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Translation Factor: RPL11 (NCBI Gene ID:6135) |
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Gene Summary |
Gene Information | Gene Name: RPL11 | Gene ID: 6135 | Gene Symbol | RPL11 | Gene ID | 6135 |
Gene Name | ribosomal protein L11 | |
Synonyms | DBA7|GIG34|L11|uL5 | |
Cytomap | 1p36.11 | |
Type of Gene | protein-coding | |
Description | 60S ribosomal protein L11CLL-associated antigen KW-12cell growth-inhibiting protein 34large ribosomal subunit protein uL5 | |
Modification date | 20200327 | |
UniProtAcc | P62913 |
Child GO biological process term(s) under GO:0006412 |
GO ID | GO term |
GO:0005840 | Ribosome |
GO:0002181 | Cytoplasmic translation |
GO:0006412 | Translation |
Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | RPL11 | GO:0002181 | cytoplasmic translation | 25957688 |
Hgene | RPL11 | GO:0010628 | positive regulation of gene expression | 18560357 |
Hgene | RPL11 | GO:2000435 | negative regulation of protein neddylation | 18560357 |
Inferred gene age of translation factor. |
Gene | Inferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25 |
RPL11 | >1119.25 |
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We searched PubMed using 'RPL11[title] AND translation [title] AND human.' |
Gene | Title | PMID |
RPL11 | Loss of tumor suppressor RPL5/RPL11 does not induce cell cycle arrest but impedes proliferation due to reduced ribosome content and translation capacity | 24061479 |
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Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. For more annotations, please visit our ExonSkipDB. |
Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | ORF |
Exon skipping position in the amino acid sequence. |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | Len(transcript seq) | Exon skip start (mRNA) | Exon Skip end (mRNA) | Len(amino acid seq) | Exon skip start (AA) | Exon Skip end (AA) |
Potentially (partially) lost protein functional features of UniProt. |
UniProtAcc | Exon skip start (AA) | Exon Skip end (AA) | Function feature start (AA) | Function feature end (AA) | Functional feature type | Functional feature desc. |
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Gene expression level across TCGA pancancer |
Gene expression level across GTEx pantissue |
Expression level of gene isoforms across TCGA pancancer |
Expression level of gene isoforms across GTEx pantissue |
Cancer(tissue) type-specific expression level of Translation factor using z-score distriution |
Differential expression between tumor and matched normal (in the cancer types with more than 10 matched samples) |
Cancer type | Translation factor | FC | adj.pval |
KIRC | RPL11 | -5.47536848868151 | 6.13619476098216e-10 |
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Translation factor expression regulation through miRNA binding |
Cancer type | Gene | miRNA | TargetScan binding score (Context++ score percentile) | Coefficient | Pvalue |
Translation factor expression regulation through methylation in the promoter of Translation factor |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
Translation factor expression regulation through methylation in the gene body of Translation factor (positive regulation) |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
Translation factor expression regulation through copy number variation of Translation factor |
Cancer type | Gene | Coefficient | Pvalue |
UVM | RPL11 | -0.187225278 | 0.000203145 |
SARC | RPL11 | -0.122862782 | 0.019352662 |
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Strongly correlated genes belong to cellular important gene groups with RPL11 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green) |
Cancer type | Gene group | Translation factor | Correlated gene | Coefficient | Pvalue |
DLBC | Cell metabolism gene | RPL11 | PFDN5 | 0.826071293 | 4.90E-13 |
DLBC | Cell metabolism gene | RPL11 | SNRPD2 | 0.835041619 | 1.61E-13 |
DLBC | Cell metabolism gene | RPL11 | FAU | 0.843684601 | 5.14E-14 |
DLBC | CGC | RPL11 | NACA | 0.835959105 | 1.43E-13 |
DLBC | TSG | RPL11 | GNB2L1 | 0.855018473 | 1.04E-14 |
KICH | TSG | RPL11 | GAS5 | 0.807618321 | 4.01E-22 |
KIRP | Cell metabolism gene | RPL11 | FAU | 0.815237102 | 3.86E-78 |
LGG | Epifactor | RPL11 | FBL | 0.858118298 | 5.63E-155 |
PRAD | Cell metabolism gene | RPL11 | TOMM7 | 0.814388597 | 1.29E-131 |
PRAD | Cell metabolism gene | RPL11 | SNRPD2 | 0.832267719 | 1.64E-142 |
PRAD | Cell metabolism gene | RPL11 | FAU | 0.844620309 | 8.05E-151 |
PRAD | CGC | RPL11 | NACA | 0.843116855 | 9.03E-150 |
PRAD | Epifactor | RPL11 | FBL | 0.867968003 | 1.03E-168 |
PRAD | TSG | RPL11 | GLTSCR2 | 0.802013431 | 9.63E-125 |
PRAD | TSG | RPL11 | GAS5 | 0.802539477 | 5.03E-125 |
PRAD | TSG | RPL11 | GNB2L1 | 0.863350635 | 6.50E-165 |
THCA | Cell metabolism gene | RPL11 | SNRPD2 | 0.840394965 | 9.27E-154 |
THCA | Cell metabolism gene | RPL11 | FAU | 0.861377181 | 8.20E-170 |
THCA | Cell metabolism gene | RPL11 | PFDN5 | 0.876010713 | 1.17E-182 |
THCA | CGC | RPL11 | NACA | 0.825263747 | 1.46E-143 |
THCA | Epifactor | RPL11 | FBL | 0.843521674 | 5.33E-156 |
THCA | TSG | RPL11 | GNB2L1 | 0.814442086 | 7.43E-137 |
THYM | Cell metabolism gene | RPL11 | POLR2I | 0.803466885 | 8.46E-29 |
THYM | Cell metabolism gene | RPL11 | SSR2 | 0.803576706 | 8.21E-29 |
THYM | Cell metabolism gene | RPL11 | PSMC3 | 0.806159928 | 4.03E-29 |
THYM | Cell metabolism gene | RPL11 | TIMM13 | 0.806894769 | 3.28E-29 |
THYM | Cell metabolism gene | RPL11 | POLR2J | 0.808337698 | 2.19E-29 |
THYM | Cell metabolism gene | RPL11 | SLC27A5 | 0.813554244 | 4.95E-30 |
THYM | Cell metabolism gene | RPL11 | TIMM8B | 0.820958145 | 5.50E-31 |
THYM | Cell metabolism gene | RPL11 | POLR2F | 0.821041763 | 5.37E-31 |
THYM | Cell metabolism gene | RPL11 | UROD | 0.821188834 | 5.13E-31 |
THYM | Cell metabolism gene | RPL11 | IDH3G | 0.826787044 | 9.09E-32 |
THYM | Cell metabolism gene | RPL11 | PSMB7 | 0.829508211 | 3.83E-32 |
THYM | Cell metabolism gene | RPL11 | DPM2 | 0.830963935 | 2.40E-32 |
THYM | Cell metabolism gene | RPL11 | SNRPD3 | 0.831148471 | 2.26E-32 |
THYM | Cell metabolism gene | RPL11 | APRT | 0.831350422 | 2.12E-32 |
THYM | Cell metabolism gene | RPL11 | SNRPD2 | 0.83975411 | 1.28E-33 |
THYM | Cell metabolism gene | RPL11 | PGLS | 0.843798759 | 3.15E-34 |
THYM | Cell metabolism gene | RPL11 | PFDN5 | 0.851102488 | 2.23E-35 |
THYM | Cell metabolism gene | RPL11 | FAU | 0.899487611 | 5.73E-45 |
THYM | CGC | RPL11 | TFPT | 0.80119465 | 1.57E-28 |
THYM | Epifactor | RPL11 | TFPT | 0.80119465 | 1.57E-28 |
THYM | Epifactor | RPL11 | SIRT6 | 0.803319234 | 8.80E-29 |
THYM | Epifactor | RPL11 | INO80E | 0.808564649 | 2.06E-29 |
THYM | Epifactor | RPL11 | BRMS1 | 0.81099026 | 1.03E-29 |
THYM | Epifactor | RPL11 | PRPF31 | 0.825847772 | 1.22E-31 |
THYM | Epifactor | RPL11 | C17orf49 | 0.829098985 | 4.37E-32 |
THYM | Epifactor | RPL11 | DMAP1 | 0.830908629 | 2.44E-32 |
THYM | Epifactor | RPL11 | FBL | 0.834696926 | 7.06E-33 |
THYM | Epifactor | RPL11 | ZNHIT1 | 0.834818984 | 6.78E-33 |
THYM | Epifactor | RPL11 | TAF10 | 0.84476895 | 2.23E-34 |
THYM | IUPHAR | RPL11 | SIRT6 | 0.803319234 | 8.80E-29 |
THYM | IUPHAR | RPL11 | SLC27A5 | 0.813554244 | 4.95E-30 |
THYM | TF | RPL11 | THAP7 | 0.801144954 | 1.59E-28 |
THYM | TF | RPL11 | THYN1 | 0.820427744 | 6.46E-31 |
THYM | TF | RPL11 | THAP3 | 0.825782668 | 1.25E-31 |
THYM | TF | RPL11 | ZNF428 | 0.826832532 | 8.96E-32 |
THYM | TSG | RPL11 | GABARAP | 0.800158728 | 2.07E-28 |
THYM | TSG | RPL11 | SIRT6 | 0.803319234 | 8.80E-29 |
THYM | TSG | RPL11 | TSSC4 | 0.805542563 | 4.78E-29 |
THYM | TSG | RPL11 | BRMS1 | 0.81099026 | 1.03E-29 |
THYM | TSG | RPL11 | PARK7 | 0.828563645 | 5.18E-32 |
THYM | TSG | RPL11 | GLTSCR2 | 0.869412584 | 1.50E-38 |
THYM | TSG | RPL11 | GNB2L1 | 0.889741659 | 1.10E-42 |
UCS | Cell metabolism gene | RPL11 | POLR2I | 0.803466885 | 8.46E-29 |
UCS | Cell metabolism gene | RPL11 | SSR2 | 0.803576706 | 8.21E-29 |
UCS | Cell metabolism gene | RPL11 | PSMC3 | 0.806159928 | 4.03E-29 |
UCS | Cell metabolism gene | RPL11 | TIMM13 | 0.806894769 | 3.28E-29 |
UCS | Cell metabolism gene | RPL11 | POLR2J | 0.808337698 | 2.19E-29 |
UCS | Cell metabolism gene | RPL11 | SLC27A5 | 0.813554244 | 4.95E-30 |
UCS | Cell metabolism gene | RPL11 | TIMM8B | 0.820958145 | 5.50E-31 |
UCS | Cell metabolism gene | RPL11 | POLR2F | 0.821041763 | 5.37E-31 |
UCS | Cell metabolism gene | RPL11 | UROD | 0.821188834 | 5.13E-31 |
UCS | Cell metabolism gene | RPL11 | IDH3G | 0.826787044 | 9.09E-32 |
UCS | Cell metabolism gene | RPL11 | PSMB7 | 0.829508211 | 3.83E-32 |
UCS | Cell metabolism gene | RPL11 | DPM2 | 0.830963935 | 2.40E-32 |
UCS | Cell metabolism gene | RPL11 | SNRPD3 | 0.831148471 | 2.26E-32 |
UCS | Cell metabolism gene | RPL11 | APRT | 0.831350422 | 2.12E-32 |
UCS | Cell metabolism gene | RPL11 | SNRPD2 | 0.83975411 | 1.28E-33 |
UCS | Cell metabolism gene | RPL11 | PGLS | 0.843798759 | 3.15E-34 |
UCS | Cell metabolism gene | RPL11 | PFDN5 | 0.851102488 | 2.23E-35 |
UCS | Cell metabolism gene | RPL11 | FAU | 0.899487611 | 5.73E-45 |
UCS | CGC | RPL11 | TFPT | 0.80119465 | 1.57E-28 |
UCS | Epifactor | RPL11 | TFPT | 0.80119465 | 1.57E-28 |
UCS | Epifactor | RPL11 | SIRT6 | 0.803319234 | 8.80E-29 |
UCS | Epifactor | RPL11 | INO80E | 0.808564649 | 2.06E-29 |
UCS | Epifactor | RPL11 | BRMS1 | 0.81099026 | 1.03E-29 |
UCS | Epifactor | RPL11 | PRPF31 | 0.825847772 | 1.22E-31 |
UCS | Epifactor | RPL11 | C17orf49 | 0.829098985 | 4.37E-32 |
UCS | Epifactor | RPL11 | DMAP1 | 0.830908629 | 2.44E-32 |
UCS | Epifactor | RPL11 | FBL | 0.834696926 | 7.06E-33 |
UCS | Epifactor | RPL11 | ZNHIT1 | 0.834818984 | 6.78E-33 |
UCS | Epifactor | RPL11 | TAF10 | 0.84476895 | 2.23E-34 |
UCS | IUPHAR | RPL11 | SIRT6 | 0.803319234 | 8.80E-29 |
UCS | IUPHAR | RPL11 | SLC27A5 | 0.813554244 | 4.95E-30 |
UCS | TF | RPL11 | THAP7 | 0.801144954 | 1.59E-28 |
UCS | TF | RPL11 | THYN1 | 0.820427744 | 6.46E-31 |
UCS | TF | RPL11 | THAP3 | 0.825782668 | 1.25E-31 |
UCS | TF | RPL11 | ZNF428 | 0.826832532 | 8.96E-32 |
UCS | TSG | RPL11 | GABARAP | 0.800158728 | 2.07E-28 |
UCS | TSG | RPL11 | SIRT6 | 0.803319234 | 8.80E-29 |
UCS | TSG | RPL11 | TSSC4 | 0.805542563 | 4.78E-29 |
UCS | TSG | RPL11 | BRMS1 | 0.81099026 | 1.03E-29 |
UCS | TSG | RPL11 | PARK7 | 0.828563645 | 5.18E-32 |
UCS | TSG | RPL11 | GLTSCR2 | 0.869412584 | 1.50E-38 |
UCS | TSG | RPL11 | GNB2L1 | 0.889741659 | 1.10E-42 |
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Protein 3D structure Visit iCn3D. |
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Protein-protein interaction networks * Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
Overlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
* Edge colors based on TCGA cancer types. |
* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P)) |
Cancer type | Translation factor | Interacting protein coding gene | FC | adj.pval |
KIRP | RPL11 | RPL18A | -1.51651392808885 | 0.00016188295558095 |
KICH | RPL11 | RPS27A | 1.75396693785956 | 0.000187873840332031 |
KIRP | RPL11 | RPS16 | -1.35957043617517 | 0.00019507110118866 |
KIRP | RPL11 | RPS11 | -1.01861570565103 | 0.00105937570333481 |
LIHC | RPL11 | RPL8 | -4.84588284974558 | 0.00110314154326131 |
PRAD | RPL11 | RPL18A | 1.40600175748499 | 0.00205137828390396 |
KICH | RPL11 | RPL19 | 1.36901182894089 | 0.00250792503356934 |
KICH | RPL11 | RPS12 | 1.26997381758431 | 0.00308787822723389 |
LIHC | RPL11 | MDM2 | -1.57082310333019 | 0.00323738381247511 |
LUAD | RPL11 | RPL19 | -1.31398026615725 | 0.00993159558412698 |
THCA | RPL11 | RPS16 | -6.16322798156577 | 0.0115764821363307 |
STAD | RPL11 | MDM2 | -1.99312650485559 | 0.0132303284481168 |
BLCA | RPL11 | RPS12 | -1.47804673440421 | 0.0204124450683594 |
BLCA | RPL11 | RPS27A | -1.04747470069188 | 0.0258216857910156 |
COAD | RPL11 | RPS11 | 1.35307548998204 | 0.0312207043170929 |
LUSC | RPL11 | RPL19 | -2.14669889516666 | 0.044366810398747 |
KIRC | RPL11 | RPL19 | -2.73485271276676 | 1.33980982873695e-10 |
BRCA | RPL11 | RPS12 | -4.91239327478244 | 1.85340619742495e-09 |
KIRP | RPL11 | RPL37 | -1.17421621947139 | 2.26888805627823e-05 |
KIRC | RPL11 | RPL35 | -1.06475238059392 | 2.72286325678163e-08 |
KIRC | RPL11 | RPL8 | -1.18252459971773 | 5.64962994208288e-07 |
KIRP | RPL11 | RPL8 | -1.53003692350119 | 6.0301274061203e-05 |
KIRC | RPL11 | RPS16 | -1.66149869889384 | 7.8509870430991e-09 |
BRCA | RPL11 | RPS27A | -4.28512148200424 | 7.8788217967112e-14 |
KIRC | RPL11 | RPL37 | -2.87198822058464 | 8.03913394748564e-12 |
KIRP | RPL11 | RPL35 | -1.52981101975496 | 9.0546440333128e-05 |
KIRC | RPL11 | RPL18A | -4.43079304960843 | 9.2516163152192e-11 |
Protein-protein interactors with this translation factor (BIOGRID-3.4.160) |
PPI interactors with RPL11 |
PML, MDM2, CDKN2A, TP53, BLMH, RPL23, RPL5, MYC, AGO4, NOP56, EBNA-LP, RAD21, ARRB2, CUL3, CUL4A, CUL4B, CUL5, CUL2, CDK2, CUL1, COPS5, COPS6, CAND1, NEDD8, RPL10A, RPL12, RPL13, RPL14, RPL15, RPL18A, RPL18, RPL19, RPL21, RPL23A, RPL24, RPL27A, RPL31, RPL37A, RPL6, RPL7A, RPL7, RPL9, RPS11, RPS12, RPS13, RPS14, RPS15A, RPS16, RPS20, RPS23, RPS24, RPS25, RPS28, RPS2, RPS3, RPS4X, RPS6, RPS8, RPSA, RPL30, RPS3A, RPS5, RPS19, RPL4, RPS7, RPL22, RPS26, RPLP1, RPL36, RPL8, RPLP0, RPL3, RPS9, RPL10, RPL35, RPS10, RPL38, RPL17, RPS21, EEF1A1, RPS27A, EEF2, GNL3, FBL, ILF3, ILF2, SLC25A5, NCL, NHP2L1, TUFM, HNRNPM, NOP58, NAP1L1, NOLC1, RPS27L, NOP2, MRPL12, BTF3, ANXA2, RPL10L, RPLP0P6, RRS1, NIFK, UQCRB, NEMF, UPF1, RBM8A, ESR1, LIG4, FMNL1, PA2G4, FN1, VCAM1, UBL4A, ITGA4, PELP1, VHL, PAN2, CD81, IGSF8, ICAM1, MYEOV2, ARFGAP1, PAIP2, STAT3, HP, IGF1R, C12orf5, TARDBP, QRICH1, ZBTB1, AURKA, CEP57, CEP250, TUBGCP2, TUBGCP3, FUS, CAMK2B, KRT40, KRTAP10-7, CUL7, OBSL1, CCDC8, EED, SURF2, BRIX1, FAU, MRPL24, MRPS10, MRPS7, PAK1IP1, DDX18, DDX24, EBNA1BP2, KPNA6, KRR1, PABPC1, POLR1B, RPL13A, RPL27, RPLP2, RPS15, RPL32, RPL35A, RPL3L, RPS18, LOC101929876, RPS27, APP, HSPB2, gag, AHSA1, HNRNPU, NPM1, Eif3a, Eif3e, Rpl35, Srp72, Naa50, Rrbp1, Brwd3, TP73, MCM2, Mdm2, ZNF618, RC3H1, GRWD1, CDC73, CHIT1, CNBP, ALDH2, TUBA1A, CYLD, INO80B, TRIM25, HEY1, BRCA1, LMNA, MTF1, ARL2, BDP1, DCTN4, DUT, EIF4G2, LEO1, PSMD4, SNAPC1, UBA2, ZNHIT6, FBXO7, GLTSCR2, PCBP1, ACO2, API5, BMP4, CTNNB1, GSK3A, TGFB1, YAF2, YAP1, PRPF8, EFTUD2, AAR2, PIH1D1, CHD3, CHD4, LARP7, TNF, SPDL1, RIOK1, HEXIM1, MEPCE, RNF123, SNAI1, AGR2, RECQL4, WWP1, GPC1, REST, ZFP36L2, ATM, Prkaa1, Prkab1, RPS6KB2, SENP1, UBE2I, METTL14, RC3H2, PHB, RBX1, USP14, NR2C2, PPP1CC, CTCF, KRAS, VRK1, VRK3, HIST1H4A, SNRNP70, ITFG1, ARAF, HMGB1, PPP1CA, STAU1, NFX1, WWP2, SOX2, PARK2, CMTR1, OSBPL3, DVL3, IP6K1, ARIH2, PLEKHA4, PINK1, TFCP2, FANCD2, HCVgp1, PCAT1, ZC3H18, PTPN6, MED6, TIPARP, SNIP1, M, nsp4, nsp6, ORF7a, MAP1LC3B, SMC1A, SMC3, STAG2, WAPAL, MAU2, CPEB4, NEK4, DUX4, CIT, ANLN, AURKB, CHMP4B, CHMP4C, ECT2, KIF14, MAD2L2, KIF20A, KIF23, PRC1, FASN, LRRC59, INS, NDN, Rnf183, BRD4, NINL, RBM45, Apc2, RBM39, FBP1, RIN3, OGT, SPOP, UFL1, DDRGK1, DHFRL1, TRIM37, ATG3, FZR1, PAGE4, NUDCD2, NAA40, ZBTB2, GLYR1, GLE1, ZNF771, ADARB1, NVL, NMNAT1, REPIN1, DDX21, SURF6, FTSJ3, GZF1, HEATR3, KIAA0020, MDM4, RBM34, CENPU, RPL36AL, WHSC1, ZNF184, NOC3L, DDX31, ZNF888, RPL28, HIST2H2BF, ZCCHC7, ZNF689, PAPD5, ZNF354A, ZBTB10, ZNF48, TAF1D, GNL2, HP1BP3, NSA2, GTPBP4, PPAN-P2RY11, USP42, RSL24D1, RBM28, PRDM15, ZNF770, ZNF668, UTP23, TTF1, RRP8, ZNF724P, DDX27, AATF, MAGEB2, KBTBD6, NIP7, HIST1H1E, NOC2L, DKC1, NKRF, SDAD1, RBMX2, LYAR, KNOP1, RPL7L1, DDX54, DDX56, RPL26, RSL1D1, ZC3HAV1, LUC7L, HIST1H1T, RPL26L1, PRPF4B, ZNF512, RRP1B, BMS1, EPB41L5, SRPK2, SRP72, FAM111A, IMP3, NOM1, RNH1, WDR74, GAR1, ZNF768, BUD13, RSBN1, UTP3, NOL12, SRP68, PRKRA, CEBPZ, DDX50, TRIP12, FCF1, ABT1, NPM3, IMP4, CCDC137, TRIM56, PBRM1, DHX30, DDX51, NGDN, NOP16, C1orf35, EPB41L4B, NEIL1, RPF2, ZNF346, SRSF5, DDX10, C8orf33, C7orf50, CDC5L, ZBTB11, ZNF574, GPATCH4, BOP1, ZFR, RRP15, MYBBP1A, CCDC59, TAF1C, HIST2H2AB, RPF1, CCDC86, MAK16, LIN28A, MPHOSPH10, SPRTN, FBXW7, NLRP7, nsp1, RCHY1, CCNF, N, PSMD9, PIGR, |
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Clinically associated variants from ClinVar. |
Gene | Chr | Position | RefSeq | VarSeq | RefSeeq | VarType | Pathogenic | Disease | VarInfo |
RPL11 | chr1 | 24018205 | C | T | single_nucleotide_variant | Benign | not_provided | ||
RPL11 | chr1 | 24018224 | C | T | single_nucleotide_variant | Benign | not_provided | ||
RPL11 | chr1 | 24018277 | C | G | single_nucleotide_variant | Benign | Diamond-Blackfan_anemia|Diamond-Blackfan_anemia_7 | SO:0001623|5_prime_UTR_variant | SO:0001623|5_prime_UTR_variant |
RPL11 | chr1 | 24018300 | T | C | single_nucleotide_variant | Uncertain_significance | Diamond-Blackfan_anemia_7 | SO:0001623|5_prime_UTR_variant | SO:0001623|5_prime_UTR_variant |
RPL11 | chr1 | 24018317 | G | T | single_nucleotide_variant | Uncertain_significance | Diamond-Blackfan_anemia | SO:0001583|missense_variant | SO:0001583|missense_variant |
RPL11 | chr1 | 24018318 | C | T | single_nucleotide_variant | Uncertain_significance | Diamond-Blackfan_anemia | SO:0001583|missense_variant | SO:0001583|missense_variant |
RPL11 | chr1 | 24018327 | G | C | single_nucleotide_variant | Likely_benign | not_provided | SO:0001627|intron_variant | SO:0001627|intron_variant |
RPL11 | chr1 | 24018338 | G | T | single_nucleotide_variant | Likely_benign | not_specified | SO:0001627|intron_variant | SO:0001627|intron_variant |
RPL11 | chr1 | 24018369 | G | T | single_nucleotide_variant | Benign | not_specified | SO:0001627|intron_variant | SO:0001627|intron_variant |
RPL11 | chr1 | 24018387 | G | T | single_nucleotide_variant | Benign | not_provided | SO:0001627|intron_variant | SO:0001627|intron_variant |
RPL11 | chr1 | 24018953 | T | C | single_nucleotide_variant | Benign | not_provided | SO:0001627|intron_variant | SO:0001627|intron_variant |
RPL11 | chr1 | 24018965 | T | G | single_nucleotide_variant | Benign | not_provided | SO:0001627|intron_variant | SO:0001627|intron_variant |
RPL11 | chr1 | 24018999 | T | C | single_nucleotide_variant | Benign | not_provided | SO:0001627|intron_variant | SO:0001627|intron_variant |
RPL11 | chr1 | 24019079 | G | T | single_nucleotide_variant | Benign/Likely_benign | not_provided | SO:0001627|intron_variant | SO:0001627|intron_variant |
RPL11 | chr1 | 24019089 | C | T | single_nucleotide_variant | Likely_benign | Diamond-Blackfan_anemia | SO:0001627|intron_variant | SO:0001627|intron_variant |
RPL11 | chr1 | 24019098 | G | T | single_nucleotide_variant | Uncertain_significance | Diamond-Blackfan_anemia | SO:0001574|splice_acceptor_variant,SO:0001627|intron_variant | SO:0001574|splice_acceptor_variant,SO:0001627|intron_variant |
RPL11 | chr1 | 24019106 | A | G | single_nucleotide_variant | Uncertain_significance | Diamond-Blackfan_anemia | SO:0001583|missense_variant | SO:0001583|missense_variant |
RPL11 | chr1 | 24019116 | G | A | single_nucleotide_variant | Likely_benign | Diamond-Blackfan_anemia | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
RPL11 | chr1 | 24019122 | C | T | single_nucleotide_variant | Benign/Likely_benign | Diamond-Blackfan_anemia|Diamond-Blackfan_anemia_7|not_provided | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
RPL11 | chr1 | 24019125 | C | T | single_nucleotide_variant | Likely_benign | Diamond-Blackfan_anemia | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
RPL11 | chr1 | 24019133 | AACTTCGC | A | Deletion | Pathogenic | Diamond-Blackfan_anemia_7 | SO:0001589|frameshift_variant | SO:0001589|frameshift_variant |
RPL11 | chr1 | 24019149 | ACT | A | Microsatellite | Pathogenic | Diamond-Blackfan_anemia_7 | SO:0001589|frameshift_variant | SO:0001589|frameshift_variant |
RPL11 | chr1 | 24019152 | CTG | C | Deletion | Pathogenic | Diamond-Blackfan_anemia | SO:0001589|frameshift_variant | SO:0001589|frameshift_variant |
RPL11 | chr1 | 24019194 | G | A | single_nucleotide_variant | Likely_benign | Diamond-Blackfan_anemia|Diamond-Blackfan_anemia_7 | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
RPL11 | chr1 | 24019194 | G | C | single_nucleotide_variant | Benign | Diamond-Blackfan_anemia|not_provided | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
RPL11 | chr1 | 24019198 | GC | G | Deletion | Pathogenic | Diamond-Blackfan_anemia | SO:0001589|frameshift_variant | SO:0001589|frameshift_variant |
RPL11 | chr1 | 24019201 | GC | G | Deletion | Pathogenic | Diamond-Blackfan_anemia | SO:0001589|frameshift_variant | SO:0001589|frameshift_variant |
RPL11 | chr1 | 24019207 | G | GT | Duplication | Pathogenic | not_provided | SO:0001589|frameshift_variant | SO:0001589|frameshift_variant |
RPL11 | chr1 | 24019209 | G | A | single_nucleotide_variant | Likely_benign | Diamond-Blackfan_anemia|not_provided | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
RPL11 | chr1 | 24019213 | G | T | single_nucleotide_variant | Pathogenic | Diamond-Blackfan_anemia | SO:0001587|nonsense | SO:0001587|nonsense |
RPL11 | chr1 | 24019231 | A | ACC | Duplication | Likely_pathogenic | Reticulocytopenia|Anemia | SO:0001589|frameshift_variant | SO:0001589|frameshift_variant |
RPL11 | chr1 | 24019234 | CCT | C | Deletion | Pathogenic | not_provided | SO:0001589|frameshift_variant | SO:0001589|frameshift_variant |
RPL11 | chr1 | 24019245 | C | T | single_nucleotide_variant | Benign | Diamond-Blackfan_anemia|Diamond-Blackfan_anemia_7 | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
RPL11 | chr1 | 24020290 | C | G | single_nucleotide_variant | Uncertain_significance | Diamond-Blackfan_anemia | SO:0001627|intron_variant | SO:0001627|intron_variant |
RPL11 | chr1 | 24020290 | C | T | single_nucleotide_variant | Uncertain_significance | Diamond-Blackfan_anemia_7 | SO:0001627|intron_variant | SO:0001627|intron_variant |
RPL11 | chr1 | 24020296 | G | A | single_nucleotide_variant | Pathogenic | Diamond-Blackfan_anemia|Diamond-Blackfan_anemia_7 | SO:0001574|splice_acceptor_variant | SO:0001574|splice_acceptor_variant |
RPL11 | chr1 | 24020298 | T | TA | Duplication | Pathogenic | Diamond-Blackfan_anemia | SO:0001589|frameshift_variant | SO:0001589|frameshift_variant |
RPL11 | chr1 | 24020310 | C | G | single_nucleotide_variant | Likely_benign | Diamond-Blackfan_anemia | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
RPL11 | chr1 | 24020328 | G | A | single_nucleotide_variant | Likely_benign | Diamond-Blackfan_anemia | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
RPL11 | chr1 | 24020341 | AT | A | Deletion | Pathogenic | Diamond-Blackfan_anemia_7 | SO:0001589|frameshift_variant | SO:0001589|frameshift_variant |
RPL11 | chr1 | 24020342 | T | C | single_nucleotide_variant | Uncertain_significance | Diamond-Blackfan_anemia | SO:0001583|missense_variant | SO:0001583|missense_variant |
RPL11 | chr1 | 24020362 | C | T | single_nucleotide_variant | Pathogenic | Diamond-Blackfan_anemia|Diamond-Blackfan_anemia_7|not_provided | SO:0001587|nonsense | SO:0001587|nonsense |
RPL11 | chr1 | 24020363 | G | A | single_nucleotide_variant | Uncertain_significance | Inborn_genetic_diseases | SO:0001583|missense_variant | SO:0001583|missense_variant |
RPL11 | chr1 | 24020397 | T | G | single_nucleotide_variant | Likely_benign | Diamond-Blackfan_anemia|not_provided | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
RPL11 | chr1 | 24020404 | G | A | single_nucleotide_variant | Likely_pathogenic | Diamond-Blackfan_anemia | SO:0001575|splice_donor_variant | SO:0001575|splice_donor_variant |
RPL11 | chr1 | 24020412 | A | T | single_nucleotide_variant | Uncertain_significance | Diamond-Blackfan_anemia_7 | SO:0001627|intron_variant | SO:0001627|intron_variant |
RPL11 | chr1 | 24020470 | A | G | single_nucleotide_variant | Benign | not_provided | SO:0001627|intron_variant | SO:0001627|intron_variant |
RPL11 | chr1 | 24021154 | G | A | single_nucleotide_variant | Uncertain_significance | Diamond-Blackfan_anemia | SO:0001583|missense_variant | SO:0001583|missense_variant |
RPL11 | chr1 | 24021155 | G | A | single_nucleotide_variant | Uncertain_significance | Diamond-Blackfan_anemia_7 | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
RPL11 | chr1 | 24021172 | A | G | single_nucleotide_variant | Uncertain_significance | Diamond-Blackfan_anemia_7 | SO:0001583|missense_variant | SO:0001583|missense_variant |
RPL11 | chr1 | 24021178 | ACTT | A | Deletion | Uncertain_significance | not_specified | SO:0001822|inframe_deletion | SO:0001822|inframe_deletion |
RPL11 | chr1 | 24021182 | C | G | single_nucleotide_variant | Uncertain_significance | not_provided | SO:0001583|missense_variant | SO:0001583|missense_variant |
RPL11 | chr1 | 24021185 | A | G | single_nucleotide_variant | Likely_benign | Diamond-Blackfan_anemia | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
RPL11 | chr1 | 24021191 | T | C | single_nucleotide_variant | Conflicting_interpretations_of_pathogenicity | Diamond-Blackfan_anemia|Diamond-Blackfan_anemia_7 | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
RPL11 | chr1 | 24021224 | C | T | single_nucleotide_variant | Benign | Diamond-Blackfan_anemia|Diamond-Blackfan_anemia_7|not_provided | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
RPL11 | chr1 | 24021228 | C | T | single_nucleotide_variant | Likely_benign | Diamond-Blackfan_anemia | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
RPL11 | chr1 | 24021290 | A | G | single_nucleotide_variant | Benign | Diamond-Blackfan_anemia|Diamond-Blackfan_anemia_7 | SO:0001627|intron_variant | SO:0001627|intron_variant |
RPL11 | chr1 | 24021403 | TCTC | T | Microsatellite | Benign | not_provided | SO:0001627|intron_variant | SO:0001627|intron_variant |
RPL11 | chr1 | 24022284 | A | G | single_nucleotide_variant | Likely_benign | Diamond-Blackfan_anemia|not_provided | SO:0001627|intron_variant | SO:0001627|intron_variant |
RPL11 | chr1 | 24022286 | A | G | single_nucleotide_variant | Likely_pathogenic | not_provided | SO:0001574|splice_acceptor_variant | SO:0001574|splice_acceptor_variant |
RPL11 | chr1 | 24022334 | C | CAG | Duplication | Uncertain_significance | not_specified | SO:0001589|frameshift_variant | SO:0001589|frameshift_variant |
RPL11 | chr1 | 24022343 | T | C | single_nucleotide_variant | Uncertain_significance | Diamond-Blackfan_anemia | SO:0001583|missense_variant | SO:0001583|missense_variant |
RPL11 | chr1 | 24022345 | G | A | single_nucleotide_variant | Uncertain_significance | Diamond-Blackfan_anemia | SO:0001583|missense_variant | SO:0001583|missense_variant |
RPL11 | chr1 | 24022352 | AAC | A | Microsatellite | Pathogenic | Diamond-Blackfan_anemia_7 | SO:0001589|frameshift_variant | SO:0001589|frameshift_variant |
RPL11 | chr1 | 24022365 | CAA | C | Deletion | Pathogenic | Diamond-Blackfan_anemia_7 | SO:0001589|frameshift_variant | SO:0001589|frameshift_variant |
RPL11 | chr1 | 24022368 | AGAG | A | Microsatellite | Pathogenic | Diamond-Blackfan_anemia_7 | SO:0001822|inframe_deletion | SO:0001822|inframe_deletion |
RPL11 | chr1 | 24022437 | A | G | single_nucleotide_variant | Benign | not_provided | SO:0001627|intron_variant | SO:0001627|intron_variant |
RPL11 | chr1 | 24022832 | A | G | single_nucleotide_variant | Pathogenic | Diamond-Blackfan_anemia|Diamond-Blackfan_anemia_7 | SO:0001574|splice_acceptor_variant | SO:0001574|splice_acceptor_variant |
RPL11 | chr1 | 24022915 | A | G | single_nucleotide_variant | Benign | Diamond-Blackfan_anemia_7|not_provided | SO:0001624|3_prime_UTR_variant | SO:0001624|3_prime_UTR_variant |
RPL11 | chr1 | 24023011 | C | T | single_nucleotide_variant | Benign | not_provided | SO:0001624|3_prime_UTR_variant | SO:0001624|3_prime_UTR_variant |
nsSNVs with sample frequency (size of circle) from TCGA 33 cancers. |
SNVs and Indels |
Gene | Cancer type | Chromosome | Start | End | RefSeeq | MutSeq | Mutation type | AAchange | # samples |
RPL11 | LUAD | chr1 | 24021184 | 24021184 | C | T | Missense_Mutation | p.S100L | 7 |
RPL11 | KIRP | chr1 | 24021204 | 24021204 | T | G | Missense_Mutation | p.F107V | 4 |
RPL11 | ESCA | chr1 | 24019129 | 24019129 | C | T | Missense_Mutation | p.R13W | 3 |
RPL11 | LIHC | chr1 | 24022368 | 24022368 | A | G | Silent | p.K159K | 3 |
RPL11 | COAD | chr1 | 24022315 | 24022315 | G | A | Missense_Mutation | p.A142T | 3 |
RPL11 | ESCA | chr1 | 24019156 | 24019156 | C | G | Missense_Mutation | p.L22V | 3 |
RPL11 | ESCA | chr1 | 24019156 | 24019156 | C | G | Missense_Mutation | 2 | |
RPL11 | SKCM | chr1 | 24020315 | 24020315 | C | T | Missense_Mutation | p.S59F | 2 |
RPL11 | BLCA | chr1 | 24019138 | 24019138 | C | T | Missense_Mutation | p.R16C | 2 |
RPL11 | ESCA | chr1 | 24021225 | 24021225 | G | T | Missense_Mutation | 2 | |
RPL11 | SKCM | chr1 | 24019189 | 24019189 | C | A | Missense_Mutation | p.L33M | 2 |
RPL11 | UVM | chr1 | 24019228 | 24019229 | - | AG | Frame_Shift_Ins | p.Q46fs | 2 |
RPL11 | BLCA | chr1 | 24021260 | 24021260 | C | G | Missense_Mutation | p.I125M | 2 |
RPL11 | PRAD | chr1 | 24019135 | 24019135 | C | T | Missense_Mutation | p.L15F | 2 |
RPL11 | BLCA | chr1 | 24021182 | 24021182 | C | T | Silent | p.F99F | 2 |
RPL11 | GBM | chr1 | 24018320 | 24018320 | G | C | Splice_Site | p.A2_splice | 2 |
RPL11 | PRAD | chr1 | 24020353 | 24020353 | T | C | Missense_Mutation | p.C72R | 2 |
RPL11 | UCEC | chr1 | 24022328 | 24022328 | G | A | Missense_Mutation | p.R146H | 2 |
RPL11 | SARC | chr1 | 24018316 | 24018331 | GGCGGTGAGTAGCTGG | - | Splice_Site | 2 | |
RPL11 | UCEC | chr1 | 24022839 | 24022839 | T | C | Silent | p.D171 | 2 |
RPL11 | KIRP | chr1 | 24021148 | 24021148 | A | T | Splice_Site | 1 | |
RPL11 | UVM | chr1 | 24019228 | 24019229 | - | - | Frame_Shift_Ins | 1 | |
RPL11 | PAAD | chr1 | 24022341 | 24022341 | C | A | Nonsense_Mutation | p.C150* | 1 |
RPL11 | KIRP | chr1 | 24021204 | 24021204 | T | G | Missense_Mutation | 1 | |
RPL11 | SKCM | chr1 | 24021238 | 24021238 | A | C | Missense_Mutation | p.K118T | 1 |
RPL11 | KIRP | chr1 | 24022841 | 24022841 | G | T | Missense_Mutation | 1 | |
RPL11 | UVM | chr1 | 24019228 | 24019229 | - | AG | Frame_Shift_Ins | p.D46fs | 1 |
RPL11 | PRAD | chr1 | 24021277 | 24021277 | A | G | Missense_Mutation | p.Y131C | 1 |
RPL11 | SKCM | chr1 | 24022390 | 24022390 | C | T | Nonsense_Mutation | p.Q167* | 1 |
RPL11 | LIHC | chr1 | 24022333 | 24022333 | A | G | Missense_Mutation | 1 | |
RPL11 | BLCA | chr1 | 24020391 | 24020391 | G | A | Silent | p.E84E | 1 |
RPL11 | GBM | chr1 | 24019182 | 24019185 | AGAC | - | Frame_Shift_Del | p.G30fs | 1 |
RPL11 | SKCM | chr1 | 24022389 | 24022389 | C | T | Silent | p.F166F | 1 |
RPL11 | BLCA | chr1 | 24020313 | 24020313 | A | G | Silent | p.R58R | 1 |
RPL11 | PRAD | chr1 | 24019112 | 24019112 | A | - | Frame_Shift_Del | p.E7fs | 1 |
RPL11 | HNSC | chr1 | 24019119 | 24019119 | G | A | Silent | 1 | |
RPL11 | STAD | chr1 | 24018320 | 24018320 | G | T | Splice_Site | . | 1 |
RPL11 | BLCA | chr1 | 24019138 | 24019138 | C | T | Missense_Mutation | 1 | |
RPL11 | LIHC | chr1 | 24022333 | 24022333 | A | G | Missense_Mutation | p.T148A | 1 |
RPL11 | CESC | chr1 | 24022845 | 24022845 | C | T | Silent | 1 | |
RPL11 | READ | chr1 | 24021271 | 24021271 | A | T | Missense_Mutation | p.D129V | 1 |
RPL11 | HNSC | chr1 | 24019119 | 24019119 | G | A | Silent | p.E9E | 1 |
RPL11 | THCA | chr1 | 24021247 | 24021247 | C | A | Missense_Mutation | 1 | |
RPL11 | BLCA | chr1 | 24021182 | 24021182 | C | T | Silent | 1 | |
RPL11 | LIHC | chr1 | 24022327 | 24022327 | C | T | Missense_Mutation | p.R146C | 1 |
RPL11 | CESC | chr1 | 24022845 | 24022845 | C | T | Silent | p.I173 | 1 |
RPL11 | READ | chr1 | 24022387 | 24022387 | T | C | Missense_Mutation | p.F166L | 1 |
RPL11 | KICH | chr1 | 24021261 | 24021261 | T | - | Frame_Shift_Del | 1 | |
RPL11 | THYM | chr1 | 24019235 | 24019235 | C | G | Missense_Mutation | p.P48R | 1 |
RPL11 | BLCA | chr1 | 24021260 | 24021260 | C | G | Missense_Mutation | 1 | |
RPL11 | LIHC | chr1 | 24020395 | 24020395 | G | T | Missense_Mutation | p.G86C | 1 |
RPL11 | READ | chr1 | 24022845 | 24022845 | C | T | Silent | p.I173I | 1 |
RPL11 | KICH | chr1 | 24021261 | 24021261 | T | - | Frame_Shift_Del | p.I125fs | 1 |
RPL11 | UCEC | chr1 | 24021169 | 24021170 | - | A | Frame_Shift_Ins | p.R95fs | 1 |
RPL11 | BLCA | chr1 | 24020313 | 24020313 | A | G | Silent | 1 | |
RPL11 | LUAD | chr1 | 24021209 | 24021209 | G | T | Silent | p.G108G | 1 |
RPL11 | SARC | chr1 | 24021265 | 24021265 | G | T | Missense_Mutation | 1 | |
RPL11 | KIRC | chr1 | 24022342 | 24022342 | A | T | Missense_Mutation | p.I151F | 1 |
RPL11 | BLCA | chr1 | 24018290 | 24018290 | C | T | Missense_Mutation | 1 | |
RPL11 | ESCA | chr1 | 24021225 | 24021225 | G | T | Missense_Mutation | p.D114Y | 1 |
RPL11 | BLCA | chr1 | 24019102 | 24019102 | G | A | Missense_Mutation | 1 | |
RPL11 | LUAD | chr1 | 24021163 | 24021163 | A | T | Missense_Mutation | p.E93V | 1 |
Copy number variation (CNV) of RPL11 * Click on the image to open the original image in a new window. |
Fusion gene breakpoints (product of the structural variants (SVs)) across RPL11 * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion genes with this translation factor from FusionGDB2.0. |
FusionGDB2 ID | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
97188 | N/A | AA076379 | AC006460.2 | chr2 | 191507719 | + | RPL11 | chr1 | 24022908 | - |
97188 | N/A | AA650167 | AC006460.2 | chr2 | 191507718 | + | RPL11 | chr1 | 24022908 | - |
97188 | N/A | CV387556 | ADAMTS2 | chr5 | 178701856 | - | RPL11 | chr1 | 24018296 | + |
97188 | N/A | BI496666 | ADNP | chr20 | 49506660 | - | RPL11 | chr1 | 24022904 | - |
97188 | N/A | BI491968 | CASC1 | chr12 | 25328617 | + | RPL11 | chr1 | 24022908 | - |
97188 | N/A | AU100496 | FRYL | chr4 | 48531069 | + | RPL11 | chr1 | 24019132 | + |
97188 | N/A | BG030720 | KPNB1 | chr17 | 45761891 | - | RPL11 | chr1 | 24021242 | + |
97188 | N/A | BU598868 | NAA50 | chr3 | 113442278 | - | RPL11 | chr1 | 24022297 | + |
97188 | READ | TCGA-AG-3882 | NAIP | chr5 | 70281590 | - | RPL11 | chr1 | 24019101 | + |
97188 | BRCA | TCGA-E2-A1LS-01A | PTEN | chr10 | 89705770 | + | RPL11 | chr1 | 24022859 | + |
97188 | CESC | TCGA-EA-A3HU-01A | PTEN | chr10 | 89705654 | + | RPL11 | chr1 | 24021153 | + |
97188 | KIRC | TCGA-A3-3382-01A | PTEN | chr10 | 89705653 | + | RPL11 | chr1 | 24021205 | + |
97188 | LAML | TCGA-AB-2854-03A | PTEN | chr10 | 89705770 | + | RPL11 | chr1 | 24022324 | + |
97188 | PRAD | TCGA-EJ-5512-01A | PTEN | chr10 | 89705655 | + | RPL11 | chr1 | 24021153 | + |
97188 | N/A | AA420671 | RGS6 | chr14 | 72680908 | + | RPL11 | chr1 | 24022908 | - |
75840 | N/A | AA522625 | RPL11 | chr1 | 24022908 | + | AC006460.2 | chr2 | 191507719 | - |
80097 | N/A | BG031525 | RPL11 | chr1 | 24022908 | + | AGMO | chr7 | 15175632 | - |
75840 | SARC | TCGA-DX-A8BX-01A | RPL11 | chr1 | 24021281 | + | ARMC9 | chr2 | 232225466 | + |
75840 | N/A | BG033694 | RPL11 | chr1 | 24022908 | + | C11orf40 | chr11 | 4596738 | + |
75840 | N/A | CD240152 | RPL11 | chr1 | 24022908 | + | C1S | chr12 | 7169581 | + |
99549 | BRCA | TCGA-D8-A1XZ-01A | RPL11 | chr1 | 24022398 | + | CAMTA1 | chr1 | 7805905 | + |
92198 | N/A | BE613010 | RPL11 | chr1 | 24020323 | - | EPHX1 | chr1 | 226027547 | + |
101363 | N/A | BG033299 | RPL11 | chr1 | 24022915 | + | FAM189A1 | chr15 | 29815797 | - |
95950 | N/A | AV693175 | RPL11 | chr1 | 24022915 | + | GRIK4 | chr11 | 120856328 | + |
75840 | N/A | AA447363 | RPL11 | chr1 | 24022300 | - | KDM5C | chrX | 53222271 | + |
82058 | N/A | BG575204 | RPL11 | chr1 | 24022915 | + | MORF4L1 | chr15 | 79153896 | - |
75840 | N/A | CB409379 | RPL11 | chr1 | 24022397 | + | NDUFB4 | chr3 | 120321083 | + |
95332 | N/A | BF218124 | RPL11 | chr1 | 24022883 | + | PAQR5 | chr15 | 69577797 | + |
102311 | N/A | BM013660 | RPL11 | chr1 | 24022908 | + | PARD3 | chr10 | 34685269 | + |
98891 | UCEC | TCGA-AP-A054-01A | RPL11 | chr1 | 24020403 | + | PDE6A | chr5 | 149246797 | - |
75840 | UCS | TCGA-ND-A4WC-01A | RPL11 | chr1 | 24020403 | + | PNRC2 | chr1 | 24287419 | + |
95629 | N/A | BI858658 | RPL11 | chr1 | 24022908 | + | PRR5-ARHGAP8 | chr22 | 45168133 | - |
98789 | N/A | EC486423 | RPL11 | chr1 | 24022398 | + | PTEN | chr10 | 89705718 | + |
95238 | N/A | AA523674 | RPL11 | chr1 | 24022908 | + | RNF138 | chr18 | 29674180 | - |
97188 | N/A | AA876625 | RPL11 | chr1 | 24022330 | + | RPL11 | chr1 | 24022384 | - |
97188 | N/A | BQ310852 | RPL11 | chr1 | 24019146 | - | RPL11 | chr1 | 24022354 | - |
98682 | UCEC | TCGA-AJ-A3EJ-01A | RPL11 | chr1 | 24022915 | - | SIAE | chr11 | 124543777 | - |
75840 | N/A | AU134575 | RPL11 | chr1 | 24022367 | + | STRN4 | chr19 | 47228158 | - |
101954 | N/A | BP280989 | RPL11 | chr1 | 24021281 | + | TCEB3 | chr1 | 24075511 | + |
97303 | N/A | CD388242 | RPL11 | chr1 | 24020406 | + | TKT | chr3 | 53259752 | - |
75840 | N/A | CN269184 | RPL11 | chr1 | 24022336 | + | TMCO6 | chr5 | 140021281 | + |
75840 | STAD | TCGA-BR-8676-01A | RPL11 | chr1 | 24022908 | + | ZNF747 | chr16 | 30542803 | - |
97188 | STAD | TCGA-IN-7808-01A | SF3B2 | chr11 | 65828202 | + | RPL11 | chr1 | 24022288 | + |
97188 | Non-Cancer | 131Nd | SNHG1 | chr11 | 62622895 | - | RPL11 | chr1 | 24022287 | + |
97188 | N/A | BE044946 | SUN2 | chr22 | 39159587 | + | RPL11 | chr1 | 24022908 | - |
97188 | N/A | BG272717 | THADA | chr2 | 43731343 | + | RPL11 | chr1 | 24022912 | - |
97189 | N/A | AA483472 | USP12 | chr13 | 27727077 | - | RPL11 | chr1 | 24022904 | - |
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Kaplan-Meier plots with logrank tests of overall survival (OS) |
Cancer type | Translation factor | Coefficent | Hazard ratio | Wald test pval | Likelihool ratio pval | Logrank test pval | # samples |
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Differential gene expression between female and male. (Wilcoxon test, pval<0.05) |
Cancer type | Translation factor | pval | adj.p |
SARC | RPL11 | 0.00730598665757407 | 0.2 |
BRCA | RPL11 | 0.0195653356260141 | 0.53 |
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Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05) |
Cancer type | Translation factor | pval | adj.p |
LGG | RPL11 | 0.00335955529948194 | 0.11 |
BRCA | RPL11 | 0.000328302873351686 | 0.011 |
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Drugs targeting genes involved in this translation factor. (DrugBank Version 5.1.8 2021-05-08) |
UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
P62913 | DB02494 | (S)-3-phenyllactic acid | Small molecule | Experimental | |
P62913 | DB07374 | Anisomycin | Small molecule | Experimental | |
P62913 | DB08437 | Puromycin | Small molecule | Experimental | |
P62913 | DB02494 | (S)-3-phenyllactic acid | |||
P62913 | DB07374 | Anisomycin | |||
P62913 | DB08437 | Puromycin |
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Diseases associated with this translation factor. (DisGeNet 4.0) |
Disease ID | Disease Name | # PubMeds | Disease source |
C1260899 | Anemia, Diamond-Blackfan | 4 | GENOMICS_ENGLAND |
C2675512 | Diamond-Blackfan Anemia 7 | 3 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
C0431890 | Hypoplasia of thumb | 2 | GENOMICS_ENGLAND |
C0376358 | Malignant neoplasm of prostate | 1 | CTD_human |