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Center for Computational Systems Medicine
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Gene Summary

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Translation studies in PubMed

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Exon Skipping Events

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Expression

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Expression Regulation

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Associated Genes

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Protein 3D Structure

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Protein-Protein Interaction

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Mutations

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Prognostic Analysis

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Gender Association

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Age Association

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Related Drugs

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Related Diseases

Translation Factor: RRBP1 (NCBI Gene ID:6238)


Gene Summary

check button Gene Summary
Gene InformationGene Name: RRBP1
Gene ID: 6238
Gene Symbol

RRBP1

Gene ID

6238

Gene Nameribosome binding protein 1
SynonymsES/130|ES130|RRp|hES
Cytomap

20p12.1

Type of Geneprotein-coding
Descriptionribosome-binding protein 1180 kDa ribosome receptor homologES/130-related proteinribosome binding protein 1 homolog 180kDa (dog)ribosome receptor protein
Modification date20200313
UniProtAcc

Q9P2E9


check button Child GO biological process term(s) under GO:0006412
GO IDGO term
GO:0005840Ribosome
GO:0006412Translation


check button Gene ontology of translaction factor with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID


check button Inferred gene age of translation factor.
GeneInferred gene age group among (0 - 67.6], (67.6 - 355.7], (355.7 - 733], (733 - 1119.25], >1119.25
RRBP1(733 - 1119.25]


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Translation Studies in PubMed

check button We searched PubMed using 'RRBP1[title] AND translation [title] AND human.'
GeneTitlePMID
RRBP1La Autoantigen Induces Ribosome Binding Protein 1 (RRBP1) Expression through Internal Ribosome Entry Site (IRES)-Mediated Translation during Cellular Stress Condition27447629


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Exon Skipping Events

check buttonSkipped exons in TCGA and GTEx based on Ensembl gene isoform structure.
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
For more annotations, please visit our ExonSkipDB.
all structure

check button Open reading frame (ORF) analsis of exon skipping events based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ENSTExon skip start (DNA)Exon Skip end (DNA)ORF
ENST000002460431759607517596174In-frame
ENST000003778131759607517596174In-frame
ENST000002460431759657017596654In-frame
ENST000003778131759657017596654In-frame
ENST000002460431759737617597484In-frame
ENST000003778131759737617597484In-frame
ENST000002460431759924017599324In-frame
ENST000003778131759924017599324In-frame
ENST000002460431760027717600373In-frame
ENST000003778131760027717600373In-frame
ENST000002460431760135917601452In-frame
ENST000003778131760135917601452In-frame
ENST000002460431760249917602592In-frame
ENST000003778131760249917602592In-frame
ENST000002460431760522017605313In-frame
ENST000003778131760522017605313In-frame
ENST000002460431760799217608027Frame-shift
ENST000003778131760799217608027Frame-shift
ENST000002460431761619017616309Frame-shift
ENST000003778131761619017616309Frame-shift
ENST000002460431761722117617374In-frame
ENST000003778131761722117617374In-frame
ENST000002460431762244117622564In-frame
ENST000003778131762244117622564In-frame
ENST000002460431762362317623772Frame-shift
ENST000003778131762362317623772Frame-shift
ENST0000037781317639240176411733UTR-3CDS
ENST0000037781317660643176607203UTR-3UTR

check button Exon skipping position in the amino acid sequence.
ENSTExon skip start (DNA)Exon Skip end (DNA)Len(transcript seq)Exon skip start (mRNA)Exon Skip end (mRNA)Len(amino acid seq)Exon skip start (AA)Exon Skip end (AA)
ENST000002460431759607517596174475439524050141013171350
ENST000003778131759607517596174505842564354141013171350
ENST000002460431759657017596654475438683951141012891317
ENST000003778131759657017596654505841724255141012891317
ENST000002460431759737617597484475437603867141012531289
ENST000003778131759737617597484505840644171141012531289
ENST000002460431759924017599324475436763759141012251253
ENST000003778131759924017599324505839804063141012251253
ENST000002460431760027717600373475435803675141011931225
ENST000003778131760027717600373505838843979141011931225
ENST000002460431760135917601452475434153507141011381169
ENST000003778131760135917601452505837193811141011381169
ENST000002460431760249917602592475431483240141010491080
ENST000003778131760249917602592505834523544141010491080
ENST000002460431760522017605313475430553147141010181049
ENST000003778131760522017605313505833593451141010181049
ENST0000024604317617221176173744754218523371410728779
ENST0000037781317617221176173745058248926411410728779
ENST0000024604317622441176225644754206221841410687728
ENST0000037781317622441176225645058236624881410687728

check button Potentially (partially) lost protein functional features of UniProt.
UniProtAccExon skip start (AA)Exon Skip end (AA)Function feature start (AA)Function feature end (AA)Functional feature typeFunctional feature desc.


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Expression


check buttonGene expression level across TCGA pancancer
all structure

check buttonGene expression level across GTEx pantissue
all structure

check buttonExpression level of gene isoforms across TCGA pancancer
all structure

check buttonExpression level of gene isoforms across GTEx pantissue
all structure

check buttonCancer(tissue) type-specific expression level of Translation factor using z-score distriution
all structure

check buttonDifferential expression between tumor and matched normal (in the cancer types with more than 10 matched samples)
all structure
Cancer typeTranslation factorFCadj.pval
KICHRRBP1-4.710474875129860.000287055969238281
KIRCRRBP1-1.424492812770310.00189590326053014
CHOLRRBP1-1.734503845209180.0078125
BLCARRBP1-1.678620333749040.0493659973144531
BRCARRBP1-1.712748250073632.21762214457575e-05


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Expression Regulation


check buttonTranslation factor expression regulation through miRNA binding
Cancer typeGenemiRNATargetScan binding score (Context++ score percentile)CoefficientPvalue


check buttonTranslation factor expression regulation through methylation in the promoter of Translation factor
all structure
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a

check buttonTranslation factor expression regulation through methylation in the gene body of Translation factor (positive regulation)
all structure
Cancer typeGenemethyl group bmethyl group aDEG pvalavg methyl in bavg methyl in aavg exp in bavg exp in a

check buttonTranslation factor expression regulation through copy number variation of Translation factor
all structure
Cancer typeGeneCoefficientPvalue
READRRBP1-0.0453191310.041802175

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Associated Genes


check button Strongly correlated genes belong to cellular important gene groups with RRBP1 (coefficient>0.8, pval<0.05, node color based on FC between tumor and matched normal). Significantly associated important genes in the individual cancer types. * Cell metabolism gene: cell metabolism genes from REACTOME (black edge), IUPHAR: drug target genes from IUPHAR (blue edge), Kinase: human kinase genes (brown edge), CGC: cancer gene census genes (orange edge), TSG: tumor suppresor genes (purple edge), Epifactor: epigenetic factors (light blue edge), TF: transcription factors (green)
all structure
Cancer typeGene groupTranslation factorCorrelated geneCoefficientPvalue
UVMIUPHARRRBP1CTSD0.8027666693.41E-19


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Protein structure


check button Protein 3D structure
Visit iCn3D.


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Protein-Protein Interaction


check button Protein-protein interaction networks
* Overlap between up-regulated DEGs (log2FC<-1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure

check buttonOverlap between down-regulated DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network (center: Translation factor, node: DEGs, edges: weighted by -log2(adj.P))
all structure
check button
* Edge colors based on TCGA cancer types.

check button* Overlap between DEGs (log2FC>1 and adj.P<0.05) and STRING PPI network per cancer (center: Translation factor, node: DEGs, node color: log2FC, edges: weighted by -log2(adj.P))
all structure
Cancer typeTranslation factorInteracting protein coding geneFCadj.pval
HNSCRRBP1HAL-2.023832636725920.000102781329587742
PRADRRBP1COL6A2-1.970032124439710.000160125183544188
BLCARRBP1COL6A2-1.766148638583070.000164031982421875
COADRRBP1CARNS11.473191982834130.00028228759765625
HNSCRRBP1DET11.294475806040410.000333792391984389
KIRPRRBP1CARNS11.184956225931760.000471815001219511
KIRCRRBP1DET1-4.724539458635640.000707497773404709
LUADRRBP1HAL1.231186666422510.000972928521462759
CHOLRRBP1HAL-2.290765967760840.00390625
LIHCRRBP1COL6A11.053285135857860.00576533190924774
BLCARRBP1COL6A1-2.090139002218820.0061798095703125
LIHCRRBP1DET1-1.648991270052060.0388472135404142
LUADRRBP1CARNS11.503682709445850.0474746424607937
BRCARRBP1CARNS11.50599228224881.01563502960982e-13
THCARRBP1DET1-1.128989834049181.24096187709557e-07
KIRCRRBP1HAL-1.029937832027862.39785093662926e-06
BRCARRBP1DET1-1.685286514118432.65458780824788e-13
KIRCRRBP1COL6A1-1.518480469744442.90610936482183e-06


check button Protein-protein interactors with this translation factor (BIOGRID-3.4.160)
PPI interactors with RRBP1
DSTN, Ndc80, ZWINT, CUL3, NDUFA7, CDV3, SCP2, RPS19, ILF3, PPIF, HNRNPM, MRPL53, SRPRB, PIN4, RBMS1, KLF5, RAB8A, CHMP2A, PQBP1, RPL38, HSPA1L, HSBP1, IQCB1, SMAD9, PRKD2, MAP1LC3A, KIAA0101, TARDBP, LGR4, VCP, CUL7, NTRK1, MORC2, RBM8A, BUD31, SMNDC1, EWSR1, TMPO, Eef1a1, Ktn1, Mad2l2, Cdk5rap2, FOXG1, FOXL1, PES1, EMILIN1, EEF1D, KLHL2, TSPYL6, STYX, DLST, PDHA1, TRIM25, YAP1, HNRNPL, ARMC8, APOE, EFTUD2, AGR2, RECQL4, MB21D1, MYC, CDK9, HIST1H4A, HIST1H2BB, BET1, CANX, RAB11A, RAB9A, RPS6, HIST1H3A, FBL, TOMM22, AURKAIP1, KIAA1429, PHB, DISC1, USP14, NR2C2, NHLRC2, CPT1A, HADHB, PGAM5, TOMM5, VDAC2, RHBDD1, RHBDF2, BIRC3, STAU1, WWP2, BRD7, FAM105A, MATR3, SQSTM1, PLEKHA4, HCVgp1, MAP3K14, CEP104, SLC25A6, PTPRB, DCC, MKI67, ATRX, MNX1, RPL10A, RPL8, ANK2, PTPRS, CEP55, SLC44A4, ZNF518A, ZNF562, ZNF513, METTL2A, TMEM87B, FYCO1, BOC, CFAP97, SMARCA4, PLEC, ERICH5, HIST1H2BH, ZNF625, PIK3R4, RAB3GAP2, BIRC6, MYH15, PATL2, DNAH5, E, M, nsp4, nsp6, ORF14, ORF7a, ORF7b, ORF8, S, ST7, LRRC31, FKBP8, GRSF1, MTCH2, PTPN1, SLC25A46, HNRNPH1, LRRC59, E5b, BRD4, Apc2, FBP1, DNAJC1, DNAJC14, DNAJC16, DNAJC25, SEC63, DNAJC2, SPNS1, MAP3K15, DDX58, TRIM7, nsp2, UFL1, DDRGK1, ATP2A1, B3GAT1, BCAP31, CKAP4, DERL1, DHFRL1, ELOVL5, EMD, ERGIC2, GJD3, HSD17B11, HSD3B7, METTL7A, PXMP2, RAB3B, RAB5A, REEP5, RPL31, RPN1, RPN2, SEC61B, SEC62, SERBP1, SSR1, STIM1, STX7, FZR1, WDR5, NAA40, SYNJ2BP, FEM1A, KRT80, DTX3, BTF3, ESR1, ANPEP, TMPRSS11B, CLEC4E, FGD5, CALCOCO2, SIRT6, Wdr82, RB1CC1,


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Mutations


check button Clinically associated variants from ClinVar.
GeneChrPositionRefSeqVarSeqRefSeeqVarTypePathogenicDiseaseVarInfo
RRBP1chr2017595470CTsingle_nucleotide_variantBenignnot_providedSO:0001583|missense_variantSO:0001583|missense_variant
RRBP1chr2017596582CTsingle_nucleotide_variantLikely_benignnot_providedSO:0001583|missense_variantSO:0001583|missense_variant
RRBP1chr2017596586CTsingle_nucleotide_variantBenignnot_providedSO:0001819|synonymous_variantSO:0001819|synonymous_variant
RRBP1chr2017597369GAsingle_nucleotide_variantBenignnot_providedSO:0001627|intron_variantSO:0001627|intron_variant
RRBP1chr2017597382CTsingle_nucleotide_variantBenignnot_providedSO:0001583|missense_variantSO:0001583|missense_variant
RRBP1chr2017600950CTsingle_nucleotide_variantLikely_benignnot_providedSO:0001819|synonymous_variantSO:0001819|synonymous_variant
RRBP1chr2017600992GAsingle_nucleotide_variantBenignnot_providedSO:0001819|synonymous_variantSO:0001819|synonymous_variant
RRBP1chr2017602103CTsingle_nucleotide_variantBenignnot_providedSO:0001819|synonymous_variantSO:0001819|synonymous_variant
RRBP1chr2017602364GAsingle_nucleotide_variantBenignnot_providedSO:0001583|missense_variantSO:0001583|missense_variant
RRBP1chr2017606220CTsingle_nucleotide_variantBenignnot_providedSO:0001819|synonymous_variantSO:0001819|synonymous_variant
RRBP1chr2017608139GAsingle_nucleotide_variantBenignnot_providedSO:0001627|intron_variantSO:0001627|intron_variant
RRBP1chr2017610512CTsingle_nucleotide_variantBenignnot_providedSO:0001583|missense_variantSO:0001583|missense_variant
RRBP1chr2017610604CTsingle_nucleotide_variantLikely_benignnot_providedSO:0001819|synonymous_variantSO:0001819|synonymous_variant
RRBP1chr2017617342GCsingle_nucleotide_variantLikely_benignnot_providedSO:0001819|synonymous_variantSO:0001819|synonymous_variant
RRBP1chr2017622495TCsingle_nucleotide_variantBenignnot_providedSO:0001583|missense_variantSO:0001583|missense_variant
RRBP1chr2017622562GAsingle_nucleotide_variantBenignnot_providedSO:0001819|synonymous_variantSO:0001819|synonymous_variant
RRBP1chr2017623770GAsingle_nucleotide_variantLikely_benignnot_providedSO:0001583|missense_variantSO:0001583|missense_variant
RRBP1chr2017640801CTsingle_nucleotide_variantBenignnot_providedSO:0001583|missense_variantSO:0001583|missense_variant


check button nsSNVs with sample frequency (size of circle) from TCGA 33 cancers.
all structure


check button SNVs and Indels
GeneCancer typeChromosomeStartEndRefSeeqMutSeqMutation typeAAchange# samples
RRBP1CESCchr201763986417639864TCMissense_Mutation7
RRBP1ESCAchr201763984517639845CTSilent7
RRBP1KICHchr201763982017639820CTMissense_Mutation6
RRBP1ESCAchr201763986717639867CTMissense_Mutation6
RRBP1LIHCchr201763983717639837CTMissense_Mutation6
RRBP1SARCchr201763988717639887GTSilent5
RRBP1ACCchr201762247917622479GAMissense_Mutationp.A283V4
RRBP1LIHCchr201763966817639668AGSilent3
RRBP1LIHCchr201762250517622505T-Frame_Shift_Delp.K707fs3
RRBP1ESCAchr201763994117639941ACSilent3
RRBP1LIHCchr201763982017639820C-Frame_Shift_Delp.A445fs3
RRBP1ESCAchr201761727317617273CTMissense_Mutationp.M329I3
RRBP1TGCTchr201763983417639834TCMissense_Mutation3
RRBP1LUADchr201764086417640864GANonsense_Mutationp.R97*3
RRBP1KICHchr201763978617639786TGMissense_Mutation3
RRBP1HNSCchr201764058017640580TGSilent3
RRBP1CESCchr201763981517639815CTSilent3
RRBP1BRCAchr201764058217640582TGMissense_Mutationp.T191P3
RRBP1LIHCchr201763971417639714TCMissense_Mutation3
RRBP1ESCAchr201764108017641080TAMissense_Mutationp.I25F3
RRBP1STADchr201760250017602500CAMissense_Mutationp.Q647H2
RRBP1UCECchr201760233817602338GTSilentp.S6742
RRBP1CESCchr201764021617640216CTMissense_Mutation2
RRBP1PCPGchr201761423317614233GAMissense_Mutation2
RRBP1UVMchr201763929517639295TCMissense_Mutation2
RRBP1STADchr201760139017601390CAMissense_Mutationp.K726N2
RRBP1ESCAchr201764110717641107CANonsense_Mutationp.G16*2
RRBP1UCECchr201760524817605248CAMissense_Mutationp.E607D2
RRBP1LIHCchr201759612217596122GAMissense_Mutation2
RRBP1LUADchr201760035917600359CTSilentp.T1198T2
RRBP1KICHchr201763985017639850CTMissense_Mutation2
RRBP1UCECchr201760619817606198CTMissense_Mutationp.E572K2
RRBP1LIHCchr201763980417639804TCMissense_Mutation2
RRBP1CESCchr201763930617639306GTMissense_Mutation2
RRBP1CESCchr201760034717600347CAMissense_Mutation2
RRBP1UVMchr201763929517639295TCMissense_Mutationp.K620E2
RRBP1LIHCchr201763945217639452C-Frame_Shift_Delp.G567fs2
RRBP1STADchr201760138517601385CTMissense_Mutationp.G728D2
RRBP1UCECchr201761630517616305CTMissense_Mutationp.R348Q2
RRBP1LIHCchr201763951617639516TAMissense_Mutation2
RRBP1STADchr201761734117617341CTMissense_Mutationp.G307R2
RRBP1THYMchr201760213617602136CTSilent2
RRBP1UCECchr201762250617622506TGMissense_Mutationp.K274T2
RRBP1STADchr201764114117641141GASilent2
RRBP1LIHCchr201764050317640503T-Frame_Shift_Delp.N217fs2
RRBP1LIHCchr201763979017639790CTMissense_Mutation2
RRBP1UCECchr201762377317623773CTSplice_Sitee3-12
RRBP1CESCchr201763969917639699GAMissense_Mutation2
RRBP1PRADchr201762255517622555TANonsense_Mutationp.K691*2
RRBP1STADchr201764085217640852GAMissense_Mutation2
RRBP1UCECchr201759484017594840CTMissense_Mutationp.G974D2
RRBP1BRCAchr201763983417639834TCMissense_Mutationp.K440R2
RRBP1LUADchr201760097217600972ACMissense_Mutationp.L1184R2
RRBP1STADchr201764100417641004GAMissense_Mutationp.A50V2
RRBP1ESCAchr201764048917640489CAMissense_Mutation2
RRBP1KIRCchr201764112217641122CTMissense_Mutationp.V11I2
RRBP1UCECchr201763925717639257CAMissense_Mutationp.K202N2
RRBP1UCECchr201759664717596647GAMissense_Mutationp.T859M2
RRBP1BRCAchr201764065017640650GTMissense_Mutationp.A168D2
RRBP1STADchr201764087517640875GCMissense_Mutationp.T93S2
RRBP1THYMchr201760828917608289GAMissense_Mutation2
RRBP1ESCAchr201759925617599256GASilent2
RRBP1UCECchr201763942817639428AGSilentp.S5752
RRBP1CESCchr201759657617596576CGMissense_Mutation2
RRBP1LIHCchr201764080817640808G-Frame_Shift_Delp.P115fs2
RRBP1ESCAchr201763925617639256TANonsense_Mutationp.K633*2
RRBP1HNSCchr201760095017600950CTSilentp.S1191S2
RRBP1UCECchr201759740417597404CTSilentp.A8472
RRBP1BRCAchr201764100617641006CTMissense_Mutationp.M49I2
RRBP1UCECchr201763966917639669GAMissense_Mutationp.A495V2
RRBP1LIHCchr201760144217601442AGMissense_Mutation2
RRBP1STADchr201764085217640852GAMissense_Mutationp.R101W2
RRBP1ESCAchr201764048917640489CAMissense_Mutationp.A222S2
RRBP1THYMchr201760818017608180GAMissense_Mutation2
RRBP1UCECchr201760035917600359CTSilentp.T7652
RRBP1SKCMchr201761411617614116GASilentp.L867L2
RRBP1KIRCchr201759544317595443TCMissense_Mutationp.Q1378R2
RRBP1UCECchr201764097017640970CAMissense_Mutationp.K61N2
RRBP1ACCchr201761731217617312CASilentp.V316V2
RRBP1STADchr201760799517607995AGSilentp.T554T2
RRBP1STADchr201761416117614161GAMissense_Mutationp.R419W2
RRBP1UCECchr201760099817600998CTSilentp.K7422
RRBP1CESCchr201762249217622492CTMissense_Mutation2
RRBP1PAADchr201761057017610570GAMissense_Mutationp.R883C2
RRBP1SKCMchr201761411717614117GASilentp.V866V2
RRBP1ESCAchr201764108017641080TAMissense_Mutation2
RRBP1UCSchr201764099217640992TCMissense_Mutationp.H54R2
RRBP1ACCchr201760236017602360GTMissense_Mutationp.P667Q2
RRBP1COADchr201763990917639910-CIntron.2
RRBP1ESCAchr201761727317617273CTMissense_Mutationp.M762I1
RRBP1HNSCchr201761050217610502GASilent1
RRBP1THYMchr201760828917608289GAMissense_Mutationp.R497C1
RRBP1HNSCchr201760095017600950CTSilentp.S758S1
RRBP1LIHCchr201761424617614246CAMissense_Mutation1
RRBP1BLCAchr201759927317599273CTMissense_Mutation1
RRBP1LUADchr201760035917600359CTSilentp.T765T1
RRBP1SKCMchr201761411717614117GASilentp.V433V1
RRBP1BLCAchr201760240217602402AGMissense_Mutationp.L1086P1
RRBP1SKCMchr201764080217640802GASilentp.I117I1
RRBP1CESCchr201759658317596583GASilentp.A13131
RRBP1SKCMchr201762374017623740GAMissense_Mutationp.P649S1
RRBP1ESCAchr201759925617599256GASilentp.S815S1
RRBP1STADchr201764080817640809-GFrame_Shift_Insp.P115fs1
RRBP1KIRCchr201764077117640771GAMissense_Mutationp.P128S1
RRBP1LIHCchr201761619817616198CANonsense_Mutationp.E817*1
RRBP1LIHCchr201761055217610552G-Frame_Shift_Delp.R889fs1
RRBP1BLCAchr201760616617606166CTSilentp.V1015V1
RRBP1LUADchr201761623017616230CAMissense_Mutationp.R806L1
RRBP1SARCchr201761722317617223TAMissense_Mutation1
RRBP1COADchr201764026917640270-CIntron.1
RRBP1GBMchr201763934917639349AGMissense_Mutation1
RRBP1THCAchr201763935217639352CANonsense_Mutationp.E601*1
RRBP1STADchr201764114117641141GASilentp.Y4Y1
RRBP1HNSCchr201761053817610538GASilent1
RRBP1THYMchr201760818017608180GAMissense_Mutationp.A533V1
RRBP1HNSCchr201762369517623695CTMissense_Mutationp.E231K1
RRBP1LIHCchr201764086617640866AGMissense_Mutation1
RRBP1BLCAchr201763930917639309CAMissense_Mutation1
RRBP1CESCchr201764001317640013TCSilent1
RRBP1LUADchr201760240717602407CTSilentp.E651E1
RRBP1SKCMchr201764067217640672GANonsense_Mutationp.Q161X1
RRBP1BLCAchr201760240117602401CASilentp.L1086L1
RRBP1CESCchr201764049417640494CTMissense_Mutation1
RRBP1PCPGchr201761423317614233GAMissense_Mutationp.R395W1
RRBP1SKCMchr201764096017640960TCMissense_Mutationp.T65A1
RRBP1CESCchr201760619917606199GTSilentp.I10041
RRBP1SKCMchr201759613817596138CTMissense_Mutationp.E1330K1
RRBP1ESCAchr201764075517640755GAMissense_Mutationp.A133V1
RRBP1STADchr201762254617622547-GGTCFrame_Shift_Insp.P261fs1
RRBP1KIRCchr201763947517639475C-Frame_Shift_Delp.V560fs1
RRBP1UVMchr201763929517639295TCMissense_Mutationp.K190E1
RRBP1LIHCchr201763925117639251T-Frame_Shift_Delp.K634fs1
RRBP1ACCchr201762247917622479GAMissense_Mutationp.A716V1
RRBP1BLCAchr201759927317599273CTMissense_Mutationp.E810K1
RRBP1SARCchr201764080817640808G-Frame_Shift_Del1
RRBP1COADchr201764030017640300C-Intron.1
RRBP1STADchr201761725217617252GASilentp.H336H1
RRBP1GBMchr201763943817639438CTMissense_Mutation1
RRBP1THYMchr201763989417639894TCMissense_Mutation1
RRBP1ESCAchr201761417717614177CTSilent1
RRBP1STADchr201761425717614257GASplice_Sitep.Q820_splice1
RRBP1HNSCchr201761417017614170CTMissense_Mutation1
RRBP1BLCAchr201760097917600979CTMissense_Mutation1
RRBP1LUADchr201762253817622538CTSilentp.A263A1
RRBP1SKCMchr201763969117639691GANonsense_Mutationp.Q488*1
RRBP1BLCAchr201763929117639291TAMissense_Mutationp.Q621L1
RRBP1PCPGchr201761423317614233GAMissense_Mutationp.R828W1
RRBP1SKCMchr201764088517640885GCMissense_Mutationp.P90A1
RRBP1COADchr201759738317597383GASilentp.P854P1
RRBP1SKCMchr201764067217640672GANonsense_Mutationp.Q161*1
RRBP1ESCAchr201761417717614177CTSilentp.R413R1
RRBP1STADchr201761425717614257GANonsense_Mutation1
RRBP1KIRPchr201760214717602148GT-Frame_Shift_Delp.691_691del1
RRBP1THYMchr201760136617601366GTSilentp.L734L1
RRBP1LIHCchr201764067117640671TCMissense_Mutation1
RRBP1LIHCchr201763941717639417T-Frame_Shift_Delp.K579fs1
RRBP1ACCchr201761731217617312CASilentp.V749V1
RRBP1BLCAchr201763930917639309CAMissense_Mutationp.S185I1
RRBP1LUADchr201760240717602407CTSilentp.E1084E1
RRBP1SARCchr201760236317602363TCMissense_Mutation1
RRBP1COADchr201759745117597451CTMissense_Mutationp.V832I1
RRBP1GBMchr201764097017640970CTSilent1
RRBP1THYMchr201764102317641023TCMissense_Mutation1
RRBP1STADchr201763935017639351CT-Frame_Shift_Delp.E601fs1
RRBP1HNSCchr201759930717599307TCSilentp.L1231L1
RRBP1KICHchr201763981617639816TGMissense_Mutation1
RRBP1LIHCchr201761619817616198CANonsense_Mutationp.E384X1
RRBP1BLCAchr201760256817602568GCMissense_Mutation1
RRBP1CESCchr201763985617639856CTMissense_Mutation1
RRBP1LUSCchr201764108517641085ACMissense_Mutationp.I23S1
RRBP1SKCMchr201763969217639692GASilentp.N487N1
RRBP1BLCAchr201759927317599273CTMissense_Mutationp.E1243K1
RRBP1CESCchr201759658317596583GASilentp.A1313A1
RRBP1PRADchr201761623117616231GAMissense_Mutationp.R373W1
RRBP1COADchr201760034917600349CTMissense_Mutationp.E769K1
RRBP1SKCMchr201761737617617377-GSplice_Site1
RRBP1ESCAchr201763925617639256TANonsense_Mutationp.K203X1
RRBP1TGCTchr201764006717640067GTSilent1
RRBP1KIRPchr201764003117640031CASilent1
RRBP1UCECchr201760099817600998CTSilentp.K742K1
RRBP1LIHCchr201764018017640180C-Frame_Shift_Delp.A325fs1
RRBP1ACCchr201761726017617260GTSilentp.R767R1
RRBP1BLCAchr201760097917600979CTMissense_Mutationp.E749K1
RRBP1LUADchr201760819617608196CGMissense_Mutationp.E961Q1
RRBP1SARCchr201759929117599291GTMissense_Mutation1
RRBP1DLBCchr201760257117602571AGMissense_Mutationp.C624R1
RRBP1GBMchr201760829717608297GAMissense_Mutation1
RRBP1SKCMchr201760218217602182GAMissense_Mutationp.S1112F1
RRBP1STADchr201759938817599388GATranslation_Start_Site1
RRBP1HNSCchr201761053817610538GASilentp.H893H1
RRBP1LIHCchr201764063617640636CAMissense_Mutationp.A173S1
RRBP1BLCAchr201762369517623695CTMissense_Mutation1
RRBP1CESCchr201760619917606199GTSilent1
RRBP1LUSCchr201759483917594839GASilentp.G974G1
RRBP1SKCMchr201759738417597384GAMissense_Mutationp.P1287L1
RRBP1BLCAchr201763930917639309CAMissense_Mutationp.S615I1
RRBP1CESCchr201764044117640441GANonsense_Mutation1
RRBP1PRADchr201762255517622555TANonsense_Mutationp.K258X1
RRBP1COADchr201760142317601423GASilentp.S715S1
RRBP1LGGchr201762247717622477CTMissense_Mutationp.A717T1
RRBP1UCECchr201759740417597404CTSilentp.A847A1
RRBP1ACCchr201763998017639980T-Frame_Shift_Delp.K391fs1
RRBP1BLCAchr201760256817602568GCMissense_Mutationp.L625V1
RRBP1SARCchr201760236317602363TCMissense_Mutationp.H1099R1
RRBP1ESCAchr201759925617599256GASilentp.S12481
RRBP1STADchr201764080717640808-GFrame_Shift_Insp.I116fs1
RRBP1GBMchr201759665217596652CASilent1
RRBP1THYMchr201760236217602362GTMissense_Mutation1
RRBP1SKCMchr201759661517596615CTMissense_Mutationp.D1303N1
RRBP1STADchr201760101217601012GAMissense_Mutationp.R738W1
RRBP1HNSCchr201761417017614170CTMissense_Mutationp.E849K1
RRBP1LIHCchr201759611217596112TCSilentp.L905L1
RRBP1BLCAchr201761727717617277CTMissense_Mutation1
RRBP1LUSCchr201761050117610501CANonsense_Mutationp.E473*1
RRBP1SKCMchr201763951817639518GASilentp.I545I1
RRBP1BLCAchr201760097917600979CTMissense_Mutationp.E1182K1
RRBP1CESCchr201762249217622492CTMissense_Mutationp.E712K1
RRBP1LIHCchr201764027017640270C-Frame_Shift_Delp.A295fs1
RRBP1COADchr201760211017602110GAMissense_Mutationp.A703V1
RRBP1ESCAchr201761411317614113GANonsense_Mutationp.Q435X1
RRBP1TGCTchr201763987617639876TGMissense_Mutation1
RRBP1LGGchr201760258417602584CTSilentp.S1052S1
RRBP1LIHCchr201763950717639507T-Frame_Shift_Delp.K549fs1
RRBP1LIHCchr201763980317639803CTSilent1
RRBP1BLCAchr201764097617640976CGMissense_Mutation1
RRBP1SKCMchr201761737617617377-GSplice_Site.1
RRBP1ESCAchr201760820917608212TCTC-Frame_Shift_Delp.R956fs1
RRBP1HNSCchr201760257117602571AGMissense_Mutation1
RRBP1THYMchr201763949217639492GCMissense_Mutation1
RRBP1SKCMchr201761054917610549CTMissense_Mutationp.E890K1
RRBP1STADchr201760138017601380CTMissense_Mutationp.A730T1
RRBP1LIHCchr201759612017596120CAMissense_Mutationp.G903C1
RRBP1BLCAchr201762247117622471CTMissense_Mutation1
RRBP1CESCchr201760210317602103CTSilent1
RRBP1OVchr201755416817554168CGMissense_Mutationp.V582L1
RRBP1SKCMchr201763960117639601GANonsense_Mutationp.Q518*1
RRBP1BLCAchr201760256817602568GCMissense_Mutationp.L1058V1
RRBP1CESCchr201763969917639699GAMissense_Mutationp.A485V1
RRBP1LIHCchr201764047617640476G-Frame_Shift_Delp.P226fs1
RRBP1READchr201764031617640316C-Intron.1
RRBP1COADchr201760815417608154CTMissense_Mutationp.V542I1
RRBP1STADchr201763935017639351CT-Frame_Shift_Del1
RRBP1ESCAchr201759925617599256GASilentp.S1248S1
RRBP1TGCTchr201763982717639827GASilent1
RRBP1LGGchr201760817117608171GAMissense_Mutationp.A969V1
RRBP1LIHCchr201763981317639813T-Frame_Shift_Delp.N447fs1
RRBP1HNSCchr201762368917623689CTMissense_Mutationp.E666K1
RRBP1LIHCchr201762365117623651AGSilent1
RRBP1BLCAchr201759550517595505CGMissense_Mutation1
RRBP1LUADchr201762253817622538CTSilentp.A696A1
RRBP1SKCMchr201762374017623740GAMissense_Mutationp.P216S1
RRBP1ESCAchr201761411317614113GANonsense_Mutationp.Q868*1
RRBP1SKCMchr201760138217601382GAMissense_Mutationp.A1162V1
RRBP1SKCMchr201762247917622479GTMissense_Mutationp.A716E1
RRBP1STADchr201761729117617291CTSilentp.T323T1
RRBP1KIRCchr201764102417641024GTSilentp.A43A1
RRBP1LIHCchr201764067117640671TCMissense_Mutationp.Q161R1
RRBP1BLCAchr201764092417640924CGMissense_Mutation1
RRBP1OVchr201760252117602521TCSilentp.E6401
RRBP1LIHCchr201764097117640971T-Frame_Shift_Delp.K62fs1
RRBP1BLCAchr201760095817600958CTMissense_Mutationp.E1189K1
RRBP1COADchr201761412917614129GASilentp.F429F1
RRBP1STADchr201761425717614257GANonsense_Mutationp.Q387X1
RRBP1ESCAchr201760820917608212TCTC-Frame_Shift_Delp.ER955fs1
RRBP1TGCTchr201761726917617269CTMissense_Mutationp.A764T1
RRBP1LGGchr201763926917639271CTT-In_Frame_Delp.K628del1
RRBP1STADchr201761060417610604CTSilentp.A438A1
RRBP1HNSCchr201762368917623689CTMissense_Mutation1
RRBP1THYMchr201759928217599282CTMissense_Mutation1
RRBP1LIHCchr201763984617639846TGMissense_Mutation1
RRBP1BLCAchr201760240117602401CASilent1
RRBP1LUADchr201763946317639463TAMissense_Mutationp.T564S1
RRBP1SKCMchr201760138217601382GAMissense_Mutationp.A729V1
RRBP1OVchr201763967617639676CTMissense_Mutationp.E493K1
RRBP1SKCMchr201759551817595518ATMissense_Mutationp.L1353Q1
RRBP1CESCchr201764021617640216CTMissense_Mutationp.E313K1
RRBP1SKCMchr201761416117614161GAMissense_Mutationp.R852W1
RRBP1ESCAchr201760820917608212TCTC-Frame_Shift_Del1
RRBP1STADchr201761060417610604CTMissense_Mutationp.R24H1
RRBP1KIRCchr201760818817608188CASilentp.L530L1
RRBP1LIHCchr201759612217596122GAMissense_Mutationp.A902V1
RRBP1BLCAchr201764097617640976CGMissense_Mutationp.K59N1
RRBP1LIHCchr201761733817617338C-Frame_Shift_Delp.E741fs1
RRBP1BLCAchr201763958617639586CTMissense_Mutationp.E523K1
RRBP1SARCchr201760215617602156GTMissense_Mutation1
RRBP1COADchr201761619917616199CTSilentp.V383V1
RRBP1ESCAchr201763925617639256TANonsense_Mutation1
RRBP1THCAchr201759659917596599CAMissense_Mutation1
RRBP1STADchr201762254517622546-GGTCFrame_Shift_Insp.P261fs1
RRBP1HNSCchr201760095017600950CTSilent1
RRBP1HNSCchr201761050217610502GASilentp.A905A1
RRBP1LIHCchr201763970717639707AGSilent1
RRBP1BLCAchr201760240217602402AGMissense_Mutation1
RRBP1LUADchr201760251517602516AG-Frame_Shift_Delp.S1075fs1
RRBP1SKCMchr201759551817595518ATMissense_Mutationp.L920Q1
RRBP1BLCAchr201759658917596589GCSilentp.L1311L1
RRBP1CESCchr201763937817639378GTMissense_Mutation1
RRBP1PAADchr201761057017610570GAMissense_Mutation1
RRBP1SKCMchr201760826017608260GASilentp.L939L1
RRBP1CESCchr201764044117640441GANonsense_Mutationp.Q238*1
RRBP1ESCAchr201763987517639875CTSilent1
RRBP1STADchr201761725217617252GATranslation_Start_Site1
RRBP1LIHCchr201759612217596122GAMissense_Mutationp.A1335V1
RRBP1LIHCchr201764017217640172GASilent1
RRBP1LIHCchr201762370417623704C-Frame_Shift_Delp.V661fs1
RRBP1BLCAchr201761727717617277CTMissense_Mutationp.R761H1
RRBP1SARCchr201763951217639512GTSilent1
RRBP1COADchr201762374517623745TCMissense_Mutationp.Y214C1
RRBP1ESCAchr201764110717641107CANonsense_Mutation1
RRBP1THCAchr201761053517610535CTSilent1
RRBP1HNSCchr201760099217600992GASilent1
RRBP1THYMchr201763998017639980TCSilent1
RRBP1HNSCchr201762368917623689CTMissense_Mutationp.E233K1
RRBP1LIHCchr201759612017596120CAMissense_Mutation1
RRBP1BLCAchr201763929117639291TAMissense_Mutation1
RRBP1CESCchr201759658317596583GASilent1
RRBP1LUADchr201764088317640883G-Frame_Shift_Delp.P90fs1
RRBP1SKCMchr201761411617614116GASilentp.L434L1
RRBP1BLCAchr201759550517595505CGMissense_Mutationp.K1357N1
RRBP1SKCMchr201761050717610507CTMissense_Mutationp.D904N1
RRBP1CESCchr201759657617596576CGMissense_Mutationp.E1316Q1
RRBP1STADchr201760140817601410CTC-In_Frame_Delp.720_721EQ>A1
RRBP1KIRCchr201760027717600277CTSplice_Site1
RRBP1LIHCchr201763951617639516TAMissense_Mutationp.Q546L1
RRBP1LIHCchr201759546617595466CASilent1
RRBP1LIHCchr201763981717639817G-Frame_Shift_Delp.Q446fs1
RRBP1BLCAchr201764092417640924CGMissense_Mutationp.E77Q1
RRBP1LIHCchr201761619817616198CANonsense_Mutation1
RRBP1SARCchr201763926717639267GTMissense_Mutation1
RRBP1STADchr201761728917617289GAMissense_Mutationp.A324V1
RRBP1GBMchr201760823017608230CAMissense_Mutation1
RRBP1THCAchr201759659917596599CAMissense_Mutationp.R1308L1

check buttonCopy number variation (CNV) of RRBP1
* Click on the image to open the original image in a new window.
all structure

check buttonFusion gene breakpoints (product of the structural variants (SVs)) across RRBP1
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
all structure


check button Fusion genes with this translation factor from FusionGDB2.0.
FusionGDB2 IDDiseaseSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
85013N/AFN121890ANKRD30Achr1037545209+RRBP1chr2017654092-
85013CESCTCGA-EA-A4BA-01ABTBD3chr2011871602+RRBP1chr2017623772-
85013N/ABG004426C1orf132chr1207990466+RRBP1chr2017595415-
85013Non-Cancer269NCALRchr1913051701+RRBP1chr2017599324-
85013BLCATCGA-GU-A764-01ACC2D1Achr1914034624+RRBP1chr2017660720-
85013LUADTCGA-49-4512-01ACHID1chr11910775-RRBP1chr2017610606-
85013SARCTCGA-X9-A971-01ACOL3A1chr2189859057+RRBP1chr2017639251-
85013N/AAA977483CRY1chr12107446254-RRBP1chr2017639526+
85013N/ABG013671CSH1chr1761972346-RRBP1chr2017640824-
85013LGGTCGA-E1-A7Z2-01ADZANK1chr2018393290-RRBP1chr2017623772-
85013STADTCGA-HU-A4GN-01AHLCSchr2138334336-RRBP1chr2017641173-
85013BLCATCGA-FD-A3B8-01AKIF16Bchr2016474936-RRBP1chr2017641173-
85013LUADTCGA-44-3919-01AKIF16Bchr2016506737-RRBP1chr2017641173-
85013STADTCGA-VQ-A922KIF16Bchr2016553873-RRBP1chr2017660720-
85013N/AAI051667RAB11Bchr198468998-RRBP1chr2017621075+
85013STADTCGA-FP-8211-01ARPS14chr5149827221-RRBP1chr2017595519-
97972..RRBP1chr2017601015-ALKchr217601015-
95236PRADTCGA-CH-5745-01ARRBP1chr2017594323-ARFGEF2chr2047615777+
87261N/ABF848903RRBP1chr2017660713+BCL6chr3187447224-
78296OVTCGA-24-2020RRBP1chr2017660643-BFSP1chr2017505553-
78296OVTCGA-24-2020-01ARRBP1chr2017660644-BFSP1chr2017505553-
78296OVTCGA-24-2020-01ARRBP1chr2017660644-BFSP1chr2017541223-
78296OVTCGA-24-2020-01ARRBP1chr2017660644-BFSP1chr2017541428-
78296OVTCGA-24-2020-01ARRBP1chr2017660644-BFSP1chr2017543740-
78296OVTCGA-24-2020-01ARRBP1chr2017662673-BFSP1chr2017505553-
78296OVTCGA-24-2020-01ARRBP1chr2017662673-BFSP1chr2017543740-
98915LUADTCGA-49-4512-01ARRBP1chr2017614105-CHID1chr11893519-
89816Non-CancerTCGA-CG-5734-11ARRBP1chr2017640374-GRK5chr10120967304+
78296N/ACA487475RRBP1chr2017605223-LIPE-AS1chr1943059918-
101074PRADTCGA-HC-7736RRBP1chr2017662672-MACROD2chr2015843389+
101074PRADTCGA-HC-7736-01ARRBP1chr2017660644-MACROD2chr2015843390+
101074PRADTCGA-HC-7736-01ARRBP1chr2017662673-MACROD2chr2015843390+
78296STADTCGA-BR-8590-01ARRBP1chr2017639241-OVOL2chr2018005596-
78296STADTCGA-BR-8590-01ARRBP1chr2017639250-OVOL2chr2018005596-
85011STADTCGA-VQ-A922RRBP1chr2017596075-PCSK2chr2017462228+
85011STADTCGA-VQ-A922-01ARRBP1chr2017596078-PCSK2chr2017462227+
85011STADTCGA-VQ-A922-01ARRBP1chr2017596571-PCSK2chr2017462229+
81391BRCATCGA-C8-A12K-01ARRBP1chr2017660644-RBBP8chr1820491563+
85013N/ABG984836RRBP1chr2017594690-RRBP1chr2017615002-
85013N/ACB048557RRBP1chr2017596132-RRBP1chr2017641036-
85013N/ACB048558RRBP1chr2017641036+RRBP1chr2017596132+
92784N/ABC046249RRBP1chr2017600318-RUFY1chr5178977829+
83880COADTCGA-A6-2675-01ARRBP1chr2017639241-SNTA1chr2032026832-
94363STADTCGA-CG-4443RRBP1chr2017662672-SNX5chr2017937681-
94363STADTCGA-CG-4443-01ARRBP1chr2017660644-SNX5chr2017937681-
101588LUADTCGA-50-5072-01ARRBP1chr2017614105-TASP1chr2013398168-
101588LUADTCGA-91-6831RRBP1chr2017614104-TASP1chr2013398168-
102830N/AAA429648RRBP1chr2017594380+UBXN4chr2136541303-
82441PRADTCGA-HC-7077-01ARRBP1chr2017610468-VDAC3chr842257169+
78296N/AAV686345RRBP1chr2017600337-XKR3chr2217292825+
101574OVTCGA-24-2020RRBP1chr2017660643-YWHAEchr171268352-
101574OVTCGA-24-2020RRBP1chr2017660643-YWHAEchr171273035-
101574OVTCGA-24-2020RRBP1chr2017662672-YWHAEchr171268352-
101574OVTCGA-24-2020-01ARRBP1chr2017660640-YWHAEchr171268352-
101574OVTCGA-24-2020-01ARRBP1chr2017660644-YWHAEchr171268352-
101574OVTCGA-24-2020-01ARRBP1chr2017660644-YWHAEchr171273035-
101574OVTCGA-24-2020-01ARRBP1chr2017662673-YWHAEchr171268352-
85013STADTCGA-HU-A4H5SAFBchr195623405+RRBP1chr2017641173-
85013STADTCGA-D7-8575SLC24A3chr2019496208+RRBP1chr2017617374-
85015STADTCGA-KB-A93HSNX5chr2017934639-RRBP1chr2017641173-


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Prognostic Analysis


check button Kaplan-Meier plots with logrank tests of overall survival (OS)
all structure
Cancer typeTranslation factorCoefficentHazard ratioWald test pvalLikelihool ratio pvalLogrank test pval# samples


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Translation factor and Gender


check button Differential gene expression between female and male. (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
SARCRRBP10.0002266284910076960.0061
ACCRRBP10.0002644931480986810.0069
STADRRBP10.0007995542524857440.02
KIRCRRBP10.03923305110309010.94
CHOLRRBP10.04621330105669231
TGCTRRBP12.38208541342948e-050.00067

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Translation factor and Age


check button Differential gene expression between young and old age groups (Wilcoxon test, pval<0.05)
all structure
Cancer typeTranslation factorpvaladj.p
LUSCRRBP10.01412102689200650.4
GBMRRBP10.009571844598122680.28
LGGRRBP11.35063556891159e-114.5e-10
ESCARRBP10.0001651481948594850.0053
THYMRRBP10.002663119259138560.083
SARCRRBP10.0187050574998870.51
CHOLRRBP10.0483735776388041
HNSCRRBP10.004211404723754760.13

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Related Drugs


check button Drugs targeting genes involved in this translation factor.
(DrugBank Version 5.1.8 2021-05-08)
UniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
Q9P2E9DB12339RadezolidSmall moleculeInvestigational
Q9P2E9DB12339Radezolid

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Related Diseases


check button Diseases associated with this translation factor.
(DisGeNet 4.0)
Disease IDDisease Name# PubMedsDisease source