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Translation Factor: FOXO3 (NCBI Gene ID:2309) |
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Gene Summary |
Gene Information | Gene Name: FOXO3 | Gene ID: 2309 | Gene Symbol | FOXO3 | Gene ID | 2309 |
Gene Name | forkhead box O3 | |
Synonyms | AF6q21|FKHRL1|FKHRL1P2|FOXO2|FOXO3A | |
Cytomap | 6q21 | |
Type of Gene | protein-coding | |
Description | forkhead box protein O3forkhead box O3Aforkhead homolog (rhabdomyosarcoma) like 1forkhead in rhabdomyosarcoma-like 1forkhead, Drosophila, homolog of, in rhabdomyosarcoma-like 1 | |
Modification date | 20200329 | |
UniProtAcc | O43524 |
Child GO biological process term(s) under GO:0006412 |
GO ID | GO term |
GO:0006417 | Regulation of translation |
GO:0006412 | Translation |
Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | FOXO3 | GO:0000122 | negative regulation of transcription by RNA polymerase II | 20371612 |
Hgene | FOXO3 | GO:0006417 | regulation of translation | 21329882 |
Hgene | FOXO3 | GO:0043065 | positive regulation of apoptotic process | 20371612 |
Hgene | FOXO3 | GO:0045648 | positive regulation of erythrocyte differentiation | 14734530 |
Hgene | FOXO3 | GO:0045893 | positive regulation of transcription, DNA-templated | 10102273|15084260 |
Hgene | FOXO3 | GO:0045944 | positive regulation of transcription by RNA polymerase II | 10102273|14734530 |
Inferred gene age of translation factor. |
Gene | Inferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25 |
FOXO3 | (355.7 - 733] |
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We searched PubMed using 'FOXO3[title] AND translation [title] AND human.' |
Gene | Title | PMID |
FOXO3 | RNA-binding protein YTHDF3 suppresses interferon-dependent antiviral responses by promoting FOXO3 translation | 30591559 |
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Skipped exons in TCGA and GTEx based on Ensembl gene isoform structure. * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. For more annotations, please visit our ExonSkipDB. |
Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | ORF |
ENST00000343882 | 108984657 | 108986092 | 3UTR-3CDS |
ENST00000406360 | 108984657 | 108986092 | 3UTR-3CDS |
Exon skipping position in the amino acid sequence. |
ENST | Exon skip start (DNA) | Exon Skip end (DNA) | Len(transcript seq) | Exon skip start (mRNA) | Exon Skip end (mRNA) | Len(amino acid seq) | Exon skip start (AA) | Exon Skip end (AA) |
Potentially (partially) lost protein functional features of UniProt. |
UniProtAcc | Exon skip start (AA) | Exon Skip end (AA) | Function feature start (AA) | Function feature end (AA) | Functional feature type | Functional feature desc. |
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Gene expression level across TCGA pancancer |
Gene expression level across GTEx pantissue |
Expression level of gene isoforms across TCGA pancancer |
Expression level of gene isoforms across GTEx pantissue |
Cancer(tissue) type-specific expression level of Translation factor using z-score distriution |
Differential expression between tumor and matched normal (in the cancer types with more than 10 matched samples) |
Cancer type | Translation factor | FC | adj.pval |
LIHC | FOXO3 | 1.53551104941424 | 0.00126327311470459 |
KICH | FOXO3 | 2.3552334994037 | 0.00308787822723389 |
LUSC | FOXO3 | -1.27881478220054 | 0.0174932185880974 |
STAD | FOXO3 | -1.49443762596336 | 0.0375871751457453 |
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Translation factor expression regulation through miRNA binding |
Cancer type | Gene | miRNA | TargetScan binding score (Context++ score percentile) | Coefficient | Pvalue |
GBM | FOXO3 | hsa-miR-223-3p | 90 | -1 | 0.0166666666666667 |
KICH | FOXO3 | hsa-miR-30c-5p | 72 | 0.417030288653588 | 0.000131674063476988 |
Translation factor expression regulation through methylation in the promoter of Translation factor |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
Translation factor expression regulation through methylation in the gene body of Translation factor (positive regulation) |
Cancer type | Gene | methyl group b | methyl group a | DEG pval | avg methyl in b | avg methyl in a | avg exp in b | avg exp in a |
GBM | FOXO3 | 2 | 3 | 0.00970851687601488 | 0.570542962962963 | 0.629531811748054 | -0.04387313564856 | 0.141079836750584 |
SKCM | FOXO3 | 2 | 3 | 0.0218027475571087 | 0.572639880952381 | 0.651418346774194 | -0.0615778975532762 | 0.11831795498129 |
Translation factor expression regulation through copy number variation of Translation factor |
Cancer type | Gene | Coefficient | Pvalue |
KIRC | FOXO3 | 0.027790677 | 0.017124857 |
SKCM | FOXO3 | 0.037016873 | 0.045830577 |
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Strongly correlated genes belong to cellular important gene groups with FOXO3 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green) |
Cancer type | Gene group | Translation factor | Correlated gene | Coefficient | Pvalue |
THYM | Cell metabolism gene | FOXO3 | GALNT3 | 0.822835415 | 3.10E-31 |
THYM | Cell metabolism gene | FOXO3 | PGM3 | 0.827207814 | 7.96E-32 |
THYM | Cell metabolism gene | FOXO3 | PIK3C2A | 0.836336474 | 4.09E-33 |
THYM | CGC | FOXO3 | BMPR1A | 0.804063076 | 7.18E-29 |
THYM | CGC | FOXO3 | SETBP1 | 0.83705612 | 3.21E-33 |
THYM | Epifactor | FOXO3 | ZZZ3 | 0.816932803 | 1.84E-30 |
THYM | Epifactor | FOXO3 | ZMYND11 | 0.825029945 | 1.58E-31 |
THYM | IUPHAR | FOXO3 | BMPR1A | 0.804063076 | 7.18E-29 |
THYM | IUPHAR | FOXO3 | RYK | 0.812864837 | 6.04E-30 |
THYM | IUPHAR | FOXO3 | MAP4K3 | 0.824734638 | 1.73E-31 |
THYM | IUPHAR | FOXO3 | ZMYND11 | 0.825029945 | 1.58E-31 |
THYM | IUPHAR | FOXO3 | PIK3C2A | 0.836336474 | 4.09E-33 |
THYM | Kinase | FOXO3 | BMPR1A | 0.804063076 | 7.18E-29 |
THYM | Kinase | FOXO3 | RYK | 0.812864837 | 6.04E-30 |
THYM | Kinase | FOXO3 | MAP4K3 | 0.824734638 | 1.73E-31 |
THYM | TF | FOXO3 | ZNF391 | 0.805961296 | 4.26E-29 |
THYM | TF | FOXO3 | ATF7 | 0.809847416 | 1.43E-29 |
THYM | TF | FOXO3 | ZZZ3 | 0.816932803 | 1.84E-30 |
THYM | TF | FOXO3 | ZNF615 | 0.82333191 | 2.66E-31 |
THYM | TF | FOXO3 | SETBP1 | 0.83705612 | 3.21E-33 |
THYM | TSG | FOXO3 | BMPR1A | 0.804063076 | 7.18E-29 |
THYM | TSG | FOXO3 | RASSF8 | 0.813102627 | 5.64E-30 |
THYM | TSG | FOXO3 | SASH1 | 0.820416771 | 6.48E-31 |
THYM | TSG | FOXO3 | ZMYND11 | 0.825029945 | 1.58E-31 |
UCS | Cell metabolism gene | FOXO3 | GALNT3 | 0.822835415 | 3.10E-31 |
UCS | Cell metabolism gene | FOXO3 | PGM3 | 0.827207814 | 7.96E-32 |
UCS | Cell metabolism gene | FOXO3 | PIK3C2A | 0.836336474 | 4.09E-33 |
UCS | CGC | FOXO3 | BMPR1A | 0.804063076 | 7.18E-29 |
UCS | CGC | FOXO3 | SETBP1 | 0.83705612 | 3.21E-33 |
UCS | Epifactor | FOXO3 | ZZZ3 | 0.816932803 | 1.84E-30 |
UCS | Epifactor | FOXO3 | ZMYND11 | 0.825029945 | 1.58E-31 |
UCS | IUPHAR | FOXO3 | BMPR1A | 0.804063076 | 7.18E-29 |
UCS | IUPHAR | FOXO3 | RYK | 0.812864837 | 6.04E-30 |
UCS | IUPHAR | FOXO3 | MAP4K3 | 0.824734638 | 1.73E-31 |
UCS | IUPHAR | FOXO3 | ZMYND11 | 0.825029945 | 1.58E-31 |
UCS | IUPHAR | FOXO3 | PIK3C2A | 0.836336474 | 4.09E-33 |
UCS | Kinase | FOXO3 | BMPR1A | 0.804063076 | 7.18E-29 |
UCS | Kinase | FOXO3 | RYK | 0.812864837 | 6.04E-30 |
UCS | Kinase | FOXO3 | MAP4K3 | 0.824734638 | 1.73E-31 |
UCS | TF | FOXO3 | ZNF391 | 0.805961296 | 4.26E-29 |
UCS | TF | FOXO3 | ATF7 | 0.809847416 | 1.43E-29 |
UCS | TF | FOXO3 | ZZZ3 | 0.816932803 | 1.84E-30 |
UCS | TF | FOXO3 | ZNF615 | 0.82333191 | 2.66E-31 |
UCS | TF | FOXO3 | SETBP1 | 0.83705612 | 3.21E-33 |
UCS | TSG | FOXO3 | BMPR1A | 0.804063076 | 7.18E-29 |
UCS | TSG | FOXO3 | RASSF8 | 0.813102627 | 5.64E-30 |
UCS | TSG | FOXO3 | SASH1 | 0.820416771 | 6.48E-31 |
UCS | TSG | FOXO3 | ZMYND11 | 0.825029945 | 1.58E-31 |
UVM | TSG | FOXO3 | SASH1 | 0.811423813 | 7.07E-20 |
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Protein 3D structure Visit iCn3D. |
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Protein-protein interaction networks * Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
Overlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P)) |
* Edge colors based on TCGA cancer types. |
* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P)) |
Cancer type | Translation factor | Interacting protein coding gene | FC | adj.pval |
KICH | FOXO3 | CTNNB1 | 1.35387002426383 | 0.000139892101287842 |
KIRP | FOXO3 | CTNNB1 | 1.44413647030576 | 0.00019507110118866 |
HNSC | FOXO3 | SIRT1 | 1.28806606213356 | 0.000316425336905013 |
KICH | FOXO3 | MYC | 1.19194684236579 | 0.000329077243804932 |
THCA | FOXO3 | EP300 | -1.56308189039603 | 0.00135477973345976 |
THCA | FOXO3 | SIRT3 | 1.21145960969221 | 0.00158404977290443 |
LUSC | FOXO3 | MYC | 1.80145319254842 | 0.00250329335752618 |
LIHC | FOXO3 | MDM2 | -1.57082310333019 | 0.00323738381247511 |
PRAD | FOXO3 | EP300 | 1.28001120737624 | 0.00383473418852013 |
LUSC | FOXO3 | CTNNB1 | -1.53686315879634 | 0.00765883184752251 |
STAD | FOXO3 | MDM2 | -1.99312650485559 | 0.0132303284481168 |
UCEC | FOXO3 | TP53 | 2.03295038376694 | 0.015625 |
CHOL | FOXO3 | SIRT3 | -1.28941965967747 | 0.02734375 |
LUAD | FOXO3 | AKT1 | -4.53714460696341 | 0.0301695351050489 |
KIRP | FOXO3 | CDK2 | -1.46324678446435 | 2.0815059542656e-07 |
KIRC | FOXO3 | MYC | -7.57321539520974 | 3.45880777969452e-10 |
THCA | FOXO3 | SIRT1 | -2.04349883947841 | 4.53128074436648e-06 |
KIRC | FOXO3 | TP53 | -1.43050981150632 | 4.58942580328929e-09 |
THCA | FOXO3 | TP53 | -1.81960143635647 | 6.18215597921662e-07 |
STAD | FOXO3 | CDK2 | -3.08048051920995 | 6.79492950439454e-06 |
COAD | FOXO3 | YWHAZ | 1.56476938178251 | 7.02440738677979e-05 |
KIRP | FOXO3 | MYC | -5.46971831522856 | 9.0546440333128e-05 |
LUAD | FOXO3 | CDK2 | -3.59648992524193 | 9.5344646926303e-05 |
Protein-protein interactors with this translation factor (BIOGRID-3.4.160) |
PPI interactors with FOXO3 |
SMAD3, SMAD4, YWHAZ, USP7, ATG101, YWHAE, YWHAH, YWHAB, PGK1, FKBP4, GBAS, CTNNB1, SIRT3, MYC, H2AFX, BRCA1, RAD17, ATM, SIRT1, CREBBP, FANCD2, STK4, SMAD1, EP300, VDR, NLK, NR1H2, NR1H3, MDM2, MAPK6, SKP2, ELAVL1, BTRC, MAPK1, CDT1, PCNA, IKBKB, CHUK, AKT1, CDK6, ERBB2IP, YWHAQ, Ep300, CEP44, XPO1, TP53, PPP2CB, PLK1, PPP2R4, PPP2R1A, PPP2R1B, FOXO3B, TRRAP, FOXO6, RBL1, CDC27, FOXK1, RB1, PNKP, ARHGEF2, TAF5L, TERT, Akt1, EGFR, CBY1, HNRNPL, EGLN3, ESR2, ARRB1, KIAA1429, SIRT6, BBC3, BICD2, LDLR, HNRNPH1, S100B, YWHAG, |
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Clinically associated variants from ClinVar. |
Gene | Chr | Position | RefSeq | VarSeq | RefSeeq | VarType | Pathogenic | Disease | VarInfo |
FOXO3 | chr6 | 108882830 | C | T | single_nucleotide_variant | Benign | not_provided | SO:0001583|missense_variant | SO:0001583|missense_variant |
FOXO3 | chr6 | 108882843 | C | T | single_nucleotide_variant | Likely_benign | not_provided | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
FOXO3 | chr6 | 108882915 | C | T | single_nucleotide_variant | Benign | not_provided | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
FOXO3 | chr6 | 108882994 | A | T | single_nucleotide_variant | other | Choroid_plexus_carcinoma | SO:0001587|nonsense | SO:0001587|nonsense |
FOXO3 | chr6 | 108908518 | G | T | single_nucleotide_variant | Benign | not_provided | SO:0001627|intron_variant | SO:0001627|intron_variant |
FOXO3 | chr6 | 108984735 | G | A | single_nucleotide_variant | other | Medulloblastoma | SO:0001587|nonsense | SO:0001587|nonsense |
FOXO3 | chr6 | 108984783 | G | A | single_nucleotide_variant | Benign | not_provided | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
FOXO3 | chr6 | 108985057 | G | A | single_nucleotide_variant | Benign | not_provided | SO:0001583|missense_variant | SO:0001583|missense_variant |
FOXO3 | chr6 | 108985221 | G | A | single_nucleotide_variant | Benign | not_provided | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
FOXO3 | chr6 | 108985530 | C | T | single_nucleotide_variant | Likely_benign | not_provided | SO:0001819|synonymous_variant | SO:0001819|synonymous_variant |
FOXO3 | chr6 | 109000742 | A | G | single_nucleotide_variant | Benign | not_provided | SO:0001627|intron_variant | SO:0001627|intron_variant |
FOXO3 | chr6 | 109003321 | T | C | single_nucleotide_variant | Benign | not_provided | SO:0001624|3_prime_UTR_variant | SO:0001624|3_prime_UTR_variant |
nsSNVs with sample frequency (size of circle) from TCGA 33 cancers. |
SNVs and Indels |
Gene | Cancer type | Chromosome | Start | End | RefSeeq | MutSeq | Mutation type | AAchange | # samples |
FOXO3 | BLCA | chr6 | 108985092 | 108985092 | C | G | Silent | 20 | |
FOXO3 | CESC | chr6 | 108984910 | 108984910 | C | T | Missense_Mutation | p.P292S | 6 |
FOXO3 | UVM | chr6 | 108985561 | 108985561 | G | A | Missense_Mutation | p.V509M | 3 |
FOXO3 | HNSC | chr6 | 108984767 | 108984767 | G | C | Missense_Mutation | p.G244A | 3 |
FOXO3 | PAAD | chr6 | 108985303 | 108985303 | C | A | Missense_Mutation | p.L423M | 3 |
FOXO3 | PAAD | chr6 | 108984662 | 108984662 | C | T | Missense_Mutation | p.S209F | 3 |
FOXO3 | PAAD | chr6 | 108984928 | 108984928 | C | T | Missense_Mutation | p.R298C | 3 |
FOXO3 | ESCA | chr6 | 108882886 | 108882886 | A | C | Missense_Mutation | p.N159H | 3 |
FOXO3 | PAAD | chr6 | 108985053 | 108985053 | T | C | Silent | p.D339D | 3 |
FOXO3 | ESCA | chr6 | 108985092 | 108985092 | C | G | Silent | p.A352 | 3 |
FOXO3 | STAD | chr6 | 108985242 | 108985242 | G | A | Silent | p.S402S | 2 |
FOXO3 | LIHC | chr6 | 108986045 | 108986045 | G | - | Frame_Shift_Del | p.W670fs | 2 |
FOXO3 | CESC | chr6 | 108985139 | 108985139 | G | A | Missense_Mutation | 2 | |
FOXO3 | STAD | chr6 | 108985055 | 108985055 | A | G | Missense_Mutation | p.D340G | 2 |
FOXO3 | BLCA | chr6 | 108984897 | 108984897 | G | A | Silent | p.Q287Q | 2 |
FOXO3 | PAAD | chr6 | 108984662 | 108984662 | C | T | Missense_Mutation | 2 | |
FOXO3 | STAD | chr6 | 108985299 | 108985299 | G | A | Silent | p.S421S | 2 |
FOXO3 | LUAD | chr6 | 108985039 | 108985039 | G | A | Missense_Mutation | p.E335K | 2 |
FOXO3 | PAAD | chr6 | 108984928 | 108984928 | C | T | Missense_Mutation | 2 | |
FOXO3 | PAAD | chr6 | 108985303 | 108985303 | C | A | Missense_Mutation | 2 | |
FOXO3 | SKCM | chr6 | 108985310 | 108985310 | C | T | Missense_Mutation | p.S425F | 2 |
FOXO3 | STAD | chr6 | 108882982 | 108882982 | G | A | Missense_Mutation | 2 | |
FOXO3 | STAD | chr6 | 108882982 | 108882982 | G | A | Missense_Mutation | p.V191M | 2 |
FOXO3 | SKCM | chr6 | 108985241 | 108985241 | C | T | Missense_Mutation | p.S402L | 2 |
FOXO3 | KIRP | chr6 | 108883003 | 108883003 | G | T | Missense_Mutation | 2 | |
FOXO3 | LUAD | chr6 | 108984932 | 108984932 | G | T | Missense_Mutation | p.S299I | 2 |
FOXO3 | UCEC | chr6 | 108984839 | 108984839 | C | T | Missense_Mutation | p.A268V | 2 |
FOXO3 | ESCA | chr6 | 108984758 | 108984758 | G | C | Missense_Mutation | p.G241A | 2 |
FOXO3 | STAD | chr6 | 108985139 | 108985139 | G | A | Missense_Mutation | p.R368Q | 2 |
FOXO3 | UCEC | chr6 | 108985322 | 108985322 | C | A | Missense_Mutation | p.S429Y | 2 |
FOXO3 | LIHC | chr6 | 108984701 | 108984701 | G | - | Frame_Shift_Del | p.R222fs | 2 |
FOXO3 | BLCA | chr6 | 108985341 | 108985341 | C | T | Silent | p.F435F | 2 |
FOXO3 | UCEC | chr6 | 108985779 | 108985779 | A | G | Silent | p.Q581 | 2 |
FOXO3 | BRCA | chr6 | 108984960 | 108984964 | CTTCC | - | Frame_Shift_Del | p.D308fs | 2 |
FOXO3 | ESCA | chr6 | 108882886 | 108882886 | A | C | Missense_Mutation | 1 | |
FOXO3 | READ | chr6 | 108883024 | 108883024 | G | A | Missense_Mutation | p.G205S | 1 |
FOXO3 | BLCA | chr6 | 108882525 | 108882525 | G | A | Silent | p.P38P | 1 |
FOXO3 | SKCM | chr6 | 108984759 | 108984759 | G | A | Silent | p.G241G | 1 |
FOXO3 | OV | chr6 | 108989306 | 108989306 | G | T | Missense_Mutation | p.D68Y | 1 |
FOXO3 | GBM | chr6 | 108985059 | 108985059 | G | A | Silent | 1 | |
FOXO3 | READ | chr6 | 108985058 | 108985058 | C | T | Missense_Mutation | p.A341V | 1 |
FOXO3 | SARC | chr6 | 108882511 | 108882511 | C | - | Frame_Shift_Del | p.P34fs | 1 |
FOXO3 | UVM | chr6 | 108882570 | 108882570 | C | T | Silent | p.A53A | 1 |
FOXO3 | LIHC | chr6 | 108882978 | 108882978 | T | C | Silent | 1 | |
FOXO3 | SKCM | chr6 | 108984964 | 108984964 | C | T | Missense_Mutation | p.R310C | 1 |
FOXO3 | HNSC | chr6 | 108985068 | 108985068 | G | A | Silent | 1 | |
FOXO3 | SARC | chr6 | 108984699 | 108984699 | G | T | Missense_Mutation | 1 | |
FOXO3 | BLCA | chr6 | 108985226 | 108985226 | C | G | Missense_Mutation | p.P397R | 1 |
FOXO3 | CHOL | chr6 | 108985269 | 108985269 | C | T | Silent | p.S411S | 1 |
FOXO3 | SKCM | chr6 | 108985383 | 108985383 | G | T | Missense_Mutation | p.Q449H | 1 |
FOXO3 | HNSC | chr6 | 108985068 | 108985068 | G | A | Silent | p.S344S | 1 |
FOXO3 | STAD | chr6 | 108882671 | 108882671 | C | T | Missense_Mutation | p.T87M | 1 |
FOXO3 | SARC | chr6 | 108882648 | 108882650 | CGG | - | In_Frame_Del | p.G83in_frame_del | 1 |
FOXO3 | BLCA | chr6 | 108985224 | 108985224 | C | T | Silent | p.L396L | 1 |
FOXO3 | LUAD | chr6 | 108882901 | 108882901 | G | A | Missense_Mutation | p.D164N | 1 |
FOXO3 | COAD | chr6 | 108984826 | 108984826 | C | A | Missense_Mutation | p.R264S | 1 |
FOXO3 | SKCM | chr6 | 108984980 | 108984980 | C | T | Missense_Mutation | p.S315F | 1 |
FOXO3 | BLCA | chr6 | 108984897 | 108984897 | G | A | Silent | 1 | |
FOXO3 | STAD | chr6 | 108985249 | 108985249 | G | - | Frame_Shift_Del | p.G405fs | 1 |
FOXO3 | BLCA | chr6 | 108985225 | 108985225 | C | T | Missense_Mutation | p.P397S | 1 |
FOXO3 | LUAD | chr6 | 108985148 | 108985148 | A | T | Missense_Mutation | p.D371V | 1 |
FOXO3 | COAD | chr6 | 108984984 | 108984984 | C | T | Silent | p.N316N | 1 |
FOXO3 | KIRC | chr6 | 108985226 | 108985226 | C | T | Missense_Mutation | p.P397L | 1 |
FOXO3 | THYM | chr6 | 108882871 | 108882871 | C | T | Missense_Mutation | 1 | |
FOXO3 | SKCM | chr6 | 108984893 | 108984893 | C | T | Missense_Mutation | p.S286F | 1 |
FOXO3 | BLCA | chr6 | 108985271 | 108985271 | C | G | Missense_Mutation | p.S412C | 1 |
FOXO3 | LUAD | chr6 | 108985209 | 108985209 | G | A | Silent | p.L391L | 1 |
FOXO3 | COAD | chr6 | 108985061 | 108985062 | CT | - | Frame_Shift_Del | p.342_342del | 1 |
FOXO3 | THYM | chr6 | 108882871 | 108882871 | C | T | Missense_Mutation | p.R154W | 1 |
FOXO3 | BLCA | chr6 | 108985224 | 108985224 | C | T | Silent | 1 | |
FOXO3 | KIRP | chr6 | 108985136 | 108985136 | C | T | Missense_Mutation | p.P367L | 1 |
FOXO3 | BLCA | chr6 | 108985623 | 108985623 | C | T | Silent | p.V529V | 1 |
FOXO3 | LUAD | chr6 | 108984958 | 108984958 | G | T | Missense_Mutation | p.D308Y | 1 |
FOXO3 | DLBC | chr6 | 108882915 | 108882915 | C | T | Silent | p.R168R | 1 |
FOXO3 | STAD | chr6 | 108984700 | 108984700 | C | T | Missense_Mutation | p.R222W | 1 |
FOXO3 | UCEC | chr6 | 108985561 | 108985561 | G | T | Missense_Mutation | p.V509L | 1 |
FOXO3 | BLCA | chr6 | 108985225 | 108985225 | C | T | Missense_Mutation | 1 | |
FOXO3 | SKCM | chr6 | 108984918 | 108984918 | C | T | Silent | p.S294S | 1 |
FOXO3 | BLCA | chr6 | 108984779 | 108984779 | G | A | Missense_Mutation | p.R248Q | 1 |
FOXO3 | STAD | chr6 | 108985249 | 108985249 | G | - | Frame_Shift_Del | p.T404fs | 1 |
FOXO3 | BLCA | chr6 | 108985271 | 108985271 | C | G | Missense_Mutation | 1 | |
FOXO3 | LIHC | chr6 | 108985309 | 108985310 | - | C | Frame_Shift_Ins | p.P425fs | 1 |
FOXO3 | SKCM | chr6 | 108984834 | 108984834 | C | T | Silent | p.R266R | 1 |
FOXO3 | BLCA | chr6 | 108985342 | 108985342 | G | A | Missense_Mutation | p.G436R | 1 |
FOXO3 | LUAD | chr6 | 108882648 | 108882650 | CGG | - | In_Frame_Del | p.IG79del | 1 |
FOXO3 | PAAD | chr6 | 108985160 | 108985160 | C | G | Missense_Mutation | p.T375S | 1 |
FOXO3 | BLCA | chr6 | 108985623 | 108985623 | C | T | Silent | 1 | |
FOXO3 | SKCM | chr6 | 108985336 | 108985336 | G | A | Missense_Mutation | p.V434M | 1 |
FOXO3 | LUSC | chr6 | 108985287 | 108985287 | C | A | Silent | p.T417T | 1 |
FOXO3 | PRAD | chr6 | 108984784 | 108984784 | C | T | Missense_Mutation | p.R250W | 1 |
FOXO3 | STAD | chr6 | 108985856 | 108985857 | - | C | Frame_Shift_Ins | p.F607fs | 1 |
FOXO3 | BLCA | chr6 | 108985342 | 108985342 | G | A | Missense_Mutation | 1 | |
FOXO3 | LIHC | chr6 | 108882953 | 108882953 | C | - | Frame_Shift_Del | p.S181fs | 1 |
FOXO3 | SKCM | chr6 | 108985335 | 108985335 | G | A | Silent | p.T433T | 1 |
FOXO3 | LUSC | chr6 | 108985121 | 108985121 | G | T | Missense_Mutation | p.C362F | 1 |
Copy number variation (CNV) of FOXO3 * Click on the image to open the original image in a new window. |
Fusion gene breakpoints (product of the structural variants (SVs)) across FOXO3 * Click on the image to open the UCSC genome browser with custom track showing this image in a new window. |
Fusion genes with this translation factor from FusionGDB2.0. |
FusionGDB2 ID | Disease | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
101518 | GBM | TCGA-32-1970-01A | FOXO3 | chr6 | 108883032 | + | ARMC2 | chr6 | 109274236 | + |
101518 | UVM | TCGA-VD-A8KJ | FOXO3 | chr6 | 108883032 | + | ARMC2 | chr6 | 109215669 | + |
101518 | UVM | TCGA-VD-A8KJ | FOXO3 | chr6 | 108883032 | + | ARMC2 | chr6 | 109215670 | + |
101518 | UVM | TCGA-VD-A8KJ | FOXO3 | chr6 | 108883032 | + | ARMC2 | chr6 | 109220897 | + |
101518 | UVM | TCGA-VD-A8KJ-01A | FOXO3 | chr6 | 108883029 | + | ARMC2 | chr6 | 109215667 | + |
93171 | BRCA | TCGA-AR-A1AU-01A | FOXO3 | chr6 | 108883032 | + | CHD7 | chr8 | 61653818 | + |
94452 | N/A | AK123151 | FOXO3 | chr6 | 108941819 | + | FOXN3 | chr14 | 89622792 | - |
98276 | COAD | TCGA-DM-A0XF-01A | FOXO3 | chr6 | 108883032 | + | GMDS | chr6 | 1961200 | - |
82238 | ACC | TCGA-OR-A5LO-01A | FOXO3 | chr6 | 108883032 | + | LACE1 | chr6 | 108840900 | + |
70719 | GBM | TCGA-06-2561-01A | FOXO3 | chr6 | 108883032 | + | LETMD1 | chr12 | 51442817 | + |
73590 | Non-Cancer | 265N | FOXO3 | chr6 | 108986092 | + | LINC00222 | chr6 | 109080620 | + |
98813 | BRCA | TCGA-AR-A0TS | FOXO3 | chr6 | 108883032 | + | PPP1R9A | chr7 | 94876784 | + |
98813 | BRCA | TCGA-AR-A0TS-01A | FOXO3 | chr6 | 108883032 | + | PPP1R9A | chr7 | 94876785 | + |
95340 | N/A | W95823 | FOXO3 | chr6 | 109003572 | + | TCF4 | chr18 | 52891829 | - |
94647 | N/A | AA460379 | GSN | chr9 | 124094859 | - | FOXO3 | chr6 | 108908770 | - |
94647 | OV | TCGA-25-1319 | HIVEP3 | chr1 | 42094419 | - | FOXO3 | chr6 | 108984657 | + |
94647 | . | . | KMT2A | chr11 | 118353210 | FOXO3 | chr6 | 108984657 | + | |
94647 | . | . | KMT2A | chr11 | 118355029 | FOXO3 | chr6 | 108984657 | + | |
94647 | . | . | KMT2A | chr11 | 118355029 | + | FOXO3 | chr | 108984657 | |
94647 | . | . | KMT2A | chr11 | 118355690 | FOXO3 | chr6 | 108984657 | + | |
94647 | N/A | BF989506 | NEMF | chr14 | 50295816 | - | FOXO3 | chr6 | 108951529 | + |
94647 | N/A | BE149668 | PPM1G | chr2 | 27604640 | + | FOXO3 | chr6 | 108915984 | + |
94647 | BRCA | TCGA-AR-A0TS-01A | PPP1R9A | chr7 | 94855428 | + | FOXO3 | chr6 | 108984658 | + |
94647 | ESCA | TCGA-M9-A5M8 | REPS1 | chr6 | 139308666 | - | FOXO3 | chr6 | 108882288 | + |
94647 | Non-Cancer | 61N | SESN1 | chr6 | 109414997 | - | FOXO3 | chr6 | 108984657 | + |
94653 | OV | TCGA-13-1492 | TSNARE1 | chr8 | 143484464 | - | FOXO3 | chr6 | 108984657 | + |
94647 | N/A | BF432658 | ZNF286B | chr17 | 18569342 | + | FOXO3 | chr6 | 109005972 | - |
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Kaplan-Meier plots with logrank tests of overall survival (OS) |
Cancer type | Translation factor | Coefficent | Hazard ratio | Wald test pval | Likelihool ratio pval | Logrank test pval | # samples |
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Differential gene expression between female and male. (Wilcoxon test, pval<0.05) |
Cancer type | Translation factor | pval | adj.p |
BRCA | FOXO3 | 0.0210640056888735 | 0.59 |
LIHC | FOXO3 | 0.0238794602578902 | 0.64 |
HNSC | FOXO3 | 0.0284570466750984 | 0.74 |
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Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05) |
Cancer type | Translation factor | pval | adj.p |
THCA | FOXO3 | 0.000507237722975085 | 0.017 |
KIRP | FOXO3 | 0.00633682593695489 | 0.2 |
PRAD | FOXO3 | 0.00731806375817114 | 0.23 |
THYM | FOXO3 | 0.011328010274709 | 0.34 |
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Drugs targeting genes involved in this translation factor. (DrugBank Version 5.1.8 2021-05-08) |
UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Diseases associated with this translation factor. (DisGeNet 4.0) |
Disease ID | Disease Name | # PubMeds | Disease source |
C0002152 | Alloxan Diabetes | 2 | CTD_human |
C0011853 | Diabetes Mellitus, Experimental | 2 | CTD_human |
C0038433 | Streptozotocin Diabetes | 2 | CTD_human |
C0007131 | Non-Small Cell Lung Carcinoma | 1 | CTD_human |
C0010606 | Adenoid Cystic Carcinoma | 1 | CTD_human |
C0014072 | Experimental Autoimmune Encephalomyelitis | 1 | CTD_human |
C0024117 | Chronic Obstructive Airway Disease | 1 | CTD_human |
C0028754 | Obesity | 1 | CTD_human |
C0152013 | Adenocarcinoma of lung (disorder) | 1 | CTD_human |
C1527303 | Chronic Airflow Obstruction | 1 | CTD_human |