678-
101054BRCATCGA-C8-A12L-01AMFSD12chr193547270-RPL36chr195690042+
101054N/ABG231063PDE7Achr866724444-RPL36chr195691678-
76642OVTCGA-24-1435RPL36chr195691464+ALG3chr3183966759-
76642N/AEC443172RPL36chr195691636-ATP5Ichr4667175-
78324N/ADD229299RPL36chr195691637-C2orf48chr210338955+
91103READTCGA-AG-A008RPL36chr195691595+CYBAchr1688709927-
99204OVTCGA-61-1743RPL36chr195690611+GAB2chr1177936248-
87555N/AAI497618RPL36chr195691635-IGFBP5chr2217541449+
103141N/ABP430734RPL36chr195691678+KTN1chr1456061235-
79027N/ABM015824RPL36chr195691464+LONP1chr195691543+
76642N/AEC553345RPL36chr195690356+LTBP3chr1165306586-
76642BRCATCGA-C8-A12L-01ARPL36chr195690338+MFSD12chr193544937-
76642OVTCGA-13-1497RPL36chr195691464+MSLNchr16817375+
95663N/ABI862490RPL36chr195691678+PPP6R2chr2250793679-
83565GBMTCGA-27-2523-01ARPL36chr195690338+RANBP3chr195928098-
76642N/ABI856291RPL36chr195691678+RRP1Bchr2145099149-
100454N/AAI497603RPL36chr195691636-SLC23A2chr204833667+
100464N/AAI547077RPL36chr195691678+SLC24A2chr919588189-
101879N/AAA578143RPL36chr195691678+THSD7Bchr2138330270+
85743N/AEC533603RPL36chr195691678+TPCN1chr12113699240-
95194N/ABG231242RPL36chr195691678+TTLL5chr1476143132-
76642GBMTCGA-06-5415RPL36chr195690611+TTYH1chr1954946721+
76642GBMTCGA-06-5415-01ARPL36chr195690611+TTYH1chr1954946722+
101054N/ABE881501UGGT1chr2128947822+RPL36chr195691635+
101055N/ABG271954ZFP36L2chr243451353+RPL36chr195691411-


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Prognostic Analysis


check button Kaplan-Meier plots with logrank tests of overall survival (OS)
all structure
Cancer typeTranslation factorCoefficentHazard ratioWald test pvalLikelihool ratio pvalLogrank test pval# samples
SARCRPL361.456582361065720.3760928430659360.00118600662726830.001075276873590020.00127713122550061265
PRADRPL362.41702007035320.8825354055152510.01476992436447860.004450195932580950.00849357815840957549
PRADRPL362.41702007035320.8825354055152510.01476992436447860.004450195932580950.00849357815840957549
BLCARPL360.865265267080846-0.1447191519175290.02325330810247060.02397153544272550.023036593279356422
KIRCRPL361.282229275773210.2486001847649061.24497131653444e-059.3337773828729e-061.12368821547886e-05604
KIRCRPL361.282229275773210.2486001847649061.24497131653444e-059.3337773828729e-061.12368821547886e-05604


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Translation factor and Gender


check button Differential gene expression between female and male. (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
KIRCRPL360.01217882510566380.34
SARCRPL360.02032603141841450.55
MESORPL360.04797442811512891

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Translation factor and Age


check button Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
LUSCRPL360.004879364038445550.16
PAADRPL360.01199604412540120.38

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Related Drugs


check button Drugs targeting genes involved in this translation factor.
(DrugBank Version 5.1.8 2021-05-08)
UniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases


check button Diseases associated with this translation factor.
(DisGeNet 4.0)
Disease IDDisease Name# PubMedsDisease source
C1260899Anemia, Diamond-Blackfan1GENOMICS_ENGLAND